BLASTX nr result

ID: Coptis25_contig00029979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029979
         (826 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72964.1| hypothetical protein VITISV_016492 [Vitis vinifera]   204   1e-50
emb|CBI17874.3| unnamed protein product [Vitis vinifera]              183   4e-44
ref|XP_003633217.1| PREDICTED: uncharacterized protein LOC100852...   172   8e-41
ref|XP_002325235.1| predicted protein [Populus trichocarpa] gi|2...   161   1e-37
ref|XP_003610003.1| Lysine-specific demethylase NO66 [Medicago t...   158   1e-36

>emb|CAN72964.1| hypothetical protein VITISV_016492 [Vitis vinifera]
          Length = 590

 Score =  204 bits (520), Expect = 1e-50
 Identities = 120/275 (43%), Positives = 171/275 (62%), Gaps = 5/275 (1%)
 Frame = -2

Query: 810 VYLCSMGRGSSKCPGGEVKENAFRGLILEATVTLINTCNVKQLSGIPEELSAIILSYLKA 631
           V +CS+ +G   C    VKE+    L+L A +TLINT ++ QL  +P +LS     YLK 
Sbjct: 183 VSICSLDKGGDICLRIGVKEDDLVVLLLNAAITLINTYDIDQLENMPRKLSEAFSVYLKE 242

Query: 630 FLVQVQNQSSQSDFTNCSRKRHSCLSIVKLHDLTQSIFRLSIKSGNTTTCIS-DKVKKSI 454
             V+V NQ    +     +  H  LS ++ ++L +SIFRLSI +G+ TT    + VKKSI
Sbjct: 243 LWVKVHNQMLLRNTVKFGQDEHFNLSSIRTNNLAESIFRLSINAGHLTTPFPFEVVKKSI 302

Query: 453 FGPNQSVFEHFIFNYWENSPFVLRRLLEPLSGPQDSLNSFIQSFN-SMGIHDVLSSIIEG 277
           FG  +S FE+FI N+WE SP ++R L + L+   D  +SF+Q  N    +   +S +++G
Sbjct: 303 FGTRESSFENFILNHWEVSPLLVRSLSKGLNEQDDVFSSFVQYLNLKKTVSSFVSPLLQG 362

Query: 276 LVSCPPLPSDELDILNFLKENKDGLGHQIIYGQDIRVVKAVEGSLGTSRGNLKTEVHFLK 97
           LVSC P+ SDEL+ILNFLK  ++ LG  IIYGQDIRV++ +        G+LK EVHF +
Sbjct: 363 LVSCLPIDSDELNILNFLKTVRNELGCLIIYGQDIRVLRTM--------GHLKEEVHFFQ 414

Query: 96  ECTGPSCISDPNFI---NIQKCEEAYREGYSIALR 1
           E + P CI  P+F+   +I KCE+AY +GY+IALR
Sbjct: 415 ESSEP-CIKAPHFLYIDDILKCEDAYNKGYTIALR 448


>emb|CBI17874.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  183 bits (465), Expect = 4e-44
 Identities = 116/273 (42%), Positives = 162/273 (59%), Gaps = 3/273 (1%)
 Frame = -2

Query: 810 VYLCSMGRGSSKCPGGEVKENAFRGLILEATVTLINTCNVKQLSGIPEELSAIILSYLKA 631
           V +CS+ +G + C    VKE+    L+L A +TLINT ++ QL  +P +LS     YLK 
Sbjct: 175 VSICSLDKGGNICLRIGVKEDDLVVLLLNAAITLINTYDIDQLENMPRKLSEAFSVYLKE 234

Query: 630 FLVQVQNQSSQSDFTNCSRKRHSCLSIVKLHDLTQSIFRLSIKSGNTTTCIS-DKVKKSI 454
             V+V NQ    +     +  H  LS ++ ++L +SIFRLSI +G+ TT    + VKKSI
Sbjct: 235 LWVKVHNQMLLRNTVKFGQDEHFNLSSIRTNNLAESIFRLSINAGHLTTPFPFEVVKKSI 294

Query: 453 FGPNQSVFEHFIFNYWENSPFVLRRLLEPLSGPQDSLNSFIQSFN-SMGIHDVLSSIIEG 277
           FG  +S FE+FI N+WE SP ++R L + L+   D  +SFIQ  N    +   +  +++G
Sbjct: 295 FGTRESSFENFILNHWEVSPLLVRSLSKGLNEQDDVFSSFIQYLNLKKTVSSFVLPLLQG 354

Query: 276 LVSCPPLPSDELDILNFLKENKDGLGHQIIYGQDIRVVKAVEGSLGTSRGNLKTEV-HFL 100
           LVSC P+ SDEL+ILNFLK  ++ LG  IIYGQDIRV++ +        G+LK E  HFL
Sbjct: 355 LVSCLPIDSDELNILNFLKTVRNELGCLIIYGQDIRVLRTM--------GHLKEEAPHFL 406

Query: 99  KECTGPSCISDPNFINIQKCEEAYREGYSIALR 1
                   I D     I KCE+AY +GY+IALR
Sbjct: 407 -------YIDD-----ILKCEDAYNKGYTIALR 427


>ref|XP_003633217.1| PREDICTED: uncharacterized protein LOC100852762 [Vitis vinifera]
          Length = 564

 Score =  172 bits (436), Expect = 8e-41
 Identities = 102/230 (44%), Positives = 144/230 (62%), Gaps = 5/230 (2%)
 Frame = -2

