BLASTX nr result
ID: Coptis25_contig00030154
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00030154 (344 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002524384.1| conserved hypothetical protein [Ricinus comm... 103 1e-20 ref|XP_003631229.1| PREDICTED: uncharacterized protein LOC100262... 97 1e-18 emb|CAN74875.1| hypothetical protein VITISV_038922 [Vitis vinifera] 97 1e-18 ref|XP_002315967.1| predicted protein [Populus trichocarpa] gi|2... 96 2e-18 dbj|BAK00452.1| predicted protein [Hordeum vulgare subsp. vulgare] 95 7e-18 >ref|XP_002524384.1| conserved hypothetical protein [Ricinus communis] gi|223536345|gb|EEF37995.1| conserved hypothetical protein [Ricinus communis] Length = 255 Score = 103 bits (258), Expect = 1e-20 Identities = 48/53 (90%), Positives = 52/53 (98%) Frame = +1 Query: 1 GVLPGKGAGSEGELMYMRAKFERVVGSRDSEAFYMMNPDGSGGPELSIYLLRV 159 GVLPG GAGS+GELMYMRA+FERVVGS+DSEAFYMMNPDGSGGPELS+YLLRV Sbjct: 203 GVLPGNGAGSDGELMYMRARFERVVGSKDSEAFYMMNPDGSGGPELSVYLLRV 255 >ref|XP_003631229.1| PREDICTED: uncharacterized protein LOC100262757 [Vitis vinifera] gi|297737883|emb|CBI27084.3| unnamed protein product [Vitis vinifera] Length = 262 Score = 97.1 bits (240), Expect = 1e-18 Identities = 48/54 (88%), Positives = 50/54 (92%), Gaps = 1/54 (1%) Frame = +1 Query: 1 GVLPGKG-AGSEGELMYMRAKFERVVGSRDSEAFYMMNPDGSGGPELSIYLLRV 159 GVLPG G GSEGELMYMRAKFERVVGS+DSEAFYMMNPD +GGPELSIYLLRV Sbjct: 209 GVLPGNGETGSEGELMYMRAKFERVVGSKDSEAFYMMNPDSTGGPELSIYLLRV 262 >emb|CAN74875.1| hypothetical protein VITISV_038922 [Vitis vinifera] Length = 248 Score = 97.1 bits (240), Expect = 1e-18 Identities = 48/54 (88%), Positives = 50/54 (92%), Gaps = 1/54 (1%) Frame = +1 Query: 1 GVLPGKG-AGSEGELMYMRAKFERVVGSRDSEAFYMMNPDGSGGPELSIYLLRV 159 GVLPG G GSEGELMYMRAKFERVVGS+DSEAFYMMNPD +GGPELSIYLLRV Sbjct: 195 GVLPGNGETGSEGELMYMRAKFERVVGSKDSEAFYMMNPDSTGGPELSIYLLRV 248 >ref|XP_002315967.1| predicted protein [Populus trichocarpa] gi|222865007|gb|EEF02138.1| predicted protein [Populus trichocarpa] Length = 263 Score = 96.3 bits (238), Expect = 2e-18 Identities = 50/55 (90%), Positives = 52/55 (94%), Gaps = 2/55 (3%) Frame = +1 Query: 1 GVLPGKGA-GSE-GELMYMRAKFERVVGSRDSEAFYMMNPDGSGGPELSIYLLRV 159 GVLPG GA GSE GELMYMRA+FERVVGS+DSEAFYMMNPDGSGGPELSIYLLRV Sbjct: 209 GVLPGNGAAGSEIGELMYMRARFERVVGSKDSEAFYMMNPDGSGGPELSIYLLRV 263 >dbj|BAK00452.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 258 Score = 94.7 bits (234), Expect = 7e-18 Identities = 48/55 (87%), Positives = 49/55 (89%), Gaps = 2/55 (3%) Frame = +1 Query: 1 GVLPGKGAGS--EGELMYMRAKFERVVGSRDSEAFYMMNPDGSGGPELSIYLLRV 159 GVLP GA EG+LMYMRAKFERVVGSRDSEAFYMMNPDGSGGPELSIYLLRV Sbjct: 204 GVLPDDGAAGAGEGDLMYMRAKFERVVGSRDSEAFYMMNPDGSGGPELSIYLLRV 258