BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029990
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529107.1| conserved hypothetical protein [Ricinus comm...   107   8e-22
ref|XP_003537671.1| PREDICTED: general transcription factor 3C p...   100   1e-19
ref|XP_003622989.1| General transcription factor 3C polypeptide ...    99   4e-19
ref|XP_003622988.1| General transcription factor 3C polypeptide ...    99   4e-19
emb|CBI24753.3| unnamed protein product [Vitis vinifera]               99   4e-19

>ref|XP_002529107.1| conserved hypothetical protein [Ricinus communis]
           gi|223531458|gb|EEF33291.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 540

 Score =  107 bits (268), Expect = 8e-22
 Identities = 50/75 (66%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
 Frame = +2

Query: 2   YQRIDFRVPPPVRRIGDVHATDKLKHMWKDLCALQVFPCKCQISLQLFELDDDYIREEIK 181
           YQRIDFRVPPP+R   D +A   LKH W+DLC  QVFP K Q SLQL ELDDDYI++EIK
Sbjct: 295 YQRIDFRVPPPLRSFSDANAAKGLKHKWEDLCKFQVFPYKFQTSLQLCELDDDYIQQEIK 354

Query: 182 KPP-EDTCSCSTGWF 223
           KPP + TC+  TGWF
Sbjct: 355 KPPKQTTCTYGTGWF 369


>ref|XP_003537671.1| PREDICTED: general transcription factor 3C polypeptide 5-like
           [Glycine max]
          Length = 547

 Score =  100 bits (250), Expect = 1e-19
 Identities = 46/76 (60%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
 Frame = +2

Query: 2   YQRIDFRVPPPVRRIGDVHATDKLKHMWKDLCALQVFPCKCQISLQLFELDDDYIREEIK 181
           YQRID+RVP P+R   D H+ +K KH WKD+CA +VFP K Q SLQ F+L DDYI+ EI 
Sbjct: 316 YQRIDYRVPVPLRSYCDAHSANKSKHRWKDICAFRVFPYKFQTSLQFFDLVDDYIQSEIN 375

Query: 182 KPP-EDTCSCSTGWFS 226
           KPP   TC+  TGWFS
Sbjct: 376 KPPFRPTCTSGTGWFS 391


>ref|XP_003622989.1| General transcription factor 3C polypeptide [Medicago truncatula]
           gi|355498004|gb|AES79207.1| General transcription factor
           3C polypeptide [Medicago truncatula]
          Length = 509

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 45/76 (59%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
 Frame = +2

Query: 2   YQRIDFRVPPPVRRIGDVHATDKLKHMWKDLCALQVFPCKCQISLQLFELDDDYIREEIK 181
           YQRID+RVP P+R   D ++ DKLKH W D+CA + FP K Q SLQ  EL DDYI+ EI 
Sbjct: 270 YQRIDYRVPVPLRSFCDTYSADKLKHKWGDICAFRAFPYKFQTSLQFVELIDDYIQSEIN 329

Query: 182 KPP-EDTCSCSTGWFS 226
           KPP +DTC+  +GWFS
Sbjct: 330 KPPMQDTCTFESGWFS 345


>ref|XP_003622988.1| General transcription factor 3C polypeptide [Medicago truncatula]
           gi|355498003|gb|AES79206.1| General transcription factor
           3C polypeptide [Medicago truncatula]
          Length = 612

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 45/76 (59%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
 Frame = +2

Query: 2   YQRIDFRVPPPVRRIGDVHATDKLKHMWKDLCALQVFPCKCQISLQLFELDDDYIREEIK 181
           YQRID+RVP P+R   D ++ DKLKH W D+CA + FP K Q SLQ  EL DDYI+ EI 
Sbjct: 373 YQRIDYRVPVPLRSFCDTYSADKLKHKWGDICAFRAFPYKFQTSLQFVELIDDYIQSEIN 432

Query: 182 KPP-EDTCSCSTGWFS 226
           KPP +DTC+  +GWFS
Sbjct: 433 KPPMQDTCTFESGWFS 448


>emb|CBI24753.3| unnamed protein product [Vitis vinifera]
          Length = 597

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 45/76 (59%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
 Frame = +2

Query: 2   YQRIDFRVPPPVRRIGDVHATDKLKHMWKDLCALQVFPCKCQISLQLFELDDDYIREEIK 181
           YQRIDFRVPP +R   D +A + LK  W+D+C+ +VFP KC  SLQLFEL DDYI++EI+
Sbjct: 354 YQRIDFRVPPSLRSYCDANAANGLKQRWEDICSFRVFPYKCHTSLQLFELADDYIQQEIR 413

Query: 182 KP-PEDTCSCSTGWFS 226
           KP  + TC+ +TGWFS
Sbjct: 414 KPLKQTTCTGATGWFS 429