BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030166
         (1731 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267249.1| PREDICTED: probable ribulose-1,5 bisphosphat...   713   0.0  
emb|CAN82664.1| hypothetical protein VITISV_015206 [Vitis vinifera]   699   0.0  
ref|XP_002311320.1| SET domain-containing protein [Populus trich...   693   0.0  
ref|XP_002522479.1| Ribulose-1,5 bisphosphate carboxylase/oxygen...   688   0.0  
ref|XP_002892783.1| hypothetical protein ARALYDRAFT_471564 [Arab...   677   0.0  

>ref|XP_002267249.1| PREDICTED: probable ribulose-1,5 bisphosphate carboxylase/oxygenase
            large subunit N-methyltransferase, chloroplastic [Vitis
            vinifera] gi|296087793|emb|CBI35049.3| unnamed protein
            product [Vitis vinifera]
          Length = 484

 Score =  713 bits (1841), Expect = 0.0
 Identities = 353/468 (75%), Positives = 400/468 (85%), Gaps = 1/468 (0%)
 Frame = -3

Query: 1651 PFSSQTNKPAFHFTKPLSINSILSPTTHTSSQAVDTFWQWVFDKGVISNKNPAVKPGIVP 1472
            P  +  N P  H  +P    + L          V TFW+W+FD+GV+S K P VKPGIVP
Sbjct: 18   PIKTLKNPPIIHSRRPPFSLTCLRSLETNPPPPVQTFWKWLFDQGVVSGKTP-VKPGIVP 76

Query: 1471 EGLGLIAQRNISKNEVVLEVPNKFWINSDTVAASEIGKFCGGLKPWVSIALFLLIEKARK 1292
            EGLGL+AQR+I++NE VLEVP +FWIN D VAASEIG  CGGLKPWVS+ALFL+ EK R 
Sbjct: 77   EGLGLVAQRDIARNEAVLEVPKRFWINPDAVAASEIGSVCGGLKPWVSVALFLIREKLRD 136

Query: 1291 DSPWRSYLDILPDATNSTLYWSEEELSELQGTQLLSTTMGAKDYVQSEFLKVEEEIILPN 1112
            +SPWRSYLDILP+ TNST+YWSEEEL E+QGTQL +TT+G K+YVQSEFLKVEEE+ILP+
Sbjct: 137  ESPWRSYLDILPEYTNSTIYWSEEELVEIQGTQLSNTTLGVKEYVQSEFLKVEEEVILPH 196

Query: 1111 KNMFP-SITFDDFLWAFGMLRSRSFSRLRGQNFVLIPLADLINHSPSITTQDSAYEIKGA 935
              +FP  +T DDFLWAFG+LRSR+FSRLRGQN VLIPLADLINHSPSITT++ A+EIKGA
Sbjct: 197  SQLFPFPVTLDDFLWAFGILRSRAFSRLRGQNLVLIPLADLINHSPSITTEEYAWEIKGA 256

Query: 934  GLFSRDLLFSLRTPVPVKAGEQVMIQYDLEKSNAELALDYGFVESRSNRSRYTLTLQISE 755
            GLFSRD LFSLRTPV VKAGEQV+IQYDL+KSNAELALDYGF+ESR NR+ YTLTL+ISE
Sbjct: 257  GLFSRDQLFSLRTPVSVKAGEQVLIQYDLDKSNAELALDYGFIESRPNRNSYTLTLEISE 316

Query: 754  SDPFFGDKLDIAETNGLGETAYFDFILGESLPPAMLPYLRLVALGGTDAFLLESIFSNSI 575
            SDPFFGDKLDIAE+NGL E AYFD +LG+SLP AMLPYLRLVALGG DAFLLESIF N+I
Sbjct: 317  SDPFFGDKLDIAESNGLSEIAYFDIVLGQSLPAAMLPYLRLVALGGPDAFLLESIFRNTI 376

Query: 574  WGHLELPVSRANEELICQVIRDACRTALSGYGTTIEEDEKLLEGGNLDPRLEVAVGIRAG 395
            WGHLELPVSRANEELICQVI+DAC++ALSGY TTIEEDEKL E GNL PRLE+AVG+R G
Sbjct: 377  WGHLELPVSRANEELICQVIQDACKSALSGYLTTIEEDEKLKEEGNLHPRLEIAVGVRTG 436

