BLASTX nr result

ID: Coptis25_contig00030069 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030069
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141747.1| PREDICTED: GATA transcription factor 24-like...   105   3e-21
ref|XP_004159006.1| PREDICTED: GATA transcription factor 24-like...   104   7e-21
ref|XP_002316441.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
gb|AAK76580.1| putative flowering protein CONSTANS [Arabidopsis ...    97   2e-18
ref|NP_564593.1| GATA transcription factor 28 [Arabidopsis thali...    97   2e-18

>ref|XP_004141747.1| PREDICTED: GATA transcription factor 24-like [Cucumis sativus]
          Length = 299

 Score =  105 bits (263), Expect = 3e-21
 Identities = 58/117 (49%), Positives = 71/117 (60%), Gaps = 3/117 (2%)
 Frame = -2

Query: 537 MKRQKGQFASSKPTYAGFTSILSCDSSN--WSSDVNESQQESTCCQ-CGLSEKSTPMMRR 367
           M+R KGQF SSKP +   +  ++    N  WSSD N SQQ+   C+ CG+SEKSTPMMRR
Sbjct: 187 MQRNKGQFTSSKPIHEDSSLAMASWEQNESWSSDGNGSQQQEILCRHCGISEKSTPMMRR 246

Query: 366 GPEGPRTLCNACGLKWANKGTFAFRKAADIFIQNNLSTSVNEENIVANILDAENSDN 196
           GP+GPRTLCNACGL WANKGT             +LS + N+    A     EN D+
Sbjct: 247 GPDGPRTLCNACGLMWANKGTL-----------RDLSKTPNQGGQTATFNRNENGDS 292


>ref|XP_004159006.1| PREDICTED: GATA transcription factor 24-like [Cucumis sativus]
          Length = 303

 Score =  104 bits (260), Expect = 7e-21
 Identities = 51/81 (62%), Positives = 60/81 (74%), Gaps = 3/81 (3%)
 Frame = -2

Query: 537 MKRQKGQFASSKPTYAGFTSILSCDSSN--WSSDVNESQQESTCCQ-CGLSEKSTPMMRR 367
           M+R KGQF SSKP +   +  ++    N  WSSD N SQQ+   C+ CG+SEKSTPMMRR
Sbjct: 187 MQRNKGQFTSSKPIHEDSSLAMASWEQNESWSSDGNGSQQQEILCRHCGISEKSTPMMRR 246

Query: 366 GPEGPRTLCNACGLKWANKGT 304
           GP+GPRTLCNACGL WANKGT
Sbjct: 247 GPDGPRTLCNACGLMWANKGT 267


>ref|XP_002316441.1| predicted protein [Populus trichocarpa] gi|222865481|gb|EEF02612.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score =  103 bits (258), Expect = 1e-20
 Identities = 61/118 (51%), Positives = 71/118 (60%), Gaps = 4/118 (3%)
 Frame = -2

Query: 537 MKRQKGQFASSKPTYAGFTSILSCDSSNWS--SDVNESQ-QESTCCQCGLSEKSTPMMRR 367
           M+R KGQF SSKP +    S  +   SN S  SD N SQ QE+ C  CG+SEKSTPMMRR
Sbjct: 174 MQRNKGQFTSSKPNHDDSASAATSWGSNESGGSDSNGSQHQEAICRHCGISEKSTPMMRR 233

Query: 366 GPEGPRTLCNACGLKWANKGTFA-FRKAADIFIQNNLSTSVNEENIVANILDAENSDN 196
           GPEGPRTLCNACGL WANKGT     KAA         T  +  ++ +N +D     N
Sbjct: 234 GPEGPRTLCNACGLMWANKGTLRDLSKAAP-------HTGPSSSSMNSNAMDGNTDGN 284


>gb|AAK76580.1| putative flowering protein CONSTANS [Arabidopsis thaliana]
          Length = 302

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 53/103 (51%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
 Frame = -2

Query: 537 MKRQKGQFASSKPTYAGFTSILSCDSSN--WSSDVNESQ-QESTCCQCGLSEKSTPMMRR 367
           M+R KGQF S+K       S  S   SN  W+ + +E+Q QE +C  CG+ EKSTPMMRR
Sbjct: 179 MQRNKGQFTSAKSNNDEAASAGSSWGSNQTWAIESSEAQHQEISCRHCGIGEKSTPMMRR 238

Query: 366 GPEGPRTLCNACGLKWANKGTFAFRKAADIFIQNNLSTSVNEE 238
           GP GPRTLCNACGL WANKG F     A      NL  + NE+
Sbjct: 239 GPAGPRTLCNACGLMWANKGAFRDLSKASPQTAQNLPLNKNED 281


>ref|NP_564593.1| GATA transcription factor 28 [Arabidopsis thaliana]
           gi|42571823|ref|NP_974002.1| GATA transcription factor
           28 [Arabidopsis thaliana]
           gi|71660840|sp|Q8H1G0.1|GAT28_ARATH RecName: Full=GATA
           transcription factor 28; AltName: Full=Protein TIFY 2A;
           AltName: Full=ZIM-like 2 protein
           gi|23297318|gb|AAN12940.1| putative flowering protein
           CONSTANS [Arabidopsis thaliana]
           gi|38603660|dbj|BAD02931.1| GATA-type zinc finger
           protein [Arabidopsis thaliana]
           gi|332194567|gb|AEE32688.1| GATA transcription factor 28
           [Arabidopsis thaliana] gi|332194568|gb|AEE32689.1| GATA
           transcription factor 28 [Arabidopsis thaliana]
          Length = 302

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 53/103 (51%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
 Frame = -2

Query: 537 MKRQKGQFASSKPTYAGFTSILSCDSSN--WSSDVNESQ-QESTCCQCGLSEKSTPMMRR 367
           M+R KGQF S+K       S  S   SN  W+ + +E+Q QE +C  CG+ EKSTPMMRR
Sbjct: 179 MQRNKGQFTSAKSNNDEAASAGSSWGSNQTWAIESSEAQHQEISCRHCGIGEKSTPMMRR 238

Query: 366 GPEGPRTLCNACGLKWANKGTFAFRKAADIFIQNNLSTSVNEE 238
           GP GPRTLCNACGL WANKG F     A      NL  + NE+
Sbjct: 239 GPAGPRTLCNACGLMWANKGAFRDLSKASPQTAQNLPLNKNED 281


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