BLASTX nr result

ID: Coptis25_contig00030175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030175
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270319.1| PREDICTED: histidine kinase CKI1-like [Vitis...   132   3e-29
emb|CAN78916.1| hypothetical protein VITISV_032223 [Vitis vinifera]   132   3e-29
ref|XP_002333975.1| predicted protein [Populus trichocarpa] gi|2...   131   5e-29
ref|XP_002320976.1| predicted protein [Populus trichocarpa] gi|2...   130   8e-29
ref|XP_002319485.1| histidine kinase cytokinin receptor [Populus...   130   1e-28

>ref|XP_002270319.1| PREDICTED: histidine kinase CKI1-like [Vitis vinifera]
          Length = 1110

 Score =  132 bits (332), Expect = 3e-29
 Identities = 76/169 (44%), Positives = 100/169 (59%), Gaps = 13/169 (7%)
 Frame = -3

Query: 474  GISREKQKSVFEDFVQVKGTAHEHEGTGLGLGIVQSLVRQMGGDIGIMDKDLSERGTCFR 295
            G+ +EKQKSVFE++VQVK TA    GTGLGLGIVQSLVR MGGDIGI+DK++  +GTCFR
Sbjct: 607  GVPKEKQKSVFENYVQVKETALGTGGTGLGLGIVQSLVRLMGGDIGIVDKEIGAKGTCFR 666

Query: 294  FNIFLSSCEAAYGTSTAEGEDTRLLVDRFPTEISQNLDLNFIN-------------QSPR 154
            FNIFL++C+        E ED         +   Q LDL   +              SPR
Sbjct: 667  FNIFLTTCDTVPSDHGKE-EDIEAQGHATSSYSYQPLDLRIQSTCNPGLNILTSPRPSPR 725

Query: 153  PEGSHVVLFIERGGRRRIVQRFLQSTGARVWTVDRLEHIFHTLERITHK 7
             EGSHV++ ++   RRRI QR  ++ G +V  +   E   + L++I  K
Sbjct: 726  AEGSHVIILMQSDERRRITQRLFETLGIKVSVLKEWERFLYALKKIRRK 774


>emb|CAN78916.1| hypothetical protein VITISV_032223 [Vitis vinifera]
          Length = 1143

 Score =  132 bits (332), Expect = 3e-29
 Identities = 76/169 (44%), Positives = 100/169 (59%), Gaps = 13/169 (7%)
 Frame = -3

Query: 474  GISREKQKSVFEDFVQVKGTAHEHEGTGLGLGIVQSLVRQMGGDIGIMDKDLSERGTCFR 295
            G+ +EKQKSVFE++VQVK TA    GTGLGLGIVQSLVR MGGDIGI+DK++  +GTCFR
Sbjct: 640  GVPKEKQKSVFENYVQVKETALGTGGTGLGLGIVQSLVRLMGGDIGIVDKEIGAKGTCFR 699

Query: 294  FNIFLSSCEAAYGTSTAEGEDTRLLVDRFPTEISQNLDLNFIN-------------QSPR 154
            FNIFL++C+        E ED         +   Q LDL   +              SPR
Sbjct: 700  FNIFLTTCDTVPSDHGKE-EDIEAQGHATSSYSYQPLDLRIQSTCNPGLNILTSPRPSPR 758

Query: 153  PEGSHVVLFIERGGRRRIVQRFLQSTGARVWTVDRLEHIFHTLERITHK 7
             EGSHV++ ++   RRRI QR  ++ G +V  +   E   + L++I  K
Sbjct: 759  AEGSHVIILMQSDERRRITQRLFETLGIKVSVLKEWERFLYALKKIRRK 807


>ref|XP_002333975.1| predicted protein [Populus trichocarpa] gi|222839404|gb|EEE77741.1|
            predicted protein [Populus trichocarpa]
          Length = 1119

 Score =  131 bits (330), Expect = 5e-29
 Identities = 79/169 (46%), Positives = 106/169 (62%), Gaps = 16/169 (9%)
 Frame = -3