Query: 394  EKKVLDQIDGIFKDRELELDILEYYQERRLKDLGLVGEQGDIIFWEPK 251
            EKKVL QIDGIF++RE ELD LEYYQERRLKDLGL GEQG+IIFWE K
Sbjct: 437  EKKVLQQIDGIFRERERELDQLEYYQERRLKDLGLCGEQGEIIFWESK 484


>emb|CAN82664.1| hypothetical protein VITISV_015206 [Vitis vinifera]
          Length = 507

 Score =  699 bits (1805), Expect = 0.0
 Identities = 347/460 (75%), Positives = 393/460 (85%), Gaps = 1/460 (0%)
 Frame = -3

Query: 1651 PFSSQTNKPAFHFTKPLSINSILSPTTHTSSQAVDTFWQWVFDKGVISNKNPAVKPGIVP 1472
            P  +  N P  H  +P    + L          V TFW+W+FD+GV+S K P VKPGIVP
Sbjct: 18   PIKTLKNPPIIHSRRPPFSLTCLRSLETNPPPPVQTFWKWLFDQGVVSGKTP-VKPGIVP 76

Query: 1471 EGLGLIAQRNISKNEVVLEVPNKFWINSDTVAASEIGKFCGGLKPWVSIALFLLIEKARK 1292
            EGLGL+AQR+I++NE VLEVP +FWIN D VAASEIG  CGGLKPWVS+ALFL+ EK R 
Sbjct: 77   EGLGLVAQRDIARNEAVLEVPKRFWINPDAVAASEIGSVCGGLKPWVSVALFLIREKLRD 136

Query: 1291 DSPWRSYLDILPDATNSTLYWSEEELSELQGTQLLSTTMGAKDYVQSEFLKVEEEIILPN 1112
            +SPWRSYLDILP+ TNST+YWSEEEL E+QGTQL +TT+G K+YVQSEFLKVEEE+ILP+
Sbjct: 137  ESPWRSYLDILPEYTNSTIYWSEEELVEIQGTQLSNTTLGVKEYVQSEFLKVEEEVILPH 196

Query: 1111 KNMFP-SITFDDFLWAFGMLRSRSFSRLRGQNFVLIPLADLINHSPSITTQDSAYEIKGA 935
              +FP  +T DDFLWAFG+LRSR+FSRLRGQN VLIPLADLINHSPSITT++ A+EIKGA
Sbjct: 197  SQLFPFPVTLDDFLWAFGILRSRAFSRLRGQNLVLIPLADLINHSPSITTEEYAWEIKGA 256

Query: 934  GLFSRDLLFSLRTPVPVKAGEQVMIQYDLEKSNAELALDYGFVESRSNRSRYTLTLQISE 755
            GLFSRD LFSLRTPV VKAGEQV+IQYDL+KSNAELALDYGF+ESR NR+ YTLTL+ISE
Sbjct: 257  GLFSRDQLFSLRTPVSVKAGEQVLIQYDLDKSNAELALDYGFIESRPNRNSYTLTLEISE 316

Query: 754  SDPFFGDKLDIAETNGLGETAYFDFILGESLPPAMLPYLRLVALGGTDAFLLESIFSNSI 575
            SDPFFGDKLDIAE+NGL E AYFD +LG+SLP AMLPYLRLVALGG DAFLLESIF N+I
Sbjct: 317  SDPFFGDKLDIAESNGLSEIAYFDIVLGQSLPAAMLPYLRLVALGGPDAFLLESIFRNTI 376

Query: 574  WGHLELPVSRANEELICQVIRDACRTALSGYGTTIEEDEKLLEGGNLDPRLEVAVGIRAG 395
            WGHLELPVSRANEELICQVI+DAC++ALSGY TTIEEDEKL E GNL PRLE+AVG+R G
Sbjct: 377  WGHLELPVSRANEELICQVIQDACKSALSGYLTTIEEDEKLKEEGNLHPRLEIAVGVRTG 436

Query: 394  EKKVLDQIDGIFKDRELELDILEYYQERRLKDLGLVGEQG 275
            EKKVL QIDGIF++RE ELD LEYYQERRLKDLGL GEQG
Sbjct: 437  EKKVLQQIDGIFRERERELDQLEYYQERRLKDLGLCGEQG 476


