BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030001
         (733 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003560419.1| PREDICTED: F-box protein At5g07610-like [Bra...    75   2e-11
dbj|BAJ93688.1| predicted protein [Hordeum vulgare subsp. vulgare]     74   2e-11
ref|XP_003563379.1| PREDICTED: F-box protein At5g07610-like [Bra...    72   2e-10
gb|EEC78488.1| hypothetical protein OsI_18388 [Oryza sativa Indi...    71   3e-10
gb|EEE62269.1| hypothetical protein OsJ_17056 [Oryza sativa Japo...    65   1e-08

>ref|XP_003560419.1| PREDICTED: F-box protein At5g07610-like [Brachypodium distachyon]
          Length = 497

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 57/166 (34%), Positives = 83/166 (50%), Gaps = 3/166 (1%)
 Frame = +3

Query: 138 SPSFSLMDEDTIEEVLLHLPVKSLVRCKCLSKRWNQFISHNSSFRRRYVSIINPTTPHIL 317
           SP+  L D D I E+L  LP KS+ R KC+S  W   I+  ++ RR+    ++    H +
Sbjct: 9   SPAADLTD-DLIVEILSRLPAKSICRFKCVSPHWRSLITDRAN-RRKLPQTLSGFFRHTV 66

Query: 318 GXXXXXXXXMEGSKKINVPVRFFPTSIEGCKLIKGVETWGAPSPFDQSLSFMGLHGQTIY 497
           G           ++ I+VPV  F + + G     G E      P   SLSF+    +TI 
Sbjct: 67  GQDGH-------NEPISVPV--FYSIVSGL----GEEEKHVRDP---SLSFLPGCYKTII 110

Query: 498 PRGSCNGFLLCTSEEYNP---INYFICNPMTKQWVSLPPANITSYL 626
           P+  CNG LLC   + +P    NY +CNP T++WV LP ++  S L
Sbjct: 111 PKDCCNGLLLCLCWKGSPKDESNYVVCNPATEKWVILPQSDQASQL 156


>dbj|BAJ93688.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 426

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 52/168 (30%), Positives = 75/168 (44%), Gaps = 4/168 (2%)
 Frame = +3

Query: 141 PSFSLMDEDTIEEVLLHLPVKSLVRCKCLSKRWNQFISHNSSFRRRYVSIINPTTPHILG 320
           P+  L+D D + E+L  +P K+L RCKC+SK W   I H    +R       P T  + G
Sbjct: 28  PAGRLID-DILVEILSRVPAKALCRCKCVSKHWLGLIDHPDHRKRL------PQT--LAG 78

Query: 321 XXXXXXXXMEGSKKINVPVRFFPTSIEGCKLIKGVETWGAPSPFDQSLSFMGLHGQTIYP 500
                     G +++ +P R+   S+ G +           +PFD S +F+  H   +  
Sbjct: 79  FFYGSSASTTGQRRLELPFRY--ASLSGDR---------RGAPFDASFTFLPNHRMPVEL 127

Query: 501 RGSCNGFLLC----TSEEYNPINYFICNPMTKQWVSLPPANITSYLVA 632
             SCNG LLC     S       Y +CNP T +W  LP +   S  VA
Sbjct: 128 LDSCNGLLLCRCYHISHGVGAFRYVVCNPATHEWAVLPNSGKDSSEVA 175


>ref|XP_003563379.1| PREDICTED: F-box protein At5g07610-like [Brachypodium distachyon]
          Length = 383

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 54/167 (32%), Positives = 81/167 (48%), Gaps = 4/167 (2%)
 Frame = +3

Query: 138 SPSFSLMDEDTIEEVLLHLPVKSLVRCKCLSKRWNQFISHNSSFRRRYVSIINPTTPHIL 317
           SP+  L D D I E+L  LP KS+ R KC+S  W + I+  ++ R+          P  L
Sbjct: 9   SPAADLTD-DLIVEILSRLPAKSICRFKCVSPHWRRLITDRANRRK---------LPQTL 58

Query: 318 GXXXXXXXXMEG-SKKINVPVRFFPTSIEGCKLIKGVETWGAPSPFDQSLSFMGLHGQTI 494
                     +G  K I+ P  +F + I G     G E      P   SLSF+  + ++I
Sbjct: 59  SGFFRYAVGPDGDGKAISAP--YFNSIISGL----GEEERHVHDP---SLSFLPGYYRSI 109

Query: 495 YPRGSCNGFLLCTSEEYNPIN---YFICNPMTKQWVSLPPANITSYL 626
            P+  CNG LLC   + +P N   Y +CNP T++W+ LP ++  S +
Sbjct: 110 IPKDCCNGLLLCICWKDSPSNEFHYVVCNPATEKWLILPQSDQDSQM 156


>gb|EEC78488.1| hypothetical protein OsI_18388 [Oryza sativa Indica Group]
          Length = 374

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 54/164 (32%), Positives = 77/164 (46%), Gaps = 5/164 (3%)
 Frame = +3

Query: 126 VDYYSPSFSLMDEDTIEEVLLHLPVKSLVRCKCLSKRWNQFISHNSSFRRRYVSIINPTT 305
           +D  +P+  L D D I E+L  LP KS+ R KC+S RW + ISH    ++          
Sbjct: 14  IDGDNPAADLTD-DLIVEILSRLPAKSVCRFKCVSWRWRRLISHRDHRKK---------L 63

Query: 306 PHILGXXXXXXXXMEGSKKINVPVRFFPTSIEGCKLIKGVETWGAPSPF--DQSLSFMGL 479
           PH L                +VP+      I     I GVE          D SLSF+  
Sbjct: 64  PHTLAGFI---------SHYSVPLHDGIVLIPHFDSIDGVEEDEEEHRLVPDPSLSFLPG 114

Query: 480 HGQTIYPRGSCNGFLLCTSEEYNP---INYFICNPMTKQWVSLP 602
           + +TI+P+  CNG LLC   + +P    +Y +CNP T++W+ LP
Sbjct: 115 Y-RTIFPKDCCNGLLLCLCCKNSPRDESDYVVCNPATQRWIILP 157


>gb|EEE62269.1| hypothetical protein OsJ_17056 [Oryza sativa Japonica Group]
          Length = 230

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 4/153 (2%)
 Frame = +3

Query: 156 MDEDTIEEVLLHLPVKSLVRCKCLSKRWNQFISHNSSFRRRYVSIINPTTPHIL-GXXXX 332
           + +D I ++L  LP KS+ R KC+S RW + ISH    ++          PH L G    
Sbjct: 19  LPDDLIVDILSRLPAKSVCRFKCVSWRWRRLISHRDHRKK---------LPHTLSGFISR 69

Query: 333 XXXXMEGSKKINVPVRFFPTSIEGCKLIKGVETWGAPSPFDQSLSFMGLHGQTIYPRGSC 512
               +   + +++P      SI+G +  +  E    P P   SLSF+ L   +I P+  C
Sbjct: 70  YYGPLNDDELVSIP---HFDSIDGGEEDE-EEHRLVPDP---SLSFL-LGYMSISPKDCC 121

Query: 513 NGFLLCTSEEYNP---INYFICNPMTKQWVSLP 602
           NG LLC   + +P    +Y +CNP T++W+ LP
Sbjct: 122 NGLLLCLCCKNSPRDESDYVVCNPATQRWIILP 154