Query: 474  GISREKQKSVFEDFVQVKGTAHEHEGTGLGLGIVQSLVRQMGGDIGIMDKDLSERGTCFR 295
            GI +EKQKSVFE+FVQVK TA    GTGLGLGIVQSLVR MGG+IGI++K+  E+GTCF+
Sbjct: 595  GIPKEKQKSVFENFVQVKETALGQGGTGLGLGIVQSLVRLMGGEIGIVNKENGEKGTCFK 654

Query: 294  FNIFLSSCE-----------AAYGTSTAEGE-DTRLLVDRFPTE----ISQNLDLNFINQ 163
            FN+FL  CE              G S   GE +   L  R P+      + +  L+ ++ 
Sbjct: 655  FNVFLDICEIPSTDNKNAEVEIEGDSMPNGELNYSELTIRTPSPGLVIRTPSPRLSILSS 714

Query: 162  SPRPEGSHVVLFIERGGRRRIVQRFLQSTGARVWTVDRLEHIFHTLERI 16
            SP+ EGSHVVL I+   R R  Q++++  G +V +V + EH+  TL+RI
Sbjct: 715  SPKIEGSHVVLLIQNEERLRSSQKYIEGLGIKVSSVKQWEHLHSTLKRI 763


>ref|XP_002320976.1| predicted protein [Populus trichocarpa] gi|222861749|gb|EEE99291.1|
            predicted protein [Populus trichocarpa]
          Length = 1130

 Score =  130 bits (328), Expect = 8e-29
 Identities = 79/169 (46%), Positives = 105/169 (62%), Gaps = 16/169 (9%)
 Frame = -3

Query: 474  GISREKQKSVFEDFVQVKGTAHEHEGTGLGLGIVQSLVRQMGGDIGIMDKDLSERGTCFR 295
            GI +EKQKSVFE+FVQVK TA    GTGLGLGIVQSLVR MGG+IGI++K+  E+GTCF+
Sbjct: 595  GIPKEKQKSVFENFVQVKETALGQGGTGLGLGIVQSLVRLMGGEIGIVNKENGEKGTCFK 654

Query: 294  FNIFLSSCEAA-----------YGTSTAEGE-DTRLLVDRFPTE----ISQNLDLNFINQ 163
            FN+FL  CE +            G S   GE +   L  R P+      + +  L+ +  
Sbjct: 655  FNVFLDICEISSTDNKNAEVEIEGDSMPGGEHNYSELTIRTPSPGLVIRTPSPRLSILGS 714

Query: 162  SPRPEGSHVVLFIERGGRRRIVQRFLQSTGARVWTVDRLEHIFHTLERI 16
            SP+ EGSHVVL I+   R R  Q++++  G +V +V   EH+  TL+RI
Sbjct: 715  SPKIEGSHVVLLIQNEERLRSSQKYIEGLGIKVSSVKEWEHLHSTLKRI 763


>ref|XP_002319485.1| histidine kinase cytokinin receptor [Populus trichocarpa]
           gi|222857861|gb|EEE95408.1| histidine kinase cytokinin
           receptor [Populus trichocarpa]
          Length = 1001

 Score =  130 bits (326), Expect = 1e-28
 Identities = 70/156 (44%), Positives = 103/156 (66%)
 Frame = -3

Query: 474 GISREKQKSVFEDFVQVKGTAHEHEGTGLGLGIVQSLVRQMGGDIGIMDKDLSERGTCFR 295
           GI ++KQKS+FED+VQVK TA   EGTGLGLGIVQSLVR M G++ I++K+L ERGTCF+
Sbjct: 514 GIPKDKQKSLFEDYVQVKETATGQEGTGLGLGIVQSLVRVMKGELRIVEKELGERGTCFK 573

Query: 294 FNIFLSSCEAAYGTSTAEGEDTRLLVDRFPTEISQNLDLNFINQSPRPEGSHVVLFIERG 115
           FN+FLSS E      +AE E+ R          S     +F   SP+PEGSHV++FI   
Sbjct: 574 FNVFLSSVE----PKSAEPEEDRR---------SSAFHQHFPFMSPKPEGSHVIIFIPGE 620

Query: 114 GRRRIVQRFLQSTGARVWTVDRLEHIFHTLERITHK 7
            RR++++++++    +V  + ++ ++   LE++  K
Sbjct: 621 ERRKVLKKYIERLNIKVTIIKQVMNLQLELEKVKRK 656


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