BLASTX nr result
ID: Coptis25_contig00030003
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00030003 (316 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003550892.1| PREDICTED: MATE efflux family protein DTX1-l... 99 3e-19 ref|XP_003516677.1| PREDICTED: MATE efflux family protein DTX1-l... 94 2e-17 ref|XP_002329845.1| predicted protein [Populus trichocarpa] gi|2... 92 4e-17 ref|XP_003525554.1| PREDICTED: MATE efflux family protein DTX1-l... 91 8e-17 ref|XP_003611216.1| Multidrug and toxin extrusion protein [Medic... 91 1e-16 >ref|XP_003550892.1| PREDICTED: MATE efflux family protein DTX1-like [Glycine max] Length = 468 Score = 99.4 bits (246), Expect = 3e-19 Identities = 49/86 (56%), Positives = 56/86 (65%) Frame = -2 Query: 312 GGIVRGTASPWLAMYANLSGFYFLALPLGVILAXXXXXXXXXXXXXXXXXVIACLILLLV 133 GGIVRGTA PWL MYAN+ GFYFLALPLGV+ A V+ACLILLL Sbjct: 371 GGIVRGTARPWLGMYANIGGFYFLALPLGVVFAFKLRLGLAGLIIGFLIGVVACLILLLT 430 Query: 132 FVMRINWVDEADKAQQLACAGEEVTD 55 F++RINWV EA KAQ L C +V + Sbjct: 431 FIVRINWVQEATKAQMLVCIPAQVQE 456 >ref|XP_003516677.1| PREDICTED: MATE efflux family protein DTX1-like [Glycine max] Length = 511 Score = 93.6 bits (231), Expect = 2e-17 Identities = 48/91 (52%), Positives = 58/91 (63%) Frame = -2 Query: 312 GGIVRGTASPWLAMYANLSGFYFLALPLGVILAXXXXXXXXXXXXXXXXXVIACLILLLV 133 GGIVRGTA PWL MYANL GFYFLALPLGV+ A ++ CL LLLV Sbjct: 409 GGIVRGTARPWLGMYANLGGFYFLALPLGVVFAFKLCLGLVGLLIGLLTGIVTCLTLLLV 468 Query: 132 FVMRINWVDEADKAQQLACAGEEVTDTSGFE 40 F+ R+NWV+EA KAQ L E+V + S ++ Sbjct: 469 FIARLNWVEEAAKAQTLT-GQEQVKELSKYD 498 >ref|XP_002329845.1| predicted protein [Populus trichocarpa] gi|222871082|gb|EEF08213.1| predicted protein [Populus trichocarpa] Length = 456 Score = 92.0 bits (227), Expect = 4e-17 Identities = 46/78 (58%), Positives = 55/78 (70%) Frame = -2 Query: 312 GGIVRGTASPWLAMYANLSGFYFLALPLGVILAXXXXXXXXXXXXXXXXXVIACLILLLV 133 GGIVRGTA PWL MYANL GFYFLALP+ V+LA ++ACLILL+V Sbjct: 373 GGIVRGTARPWLGMYANLGGFYFLALPMAVLLAFKAALGLGGLLVGFLIGLVACLILLVV 432 Query: 132 FVMRINWVDEADKAQQLA 79 FV+RI+W EA+KAQ+LA Sbjct: 433 FVVRIDWEVEAEKAQKLA 450 >ref|XP_003525554.1| PREDICTED: MATE efflux family protein DTX1-like [Glycine max] Length = 525 Score = 91.3 bits (225), Expect = 8e-17 Identities = 43/79 (54%), Positives = 51/79 (64%) Frame = -2 Query: 312 GGIVRGTASPWLAMYANLSGFYFLALPLGVILAXXXXXXXXXXXXXXXXXVIACLILLLV 133 GGIVRGT PWL+MYA+L GFYFL LPLGV+ A + ACL+LLL Sbjct: 410 GGIVRGTGRPWLSMYASLGGFYFLTLPLGVVFAFKLRFGLGGLLIGLLIGIAACLVLLLT 469 Query: 132 FVMRINWVDEADKAQQLAC 76 F++RINWV+EA KAQ C Sbjct: 470 FIVRINWVEEATKAQTFVC 488 >ref|XP_003611216.1| Multidrug and toxin extrusion protein [Medicago truncatula] gi|355512551|gb|AES94174.1| Multidrug and toxin extrusion protein [Medicago truncatula] Length = 511 Score = 90.9 bits (224), Expect = 1e-16 Identities = 46/78 (58%), Positives = 51/78 (65%) Frame = -2 Query: 312 GGIVRGTASPWLAMYANLSGFYFLALPLGVILAXXXXXXXXXXXXXXXXXVIACLILLLV 133 GGIVRGTA PWL MYANL GFYFLALPLGV+ A ++ CL LLLV Sbjct: 409 GGIVRGTARPWLGMYANLGGFYFLALPLGVVFAFKLRLGLVGLFFGLLTGIVVCLSLLLV 468 Query: 132 FVMRINWVDEADKAQQLA 79 F+ RI WV+EA KAQ LA Sbjct: 469 FIARIKWVEEAAKAQILA 486