BLASTX nr result

ID: Coptis25_contig00030143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030143
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278468.2| PREDICTED: kinesin-4-like [Vitis vinifera]        132   2e-29
emb|CBI39561.3| unnamed protein product [Vitis vinifera]              132   2e-29
emb|CAN74504.1| hypothetical protein VITISV_015888 [Vitis vinifera]   132   2e-29
ref|XP_002523135.1| kinesin heavy chain, putative [Ricinus commu...   124   1e-26
ref|XP_002318969.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26

>ref|XP_002278468.2| PREDICTED: kinesin-4-like [Vitis vinifera]
          Length = 1056

 Score =  132 bits (333), Expect = 2e-29
 Identities = 73/142 (51%), Positives = 103/142 (72%), Gaps = 2/142 (1%)
 Frame = +3

Query: 3    LLFQRHVLD-SRVYPEQPYNKLTSTKMDTRAYDIQRSRFDIATTDDSDELEVATSDSSEP 179
            + FQ H+ + +++YPEQP+NK ++ + D R YD QR+RF++A TDDSDELE ATSD SE 
Sbjct: 921  MFFQTHLPNPAKIYPEQPFNKFSTNQKDGRDYDGQRNRFEVA-TDDSDELEAATSDCSEQ 979

Query: 180  DLLW-QFNLPKVTSLSNGVGSKIKKPHSKLVKSPDISAVNRSSVPTFGPSPSRKLLNGVA 356
            DLLW Q NLP+V+++ NG+GSK K+ +SKLVKSP+     RS +P+ G S SRKL  G++
Sbjct: 980  DLLWQQLNLPRVSNIPNGLGSKNKRTNSKLVKSPE----KRSLIPSLGTSASRKLPIGIS 1035

Query: 357  QSSHRNGRPVSGNVKRKTGNGK 422
               HR  + V+ + K++TGN K
Sbjct: 1036 PPLHRR-QAVAVDGKQRTGNAK 1056


>emb|CBI39561.3| unnamed protein product [Vitis vinifera]
          Length = 1044

 Score =  132 bits (333), Expect = 2e-29
 Identities = 73/142 (51%), Positives = 103/142 (72%), Gaps = 2/142 (1%)
 Frame = +3

Query: 3    LLFQRHVLD-SRVYPEQPYNKLTSTKMDTRAYDIQRSRFDIATTDDSDELEVATSDSSEP 179
            + FQ H+ + +++YPEQP+NK ++ + D R YD QR+RF++A TDDSDELE ATSD SE 
Sbjct: 909  MFFQTHLPNPAKIYPEQPFNKFSTNQKDGRDYDGQRNRFEVA-TDDSDELEAATSDCSEQ 967

Query: 180  DLLW-QFNLPKVTSLSNGVGSKIKKPHSKLVKSPDISAVNRSSVPTFGPSPSRKLLNGVA 356
            DLLW Q NLP+V+++ NG+GSK K+ +SKLVKSP+     RS +P+ G S SRKL  G++
Sbjct: 968  DLLWQQLNLPRVSNIPNGLGSKNKRTNSKLVKSPE----KRSLIPSLGTSASRKLPIGIS 1023

Query: 357  QSSHRNGRPVSGNVKRKTGNGK 422
               HR  + V+ + K++TGN K
Sbjct: 1024 PPLHRR-QAVAVDGKQRTGNAK 1044


>emb|CAN74504.1| hypothetical protein VITISV_015888 [Vitis vinifera]
          Length = 1058

 Score =  132 bits (333), Expect = 2e-29
 Identities = 73/142 (51%), Positives = 103/142 (72%), Gaps = 2/142 (1%)
 Frame = +3

Query: 3    LLFQRHVLD-SRVYPEQPYNKLTSTKMDTRAYDIQRSRFDIATTDDSDELEVATSDSSEP 179
            + FQ H+ + +++YPEQP+NK ++ + D R YD QR+RF++A TDDSDELE ATSD SE 
Sbjct: 923  MFFQTHLPNPAKIYPEQPFNKFSTNQKDGRDYDGQRNRFEVA-TDDSDELEAATSDCSEQ 981

