BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030095
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containi...   187   6e-46
ref|XP_002443909.1| hypothetical protein SORBIDRAFT_07g004200 [S...   186   2e-45
gb|AFW57243.1| hypothetical protein ZEAMMB73_018964 [Zea mays]        185   4e-45
ref|XP_002314181.1| predicted protein [Populus trichocarpa] gi|2...   184   7e-45
ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containi...   184   9e-45

>ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
           mitochondrial [Vitis vinifera]
          Length = 550

 Score =  187 bits (476), Expect = 6e-46
 Identities = 88/133 (66%), Positives = 112/133 (84%)
 Frame = -3

Query: 400 LGKEDELERTLGVIQKLPHVRYKSFVLAIEAFGRLGRLDRVEELWLEMKSTKHINSTEHF 221
           LGK  +LERT G++Q+LPHVR KS++LAIEAFGR+G+L+R EELWLE+KS K + STE F
Sbjct: 335 LGKPTDLERTWGIVQELPHVRSKSYMLAIEAFGRIGQLNRAEELWLEIKSKKELKSTEQF 394

Query: 220 NSIISVYCRRGLIDKASKVFKEMETNGCRPNAITYRHLTLGCLKAGLVEEALKTLEVGMD 41
           NS+ISVY + G IDKAS +F+EME NGC+ NAITYR+L LGCLKAGL+EEALKTLE+G  
Sbjct: 395 NSMISVYSKHGFIDKASGLFREMEMNGCKANAITYRNLALGCLKAGLLEEALKTLELGKG 454

Query: 40  KTITSTVKRSTPW 2
            TI++ +++S PW
Sbjct: 455 LTISTRIRKSIPW 467


>ref|XP_002443909.1| hypothetical protein SORBIDRAFT_07g004200 [Sorghum bicolor]
           gi|241940259|gb|EES13404.1| hypothetical protein
           SORBIDRAFT_07g004200 [Sorghum bicolor]
          Length = 521

 Score =  186 bits (471), Expect = 2e-45
 Identities = 83/133 (62%), Positives = 110/133 (82%)
 Frame = -3

Query: 400 LGKEDELERTLGVIQKLPHVRYKSFVLAIEAFGRLGRLDRVEELWLEMKSTKHINSTEHF 221
           LGKE EL+RT  ++Q LPHVR KSF +AIEAFG++G +D+ E++W+++KSTK ++ TE F
Sbjct: 306 LGKEKELKRTWEIMQDLPHVRSKSFTVAIEAFGKVGSIDQAEKIWVQIKSTKKLSLTEQF 365

Query: 220 NSIISVYCRRGLIDKASKVFKEMETNGCRPNAITYRHLTLGCLKAGLVEEALKTLEVGMD 41
           NSI+SVYCR G++DKAS VFKEM  NGC+PNAITYRHL LGCLK+GLV+EAL T+++G  
Sbjct: 366 NSILSVYCRHGVVDKASSVFKEMRANGCQPNAITYRHLALGCLKSGLVKEALNTIDMGKK 425

Query: 40  KTITSTVKRSTPW 2
           + +T  V+ STPW
Sbjct: 426 EVVTKKVRSSTPW 438


>gb|AFW57243.1| hypothetical protein ZEAMMB73_018964 [Zea mays]
          Length = 514

 Score =  185 bits (469), Expect = 4e-45
 Identities = 82/133 (61%), Positives = 109/133 (81%)
 Frame = -3

Query: 400 LGKEDELERTLGVIQKLPHVRYKSFVLAIEAFGRLGRLDRVEELWLEMKSTKHINSTEHF 221
           LGKE EL+RT  ++Q LPH+R KSF LAIEAFG++G +D+ E++W+ +KSTK ++ TE F
Sbjct: 299 LGKEKELKRTWEIMQDLPHIRSKSFTLAIEAFGKVGSIDQAEKIWIHIKSTKKLSLTEQF 358

Query: 220 NSIISVYCRRGLIDKASKVFKEMETNGCRPNAITYRHLTLGCLKAGLVEEALKTLEVGMD 41
           NS++SVYCR G++DKAS VFKEM  NGC+PNAITYRHL LGCLK+GLV+EAL T+++G  
Sbjct: 359 NSMLSVYCRHGVVDKASSVFKEMRANGCQPNAITYRHLALGCLKSGLVKEALNTIDMGKK 418

Query: 40  KTITSTVKRSTPW 2
           + +T  V+ STPW
Sbjct: 419 EVVTKKVRSSTPW 431


>ref|XP_002314181.1| predicted protein [Populus trichocarpa] gi|222850589|gb|EEE88136.1|
           predicted protein [Populus trichocarpa]
          Length = 525

 Score =  184 bits (467), Expect = 7e-45
 Identities = 87/133 (65%), Positives = 109/133 (81%)
 Frame = -3

Query: 400 LGKEDELERTLGVIQKLPHVRYKSFVLAIEAFGRLGRLDRVEELWLEMKSTKHINSTEHF 221
           LGKE ELERT G++ +LPHVR KS++LAIEA+G++G+L R EELWLEMKS   + STE F
Sbjct: 310 LGKEKELERTWGIVLELPHVRSKSYMLAIEAYGKIGQLSRAEELWLEMKSIHGLRSTEQF 369

Query: 220 NSIISVYCRRGLIDKASKVFKEMETNGCRPNAITYRHLTLGCLKAGLVEEALKTLEVGMD 41
           NS++SVYC+ GLI KA+  F+EME NGC+ N+IT+RHL LGCLKA LVEEALKTLE+G +
Sbjct: 370 NSMLSVYCKHGLIKKATGNFREMEINGCKANSITFRHLALGCLKANLVEEALKTLEMGKN 429

Query: 40  KTITSTVKRSTPW 2
            T ++ VK STPW
Sbjct: 430 LTTSNRVKNSTPW 442


>ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
           mitochondrial-like [Cucumis sativus]
           gi|449517541|ref|XP_004165804.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g07590,
           mitochondrial-like [Cucumis sativus]
          Length = 527

 Score =  184 bits (466), Expect = 9e-45
 Identities = 87/134 (64%), Positives = 109/134 (81%), Gaps = 1/134 (0%)
 Frame = -3

Query: 400 LGKEDELERTLGVIQKLPHVRYKSFVLAIEAFGRLGRLDRVEELWLEMKSTKHINSTEHF 221
           L KE ELERT G+IQ  PH+  KSF+LAIEAFGR+G L R EELWLEMK+ + I +T+ F
Sbjct: 311 LNKEKELERTWGIIQGFPHIPSKSFILAIEAFGRIGLLSRAEELWLEMKTKRGIKATDQF 370

Query: 220 NSIISVYCRRGLIDKASKVFKEMETNGCRPNAITYRHLTLGCLKAGLVEEALKTLEVGMD 41
           NSI+SVYCR GLI KA+++F+++E NGC+PNAIT+RHL  GCLKAGLVEEALKTL++G +
Sbjct: 371 NSILSVYCRHGLIKKATEIFRKIEANGCKPNAITFRHLAFGCLKAGLVEEALKTLDLGSN 430

Query: 40  KT-ITSTVKRSTPW 2
            T  T  V++STPW
Sbjct: 431 TTSSTKIVRKSTPW 444