BLASTX nr result

ID: Coptis25_contig00030168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030168
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542404.1| PREDICTED: uncharacterized protein LOC100776...    57   2e-06
ref|XP_003550981.1| PREDICTED: uncharacterized protein LOC100809...    56   5e-06

>ref|XP_003542404.1| PREDICTED: uncharacterized protein LOC100776940 [Glycine max]
          Length = 748

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 44/116 (37%), Positives = 57/116 (49%), Gaps = 10/116 (8%)
 Frame = -2

Query: 319 LGVIFYKNLTLASRIGPSSSIIDIKN-EIS------TNFPCIHAIACIGSNGDSFYGYID 161
           L V+F +  T   R G S  I+DI N + S      T  PC HAIA     G S Y Y  
Sbjct: 608 LQVLFSQGSTFEVR-GESVDIVDIDNWDCSCKGWQLTGVPCCHAIAVFECVGRSPYDYCS 666

Query: 160 EGYTVIAFRQCYSHSIKPVPNGFMPRRMPDSLA---VYPCSPKIGPGRPRRKELKA 2
             +TV  +R  Y+ SI PVPN   P    +S A   V P   K  PGRP+ K++++
Sbjct: 667 RYFTVENYRLTYAESIHPVPNVDKPPVQGESTALVMVIPPPTKRPPGRPKMKQVES 722


>ref|XP_003550981.1| PREDICTED: uncharacterized protein LOC100809446 [Glycine max]
          Length = 748

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 42/116 (36%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
 Frame = -2

Query: 319 LGVIFYKNLTLASRIGPSSSIIDIKN-EIS------TNFPCIHAIACIGSNGDSFYGYID 161
           L V+F +  T   R G S  I+DI N + S      T  PC HAIA     G S Y Y  
Sbjct: 608 LQVLFSQGSTFEVR-GESVDIVDIDNWDCSCKGWQLTGVPCCHAIAVFECVGRSPYDYCS 666

Query: 160 EGYTVIAFRQCYSHSIKPVPNGFMPRRMPDSLAVYPCSP---KIGPGRPRRKELKA 2
             +TV  +R  Y+ SI PVPN   P    +S ++   +P   K  PGRP+ K++++
Sbjct: 667 RYFTVENYRLTYAESIHPVPNVDKPPVQGESTSLVMVTPPPTKRPPGRPKMKQVES 722


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