BLASTX nr result

ID: Coptis25_contig00030003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030003
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550892.1| PREDICTED: MATE efflux family protein DTX1-l...    99   3e-19
ref|XP_003516677.1| PREDICTED: MATE efflux family protein DTX1-l...    94   2e-17
ref|XP_002329845.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
ref|XP_003525554.1| PREDICTED: MATE efflux family protein DTX1-l...    91   8e-17
ref|XP_003611216.1| Multidrug and toxin extrusion protein [Medic...    91   1e-16

>ref|XP_003550892.1| PREDICTED: MATE efflux family protein DTX1-like [Glycine max]
          Length = 468

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 49/86 (56%), Positives = 56/86 (65%)
 Frame = -2

Query: 312 GGIVRGTASPWLAMYANLSGFYFLALPLGVILAXXXXXXXXXXXXXXXXXVIACLILLLV 133
           GGIVRGTA PWL MYAN+ GFYFLALPLGV+ A                 V+ACLILLL 
Sbjct: 371 GGIVRGTARPWLGMYANIGGFYFLALPLGVVFAFKLRLGLAGLIIGFLIGVVACLILLLT 430

Query: 132 FVMRINWVDEADKAQQLACAGEEVTD 55
           F++RINWV EA KAQ L C   +V +
Sbjct: 431 FIVRINWVQEATKAQMLVCIPAQVQE 456


>ref|XP_003516677.1| PREDICTED: MATE efflux family protein DTX1-like [Glycine max]
          Length = 511

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 48/91 (52%), Positives = 58/91 (63%)
 Frame = -2

Query: 312 GGIVRGTASPWLAMYANLSGFYFLALPLGVILAXXXXXXXXXXXXXXXXXVIACLILLLV 133
           GGIVRGTA PWL MYANL GFYFLALPLGV+ A                 ++ CL LLLV
Sbjct: 409 GGIVRGTARPWLGMYANLGGFYFLALPLGVVFAFKLCLGLVGLLIGLLTGIVTCLTLLLV 468

Query: 132 FVMRINWVDEADKAQQLACAGEEVTDTSGFE 40
           F+ R+NWV+EA KAQ L    E+V + S ++
Sbjct: 469 FIARLNWVEEAAKAQTLT-GQEQVKELSKYD 498


>ref|XP_002329845.1| predicted protein [Populus trichocarpa] gi|222871082|gb|EEF08213.1|
           predicted protein [Populus trichocarpa]
          Length = 456

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 46/78 (58%), Positives = 55/78 (70%)
 Frame = -2

Query: 312 GGIVRGTASPWLAMYANLSGFYFLALPLGVILAXXXXXXXXXXXXXXXXXVIACLILLLV 133
           GGIVRGTA PWL MYANL GFYFLALP+ V+LA                 ++ACLILL+V
Sbjct: 373 GGIVRGTARPWLGMYANLGGFYFLALPMAVLLAFKAALGLGGLLVGFLIGLVACLILLVV 432

Query: 132 FVMRINWVDEADKAQQLA 79
           FV+RI+W  EA+KAQ+LA
Sbjct: 433 FVVRIDWEVEAEKAQKLA 450


>ref|XP_003525554.1| PREDICTED: MATE efflux family protein DTX1-like [Glycine max]
          Length = 525

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 43/79 (54%), Positives = 51/79 (64%)
 Frame = -2

Query: 312 GGIVRGTASPWLAMYANLSGFYFLALPLGVILAXXXXXXXXXXXXXXXXXVIACLILLLV 133
           GGIVRGT  PWL+MYA+L GFYFL LPLGV+ A                 + ACL+LLL 
Sbjct: 410 GGIVRGTGRPWLSMYASLGGFYFLTLPLGVVFAFKLRFGLGGLLIGLLIGIAACLVLLLT 469

Query: 132 FVMRINWVDEADKAQQLAC 76
           F++RINWV+EA KAQ   C
Sbjct: 470 FIVRINWVEEATKAQTFVC 488


>ref|XP_003611216.1| Multidrug and toxin extrusion protein [Medicago truncatula]
           gi|355512551|gb|AES94174.1| Multidrug and toxin
           extrusion protein [Medicago truncatula]
          Length = 511

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 46/78 (58%), Positives = 51/78 (65%)
 Frame = -2

Query: 312 GGIVRGTASPWLAMYANLSGFYFLALPLGVILAXXXXXXXXXXXXXXXXXVIACLILLLV 133
           GGIVRGTA PWL MYANL GFYFLALPLGV+ A                 ++ CL LLLV
Sbjct: 409 GGIVRGTARPWLGMYANLGGFYFLALPLGVVFAFKLRLGLVGLFFGLLTGIVVCLSLLLV 468

Query: 132 FVMRINWVDEADKAQQLA 79
           F+ RI WV+EA KAQ LA
Sbjct: 469 FIARIKWVEEAAKAQILA 486


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