BLASTX nr result

ID: Coptis25_contig00030000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030000
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140453.1| PREDICTED: uncharacterized protein LOC101214...    58   2e-13
emb|CBI27491.3| unnamed protein product [Vitis vinifera]               50   5e-11
ref|XP_003631316.1| PREDICTED: uncharacterized protein LOC100855...    50   5e-11
ref|XP_003524133.1| PREDICTED: uncharacterized protein LOC100802...    52   1e-10
ref|XP_002311565.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-10

>ref|XP_004140453.1| PREDICTED: uncharacterized protein LOC101214394 [Cucumis sativus]
          Length = 2763

 Score = 57.8 bits (138), Expect(2) = 2e-13
 Identities = 28/43 (65%), Positives = 34/43 (79%)
 Frame = +3

Query: 132 NNSESFESEYQYLSSYICPLLEETRAELSSSLEVISKAPYAEL 260
           N  ESF+S +QYL SY+ PLLEETRAELSS L+ I KAP+A +
Sbjct: 44  NIPESFKSVHQYLGSYLFPLLEETRAELSSGLKAIHKAPFARM 86



 Score = 42.7 bits (99), Expect(2) = 2e-13
 Identities = 20/36 (55%), Positives = 24/36 (66%)
 Frame = +1

Query: 34  KTMKTHETGLIRQLFSWTLKDISNEELYRDKVETIP 141
           K  K    GLI  LFSWTL+DI  ++ YRDKV+ IP
Sbjct: 11  KAKKICFNGLIDHLFSWTLEDILYDDFYRDKVQNIP 46


>emb|CBI27491.3| unnamed protein product [Vitis vinifera]
          Length = 6100

 Score = 49.7 bits (117), Expect(2) = 5e-11
 Identities = 22/39 (56%), Positives = 32/39 (82%)
 Frame = +3

Query: 144  SFESEYQYLSSYICPLLEETRAELSSSLEVISKAPYAEL 260
            +F+S   Y +S++ PLLEETRA+LS  LE+IS+AP+AE+
Sbjct: 1395 TFQSAEHYFASFVYPLLEETRAQLSLGLELISRAPFAEV 1433



 Score = 42.4 bits (98), Expect(2) = 5e-11
 Identities = 17/29 (58%), Positives = 25/29 (86%)
 Frame = +1

Query: 55   TGLIRQLFSWTLKDISNEELYRDKVETIP 141
            +GL ++LFSW+L+DI NE+LY+ +VE IP
Sbjct: 1365 SGLTQRLFSWSLEDIQNEDLYKTQVEKIP 1393



 Score = 45.4 bits (106), Expect(2) = 8e-10
 Identities = 22/40 (55%), Positives = 29/40 (72%)
 Frame = +3

Query: 141  ESFESEYQYLSSYICPLLEETRAELSSSLEVISKAPYAEL 260
            ESF +   Y  SYI PLLE+ RAE+ SS+E I +AP+AE+
Sbjct: 3527 ESFGTVDHYFGSYIYPLLEDIRAEMCSSMEDIHRAPFAEV 3566



 Score = 42.4 bits (98), Expect(2) = 8e-10
 Identities = 17/30 (56%), Positives = 26/30 (86%)
 Frame = +1

Query: 52   ETGLIRQLFSWTLKDISNEELYRDKVETIP 141
            ++GL ++LFSW+L+DI NE+LY+ +VE IP
Sbjct: 3497 DSGLTQRLFSWSLEDIYNEDLYKTQVEEIP 3526


>ref|XP_003631316.1| PREDICTED: uncharacterized protein LOC100855072 [Vitis vinifera]
          Length = 883

 Score = 49.7 bits (117), Expect(2) = 5e-11
 Identities = 22/39 (56%), Positives = 32/39 (82%)
 Frame = +3

Query: 144 SFESEYQYLSSYICPLLEETRAELSSSLEVISKAPYAEL 260
           +F+S   Y +S++ PLLEETRA+LS  LE+IS+AP+AE+
Sbjct: 42  TFQSAEHYFASFVYPLLEETRAQLSLGLELISRAPFAEV 80



 Score = 42.4 bits (98), Expect(2) = 5e-11
 Identities = 17/29 (58%), Positives = 25/29 (86%)
 Frame = +1

Query: 55  TGLIRQLFSWTLKDISNEELYRDKVETIP 141
           +GL ++LFSW+L+DI NE+LY+ +VE IP
Sbjct: 12  SGLTQRLFSWSLEDIQNEDLYKTQVEKIP 40


>ref|XP_003524133.1| PREDICTED: uncharacterized protein LOC100802419 [Glycine max]
          Length = 2812

 Score = 51.6 bits (122), Expect(2) = 1e-10
 Identities = 23/38 (60%), Positives = 30/38 (78%)
 Frame = +3

Query: 147 FESEYQYLSSYICPLLEETRAELSSSLEVISKAPYAEL 260
           F+S   Y  SY+ PLLEETRA+L SS+E++S APYAE+
Sbjct: 39  FKSVRHYFGSYVYPLLEETRAQLCSSMEILSSAPYAEV 76



 Score = 39.3 bits (90), Expect(2) = 1e-10
 Identities = 16/27 (59%), Positives = 22/27 (81%)
 Frame = +1

Query: 58  GLIRQLFSWTLKDISNEELYRDKVETI 138
           G +  +FSW+L+DI NE+LY+DKVE I
Sbjct: 9   GFVDIIFSWSLEDIFNEDLYKDKVEPI 35


>ref|XP_002311565.1| predicted protein [Populus trichocarpa] gi|222851385|gb|EEE88932.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score = 56.6 bits (135), Expect(2) = 1e-10
 Identities = 26/43 (60%), Positives = 35/43 (81%)
 Frame = +3

Query: 132 NNSESFESEYQYLSSYICPLLEETRAELSSSLEVISKAPYAEL 260
           N  ES+ S   YL SY+ PLLEETRA+LSSS+++IS+AP+AE+
Sbjct: 45  NIPESYYSVEHYLGSYVIPLLEETRAQLSSSMDIISRAPFAEM 87



 Score = 33.9 bits (76), Expect(2) = 1e-10
 Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
 Frame = +1

Query: 22  EAE*KTMKTHET----GLIRQLFSWTLKDISNEELYRDKVETIP 141
           E+  K MK  E     G +  +FSW+L+DI NE L+  KVE IP
Sbjct: 6   ESSSKMMKKKEIPNDRGFVDTIFSWSLEDIFNENLF--KVENIP 47


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