Query: 180  DLLW-QFNLPKVTSLSNGVGSKIKKPHSKLVKSPDISAVNRSSVPTFGPSPSRKLLNGVA 356
            DLLW Q NLP+V+++ NG+GSK K+ +SKLVKSP+     RS +P+ G S SRKL  G++
Sbjct: 982  DLLWQQLNLPRVSNIPNGLGSKNKRTNSKLVKSPE----KRSLIPSLGTSASRKLPIGIS 1037

Query: 357  QSSHRNGRPVSGNVKRKTGNGK 422
               HR  + V+ + K++TGN K
Sbjct: 1038 PPLHRR-QAVAVDGKQRTGNAK 1058


>ref|XP_002523135.1| kinesin heavy chain, putative [Ricinus communis]
            gi|223537697|gb|EEF39320.1| kinesin heavy chain, putative
            [Ricinus communis]
          Length = 1012

 Score =  124 bits (310), Expect = 1e-26
 Identities = 67/142 (47%), Positives = 91/142 (64%), Gaps = 2/142 (1%)
 Frame = +3

Query: 3    LLFQRHVLDS-RVYPEQPYNKLTSTKMDTRAYDIQRSRFDIATTDDSDELEVATSDSSEP 179
            + +Q+++ DS R+YPEQ YN  T             +RF+++ TDD D+L+  TSDSSEP
Sbjct: 886  VFYQKYLSDSSRIYPEQSYNMFTGN-----------NRFNMSNTDDIDDLDAGTSDSSEP 934

Query: 180  DLLWQFNLPKVTSLSNGVGSKIKKPHSKLVKSPDISAVNRSSVPTFGPSPSRKLLNGVAQ 359
            DLLWQFN  K++  + G+ SK KKP+SK  K+ D+  +N    P  GPSPSRKL NGV  
Sbjct: 935  DLLWQFNQSKLSGTAYGIESKTKKPNSKATKNSDLRNLN----PMLGPSPSRKLPNGVGV 990

Query: 360  SSHRNGR-PVSGNVKRKTGNGK 422
              HR+GR P   ++KR+TGN K
Sbjct: 991  PQHRSGRQPAPVDMKRRTGNRK 1012


>ref|XP_002318969.1| predicted protein [Populus trichocarpa] gi|222857345|gb|EEE94892.1|
            predicted protein [Populus trichocarpa]
          Length = 981

 Score =  122 bits (307), Expect = 2e-26
 Identities = 72/145 (49%), Positives = 100/145 (68%), Gaps = 5/145 (3%)
 Frame = +3

Query: 3    LLFQRHVLD-SRVYPEQPYNKLTSTKMDTRAYDIQRSRFDIATTDDSDELEVATSDSSEP 179
            + +Q +  D S++YPEQPY    +T+ D++ YD QR RF++A+TD+SDELE ATSDSSEP
Sbjct: 842  MFYQSYARDPSKIYPEQPYKSSPNTR-DSQEYDAQRGRFEMASTDESDELEAATSDSSEP 900

Query: 180  DLLWQFNLPKVTSLSNG--VGSKIKK-PHSKLVKSPDISAVNRSSVPTFGPSPSRKLLNG 350
            DLLWQ N+P+++SL N   +GSK KK  + +  KS +     RS +P+  PSPSRKL NG
Sbjct: 901  DLLWQSNIPRMSSLPNPNVLGSKTKKTTNPRGFKSTE----TRSLIPSLIPSPSRKLPNG 956

Query: 351  VAQSSHRNGRP-VSGNVKRKTGNGK 422
             +   ++ GR  VS + KRKTG+ K
Sbjct: 957  ASPGLNKPGRQLVSVDGKRKTGHAK 981


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