>ref|XP_002311320.1| SET domain-containing protein [Populus trichocarpa]
            gi|222851140|gb|EEE88687.1| SET domain-containing protein
            [Populus trichocarpa]
          Length = 490

 Score =  693 bits (1788), Expect = 0.0
 Identities = 342/482 (70%), Positives = 405/482 (84%), Gaps = 15/482 (3%)
 Frame = -3

Query: 1660 PLKPFSSQT---NKPAFHFTKPLSINSILSPTTHTSSQAVDTFWQWVFDKGVISNKNPAV 1490
            P KPF + T     P+ HF KPLS+ S  SP    ++ AV TFWQW+ D+ V+S K PA 
Sbjct: 11   PSKPFKNSTFFTKNPSLHFKKPLSVTSFQSPPAAAAAAAVQTFWQWLSDQDVVSAKTPA- 69

Query: 1489 KPGIVPEGLGLIAQRNISKNEVVLEVPNKFWINSDTVAASEIGKFCGGLKPWVSIALFLL 1310
            +PG+VP+GLGL+AQR+IS+NEVVLE+P K WIN D VAASEIG  CGG+KPWVS+ALFL+
Sbjct: 70   RPGLVPQGLGLVAQRDISRNEVVLEIPKKLWINPDVVAASEIGNVCGGVKPWVSVALFLI 129

Query: 1309 IEKARKDSPWRSYLDILPDATNSTLYWSEEELSELQGTQLLSTTMGAKDYVQSEFLKVEE 1130
             EK ++DS WR YLD+LP++TNST++WSEEEL+ELQGTQLLSTT+G K Y++ EFLKVEE
Sbjct: 130  REKLKEDSTWRPYLDVLPESTNSTIFWSEEELAELQGTQLLSTTLGVKSYLRREFLKVEE 189

Query: 1129 EIILPNKNMFPS-ITFDDFLWAFGMLRSRSFSRLRGQNFVLIPLADL-----------IN 986
            EI++P+K +FPS +T DDF WAFG+LRSRSFSRLRGQN VLIPLADL           +N
Sbjct: 190  EILVPHKQLFPSPVTLDDFSWAFGILRSRSFSRLRGQNLVLIPLADLCNFLHTWLLDQVN 249

Query: 985  HSPSITTQDSAYEIKGAGLFSRDLLFSLRTPVPVKAGEQVMIQYDLEKSNAELALDYGFV 806
            HSP IT +D  YEIKGAGLFSRDL+FSLR+P+ +KAGEQV+IQY+L  SNAELA+DYGF+
Sbjct: 250  HSPDITIEDGVYEIKGAGLFSRDLIFSLRSPISLKAGEQVLIQYNLNLSNAELAVDYGFI 309

Query: 805  ESRSNRSRYTLTLQISESDPFFGDKLDIAETNGLGETAYFDFILGESLPPAMLPYLRLVA 626
            E++S+R+ YTLTLQISESDPFFGDKLDIAETNGLGE A FD +LG  LPP +LPYLRLVA
Sbjct: 310  EAKSDRNMYTLTLQISESDPFFGDKLDIAETNGLGEIADFDIVLGNPLPPTLLPYLRLVA 369

Query: 625  LGGTDAFLLESIFSNSIWGHLELPVSRANEELICQVIRDACRTALSGYGTTIEEDEKLLE 446
            LGGTD+FLLESIF N+IWGHLELPVSRANEELIC+V+RDAC++ALSGY TTIEEDEK L+
Sbjct: 370  LGGTDSFLLESIFRNTIWGHLELPVSRANEELICRVVRDACKSALSGYHTTIEEDEK-LK 428

Query: 445  GGNLDPRLEVAVGIRAGEKKVLDQIDGIFKDRELELDILEYYQERRLKDLGLVGEQGDII 266
            G  L+PRLE+AVGIRAGEKKVL QI+ IFK R+ ELD LEYYQERRLKDLGLVGEQG+II
Sbjct: 429  GEELNPRLEIAVGIRAGEKKVLQQIEEIFKQRQSELDELEYYQERRLKDLGLVGEQGEII 488

