BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030087
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525134.1| pentatricopeptide repeat-containing protein,...    59   5e-07
gb|EAZ13579.1| hypothetical protein OsJ_03496 [Oryza sativa Japo...    59   7e-07
ref|NP_001172571.1| Os01g0754701 [Oryza sativa Japonica Group] g...    59   7e-07
ref|XP_002276142.2| PREDICTED: pentatricopeptide repeat-containi...    58   1e-06
ref|XP_002458507.1| hypothetical protein SORBIDRAFT_03g034905 [S...    56   3e-06

>ref|XP_002525134.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535593|gb|EEF37261.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 792

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 24/37 (64%), Positives = 30/37 (81%)
 Frame = -2

Query: 557 GHLKEAEKLISGMPFQPNVVIWRTFLEGCRRYSDVEE 447
           GH+KEAEK+IS MP  PN +IWRTFLEGC++Y   E+
Sbjct: 696 GHVKEAEKVISSMPCPPNALIWRTFLEGCKKYRSKED 732


>gb|EAZ13579.1| hypothetical protein OsJ_03496 [Oryza sativa Japonica Group]
          Length = 626

 Score = 58.5 bits (140), Expect = 7e-07
 Identities = 23/36 (63%), Positives = 30/36 (83%)
 Frame = -2

Query: 557 GHLKEAEKLISGMPFQPNVVIWRTFLEGCRRYSDVE 450
           GHLKEAE +I GMPFQP+ V+WRTFL+GC+ Y  ++
Sbjct: 586 GHLKEAEVVIRGMPFQPSAVVWRTFLQGCQTYGMID 621


>ref|NP_001172571.1| Os01g0754701 [Oryza sativa Japonica Group]
           gi|57900338|dbj|BAD87291.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|125527747|gb|EAY75861.1| hypothetical protein
           OsI_03779 [Oryza sativa Indica Group]
           gi|255673696|dbj|BAH91301.1| Os01g0754701 [Oryza sativa
           Japonica Group]
          Length = 663

 Score = 58.5 bits (140), Expect = 7e-07
 Identities = 23/36 (63%), Positives = 30/36 (83%)
 Frame = -2

Query: 557 GHLKEAEKLISGMPFQPNVVIWRTFLEGCRRYSDVE 450
           GHLKEAE +I GMPFQP+ V+WRTFL+GC+ Y  ++
Sbjct: 623 GHLKEAEVVIRGMPFQPSAVVWRTFLQGCQTYGMID 658


>ref|XP_002276142.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g58590-like [Vitis vinifera]
          Length = 921

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 23/36 (63%), Positives = 30/36 (83%)
 Frame = -2

Query: 557 GHLKEAEKLISGMPFQPNVVIWRTFLEGCRRYSDVE 450
           GHL+EAE++IS MPF PN +IWR+FLEGC+R+   E
Sbjct: 735 GHLQEAEQVISNMPFPPNALIWRSFLEGCKRWKTAE 770


>ref|XP_002458507.1| hypothetical protein SORBIDRAFT_03g034905 [Sorghum bicolor]
           gi|241930482|gb|EES03627.1| hypothetical protein
           SORBIDRAFT_03g034905 [Sorghum bicolor]
          Length = 563

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 23/32 (71%), Positives = 28/32 (87%)
 Frame = -2

Query: 557 GHLKEAEKLISGMPFQPNVVIWRTFLEGCRRY 462
           G+LKEAE +I GMPFQP+ VIWRTFL+GC+ Y
Sbjct: 532 GYLKEAEVVIRGMPFQPSTVIWRTFLQGCKTY 563