BLASTX nr result

ID: Coptis25_contig00029999 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029999
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH66110.1| OSIGBa0115D20.3 [Oryza sativa Indica Group] gi|1...    80   1e-13
emb|CAE01302.2| OSJNBa0020P07.19 [Oryza sativa Japonica Group]         79   3e-13
gb|ABA98519.1| hAT family dimerisation domain containing protein...    78   6e-13
gb|EAY83126.1| hypothetical protein OsI_38342 [Oryza sativa Indi...    78   6e-13
ref|XP_003550816.1| PREDICTED: uncharacterized protein LOC100783...    78   8e-13

>emb|CAH66110.1| OSIGBa0115D20.3 [Oryza sativa Indica Group]
           gi|116317932|emb|CAH65955.1| H0716A07.13 [Oryza sativa
           Indica Group]
          Length = 653

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 35/91 (38%), Positives = 57/91 (62%)
 Frame = -1

Query: 492 SNASELQWYLDQPSLVTSNRETLDVLGWWKAQQINYPILSSMARDLLTIPISSVPIDAAF 313
           S+ +ELQ Y++QP L+ ++++T D+L WWK +Q  +PIL  +ARD L I +S+V  ++AF
Sbjct: 504 SDKTELQIYMEQPLLLWTSKDTFDILSWWKLKQAEFPILCKLARDFLCIQVSTVASESAF 563

Query: 312 TTSA*TLNDFCMNWSPLIVEAAACLNDWFEA 220
           +     ++ F     P  V+A  C  DW +A
Sbjct: 564 SAGGRVVDPFRTRLDPEAVQALVCTKDWIKA 594


>emb|CAE01302.2| OSJNBa0020P07.19 [Oryza sativa Japonica Group]
          Length = 741

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 34/91 (37%), Positives = 57/91 (62%)
 Frame = -1

Query: 492 SNASELQWYLDQPSLVTSNRETLDVLGWWKAQQINYPILSSMARDLLTIPISSVPIDAAF 313
           S+ +ELQ Y++QP L+ ++++T D+L WWK +Q  +PIL  +ARD L I +S+V  ++AF
Sbjct: 601 SDKTELQIYMEQPLLLWTSKDTFDILSWWKLKQAEFPILCKLARDFLCIQVSTVASESAF 660

Query: 312 TTSA*TLNDFCMNWSPLIVEAAACLNDWFEA 220
           +     ++ F     P  ++A  C  DW +A
Sbjct: 661 SAGGHVVDPFRTRLDPEAMQALVCTKDWIKA 691


>gb|ABA98519.1| hAT family dimerisation domain containing protein [Oryza sativa
           Japonica Group]
          Length = 337

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 34/91 (37%), Positives = 56/91 (61%)
 Frame = -1

Query: 492 SNASELQWYLDQPSLVTSNRETLDVLGWWKAQQINYPILSSMARDLLTIPISSVPIDAAF 313
           S+ +ELQ Y++QP L+ ++++  D+L WWK +Q  +PIL  +ARD L I +S+V  ++AF
Sbjct: 197 SDKTELQIYMEQPLLLWTSKDPFDILSWWKLKQAEFPILCKLARDFLCIQVSTVASESAF 256

Query: 312 TTSA*TLNDFCMNWSPLIVEAAACLNDWFEA 220
           +     ++ F     P  V+A  C  DW +A
Sbjct: 257 SAGGRVVDPFRTRLDPEAVQALVCTKDWIKA 287


>gb|EAY83126.1| hypothetical protein OsI_38342 [Oryza sativa Indica Group]
          Length = 232

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 34/91 (37%), Positives = 56/91 (61%)
 Frame = -1

Query: 492 SNASELQWYLDQPSLVTSNRETLDVLGWWKAQQINYPILSSMARDLLTIPISSVPIDAAF 313
           S+ +ELQ Y++QP L+ ++++  D+L WWK +Q  +PIL  +ARD L I +S+V  ++AF
Sbjct: 111 SDKTELQIYMEQPLLLWTSKDPFDILSWWKLKQAEFPILCKLARDFLCIQVSTVASESAF 170

Query: 312 TTSA*TLNDFCMNWSPLIVEAAACLNDWFEA 220
           +     ++ F     P  V+A  C  DW +A
Sbjct: 171 SAGGRVVDPFHTRLDPEAVQALVCTKDWIKA 201


>ref|XP_003550816.1| PREDICTED: uncharacterized protein LOC100783258 [Glycine max]
          Length = 1154

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 42/104 (40%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
 Frame = -1

Query: 498  SQSNASELQWYLDQPSLVTSNRETLDVLGWWKAQQINYPILSSMARDLLTIPISSVPIDA 319
            S    SEL  YL++  L        DVLGWWK  ++ YP LS MARD+L++P+SSVP ++
Sbjct: 1050 SHQMKSELDQYLEESLL--PRVPDFDVLGWWKLNKLKYPTLSKMARDILSVPVSSVPPES 1107

Query: 318  AFTTSA*TLNDFCMNWSPLIVEAAACLNDWFE---AEAGSQDVK 196
             F T    ++ +  +  P  VEA  C  DW +   AEA +  VK
Sbjct: 1108 VFDTKVKEMDQYRSSLRPETVEAIVCAKDWMQYGAAEASNAIVK 1151


Top