Query: 265  FW 260
            FW
Sbjct: 489  FW 490


>ref|XP_002522479.1| Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit
            N-methyltransferase, chloroplast precursor, putative
            [Ricinus communis] gi|223538364|gb|EEF39971.1|
            Ribulose-1,5 bisphosphate carboxylase/oxygenase large
            subunit N-methyltransferase, chloroplast precursor,
            putative [Ricinus communis]
          Length = 502

 Score =  688 bits (1775), Expect = 0.0
 Identities = 348/490 (71%), Positives = 403/490 (82%), Gaps = 20/490 (4%)
 Frame = -3

Query: 1660 PLKPFSSQTNKPAFHFTKPLSI-NSILSPTTHTSSQAVDTFWQWVFDKGVISNKNPAVKP 1484
            PLKPFS  T  P+FH  KP  I +S L  +     Q+++ FWQW+ D+GV+S K+PA KP
Sbjct: 15   PLKPFSPVTKIPSFHLKKPFFITSSSLQSSATAPPQSLEIFWQWLSDQGVVSGKSPA-KP 73

Query: 1483 GIVPEGLGLIAQRNISKNEVVLEVPNKFWINSDTVAASEIGKFCGGLKPWVSIALFLLIE 1304
            G+V EGLGLIA+R+I++NEVVLE+P K WIN D VAAS+IG  C GLKPW+S+ALFL+ E
Sbjct: 74   GVVKEGLGLIAERDIARNEVVLEIPKKLWINPDAVAASDIGNVCSGLKPWISVALFLIRE 133

Query: 1303 KARKD-SPWRSYLDILPDATNSTLYW-----------------SEEELSELQGTQLLSTT 1178
            K +K+ S W  YLDILPD TNST+YW                 SEEEL+ELQGTQLL TT
Sbjct: 134  KLKKEGSTWWPYLDILPDTTNSTIYWWVLLVAFYVLVLSFQRRSEEELAELQGTQLLRTT 193

Query: 1177 MGAKDYVQSEFLKVEEEIILPNKNMFPS-ITFDDFLWAFGMLRSRSFSRLRGQNFVLIPL 1001
            +G K+Y+Q EF KVEEEI+LP+K +FPS IT DDFLWAFG+LRSR+FSRLRGQN VLIPL
Sbjct: 194  LGVKEYMQREFAKVEEEILLPHKELFPSPITLDDFLWAFGILRSRAFSRLRGQNLVLIPL 253

Query: 1000 ADLINHSPSITTQDSAYEIKGAGLFSRDLLFSLRTPVPVKAGEQVMIQYDLEKSNAELAL 821
            ADLINHSP ITT+D AYEIKG GLFSR+LLFSLR+P+ VK+GEQV+IQYDL KSNAELAL
Sbjct: 254  ADLINHSPDITTEDYAYEIKGGGLFSRELLFSLRSPISVKSGEQVLIQYDLNKSNAELAL 313

Query: 820  DYGFVESRSNRSRYTLTLQISESDPFFGDKLDIAETNGLGETAYFDFILGESLPPAMLPY 641
            DYGF+E   +R+ YTLTLQISESDPFFGDKLDIAETNG GETA FD +LG  LPPAMLPY
Sbjct: 314  DYGFIEKTPDRNTYTLTLQISESDPFFGDKLDIAETNGSGETADFDIVLGNPLPPAMLPY 373

Query: 640  LRLVALGGTDAFLLESIFSNSIWGHLELPVSRANEELICQVIRDACRTALSGYGTTIEED 461
            LRLVALGGTDAFLLESIF N+IWGHLELP+SRANEELIC+V+RDAC++ALSGY TTIEED
Sbjct: 374  LRLVALGGTDAFLLESIFRNTIWGHLELPISRANEELICRVVRDACKSALSGYHTTIEED 433

Query: 460  EKLLEGGNLDPRLEVAVGIRAGEKKVLDQIDGIFKDRELELDILEYYQERRLKDLGLVGE 281
            EK LE  +L+PRLE+AVGIRAGEKKVL QI+ +FK RE ELD  EYYQERRLK+LGLVGE
Sbjct: 434  EK-LEAADLNPRLEIAVGIRAGEKKVLQQINDVFKQRESELDEFEYYQERRLKELGLVGE 492

Query: 280  QGDIIFWEPK 251
            QG+IIFWE K
Sbjct: 493  QGEIIFWESK 502


>ref|XP_002892783.1| hypothetical protein ARALYDRAFT_471564 [Arabidopsis lyrata subsp.
            lyrata] gi|297338625|gb|EFH69042.1| hypothetical protein
            ARALYDRAFT_471564 [Arabidopsis lyrata subsp. lyrata]
          Length = 482

 Score =  677 bits (1746), Expect = 0.0
 Identities = 332/471 (70%), Positives = 405/471 (85%), Gaps = 4/471 (0%)
 Frame = -3

Query: 1651 PFSSQTNKPAFHFTKPLSINSILSPTTHTSSQA---VDTFWQWVFDKGVISNKNPAVKPG 1481
            P   ++  P+  F++P    S++ P +  SS+    V  FW+W+ D+GV+S K+PA +P 
Sbjct: 15   PSIQKSRNPSLLFSRPKK--SLVRPISALSSELPENVRNFWKWLGDQGVVSGKSPA-EPA 71

Query: 1480 IVPEGLGLIAQRNISKNEVVLEVPNKFWINSDTVAASEIGKFCGGLKPWVSIALFLLIEK 1301
            +VPEGLGL+A+R+I +NEVVLE+P + WIN +TV AS+IG  CGGLKPWVS+ALFL+ EK
Sbjct: 72   VVPEGLGLVARRDIGRNEVVLEIPKRLWINPETVTASKIGPLCGGLKPWVSVALFLIREK 131

Query: 1300 ARKDSPWRSYLDILPDATNSTLYWSEEELSELQGTQLLSTTMGAKDYVQSEFLKVEEEII 1121
              ++S WR YLD+LP +T+ST++WSEEEL+EL+GTQLLSTT+G K+YV++EFLK+E+EI+
Sbjct: 132  YEEESSWRLYLDMLPQSTDSTVFWSEEELAELKGTQLLSTTLGVKEYVENEFLKLEQEIL 191

Query: 1120 LPNKNMFPS-ITFDDFLWAFGMLRSRSFSRLRGQNFVLIPLADLINHSPSITTQDSAYEI 944
            LPNK++F S IT DDF+WAFG+L+SR+FSRLRGQN VLIPLADLINH+P+ITT+D AYEI
Sbjct: 192  LPNKDLFSSRITLDDFIWAFGILKSRAFSRLRGQNLVLIPLADLINHNPAITTEDYAYEI 251

Query: 943  KGAGLFSRDLLFSLRTPVPVKAGEQVMIQYDLEKSNAELALDYGFVESRSNRSRYTLTLQ 764
            KGAGLFSRDLLFSL++PV VKAGEQV IQYDL KSNAELALDYGFVES  NR+ YTLT++
Sbjct: 252  KGAGLFSRDLLFSLKSPVYVKAGEQVYIQYDLNKSNAELALDYGFVESNPNRNSYTLTIE 311

Query: 763  ISESDPFFGDKLDIAETNGLGETAYFDFILGESLPPAMLPYLRLVALGGTDAFLLESIFS 584
            I ESDPFFGDKLDIAETN +GET YFD + G++LP  ML YLRLVALGG+DAFLLESIF+
Sbjct: 312  IPESDPFFGDKLDIAETNKMGETGYFDVVDGQTLPAGMLQYLRLVALGGSDAFLLESIFN 371

Query: 583  NSIWGHLELPVSRANEELICQVIRDACRTALSGYGTTIEEDEKLLEGGNLDPRLEVAVGI 404
            N+IWGHLELPVSR+NEELIC+V+RDAC++ALSG+ TTIEEDEKLLE G LDPRLE+A+ I
Sbjct: 372  NTIWGHLELPVSRSNEELICRVVRDACKSALSGFSTTIEEDEKLLEEGKLDPRLEMALKI 431

Query: 403  RAGEKKVLDQIDGIFKDRELELDILEYYQERRLKDLGLVGEQGDIIFWEPK 251
            R GEK+VL QID IFKDRELELD+LEYYQERRLKDLGLVGEQGDIIFWE K
Sbjct: 432  RIGEKRVLQQIDQIFKDRELELDVLEYYQERRLKDLGLVGEQGDIIFWETK 482