Query: 675 IPEELSAIILSYLKAFLVQVQNQSSQSDFTNCSRKRHSCLSIVKLHDLTQSIFRLSIKSG 496
           +P +LS     YLK   V+V NQ    +     +  H  LS ++ ++L +SIFRLSI +G
Sbjct: 1   MPRKLSEAFSVYLKELWVKVHNQMLLRNTVKFGQDEHFNLSSIRTNNLAESIFRLSINAG 60

Query: 495 NTTTCIS-DKVKKSIFGPNQSVFEHFIFNYWENSPFVLRRLLEPLSGPQDSLNSFIQSFN 319
           + TT    + VKKSIFG  +S FE+FI N+WE SP ++R L + L+   D  +SFIQ  N
Sbjct: 61  HLTTPFPFEVVKKSIFGTRESSFENFILNHWEVSPLLVRSLSKGLNEQDDVFSSFIQYLN 120

Query: 318 -SMGIHDVLSSIIEGLVSCPPLPSDELDILNFLKENKDGLGHQIIYGQDIRVVKAVEGSL 142
               +   +  +++GLVSC P+ SDEL+ILNFLK  ++ LG  IIYGQDIRV++ +    
Sbjct: 121 LKKTVSSFVLPLLQGLVSCLPIDSDELNILNFLKTVRNELGCLIIYGQDIRVLRTM---- 176

Query: 141 GTSRGNLKTEVHFLKECTGPSCISDPNFI---NIQKCEEAYREGYSIALR 1
               G+LK EVHF +E + P CI  P+F+   +I KCE+AY +GY+IALR
Sbjct: 177 ----GHLKEEVHFFQESSEP-CIKAPHFLYIDDILKCEDAYNKGYTIALR 221


>ref|XP_002325235.1| predicted protein [Populus trichocarpa] gi|222866669|gb|EEF03800.1|
           predicted protein [Populus trichocarpa]
          Length = 764

 Score =  161 bits (408), Expect = 1e-37
 Identities = 103/256 (40%), Positives = 148/256 (57%), Gaps = 4/256 (1%)
 Frame = -2

Query: 756 KENAFRGLILEATVTLINTCNVKQLSGIPEELSAIILSYLKAFLVQVQNQSSQSDFTNCS 577
           KE+     IL A +TLINTCNV+QL  IP +LS   L  LK    +V +Q    +  +  
Sbjct: 173 KEDGHAVSILHAAITLINTCNVEQLEKIPWKLSEKFLVSLKTLWEKVHDQMLLGNAWSSR 232

Query: 576 RKRHSCLSIVKLHDLTQSIFRLSIKSGNTTTCI-SDKVKKSIFGPNQSVFEHFIFNYWEN 400
           R R   LS V ++ L +SIFRLSI        + S    + IFG +   FE+F+ ++WE+
Sbjct: 233 RDRDLNLSNVTVNSLAESIFRLSINVSEFVIPLPSVLFDRMIFGWSDLGFENFMLHHWES 292

Query: 399 SPFVLRRLLEPLSGPQDSLNSFIQSFN-SMGIHDVLSSIIEGLVSCPPLPSDELDILNFL 223
           SP ++RRL   L+   D L+SF +S N        ++SI++  +SC P+ SDEL+I++FL
Sbjct: 293 SPSLVRRLSGSLTEENDILSSFAESLNCKEPCPTFVASILQSFISCVPIASDELNIISFL 352

Query: 222 KENKDGLGHQIIYGQDIRVVKAVEGSLGTSRGNLKTEVHFLKECTGPSCISDPNF--INI 49
           +E +  LG  IIY QDIRV++  + S        K EVHF ++   P C     F  ++I
Sbjct: 353 EEVRSELGCPIIYDQDIRVLRTEQPS--------KKEVHFFQKKVDPCCFKKLAFNNVDI 404

Query: 48  QKCEEAYREGYSIALR 1
            KCEEA++EGY+IALR
Sbjct: 405 MKCEEAFKEGYTIALR 420


>ref|XP_003610003.1| Lysine-specific demethylase NO66 [Medicago truncatula]
           gi|355511058|gb|AES92200.1| Lysine-specific demethylase
           NO66 [Medicago truncatula]
          Length = 784

 Score =  158 bits (400), Expect = 1e-36
 Identities = 107/275 (38%), Positives = 147/275 (53%), Gaps = 5/275 (1%)
 Frame = -2

Query: 810 VYLCSMGRGSSKCPGGEVKENAFRGLILEATVTLINTCNVKQLSGIPEELSAIILSYLKA 631
           V L S G  S       ++E+     +L A + LIN CNV+QL  IPE +S   LS LK 
Sbjct: 185 VCLLSEGNQSFHALKIGIREDELSVALLSAIIVLINVCNVEQLHNIPESVSEAFLSLLKE 244

Query: 630 FLVQVQNQSSQSDFTNCSRKRHSCLSIVKLHDLTQSIFRLSIKSGNTTTCIS-DKVKKSI 454
                 +          + +   C S V + DL  SIFRLSI +   +  +  + V++ +
Sbjct: 245 IRANATHHLVIRGDVKSNVEGRFCKSNVGVCDLADSIFRLSINASQLSVSLPFEVVQRGL 304

Query: 453 FGPNQSVFEHFIFNYWENSPFVLRRLLEPLSGPQDSLNSFIQSFNSMG-IHDVLSSIIEG 277
           FG + S FE F+ N+WE SPF+L R  E      D  + FIQS N  G +  +L SI++ 
Sbjct: 305 FGTSGSSFEDFLSNHWEVSPFLLSRTSED-HNVNDMFSPFIQSLNWNGSVPSLLHSILQD 363

Query: 276 LVSCPPLPSDELDILNFLKENKDGLGHQIIYGQDIRVVKAVEGSLGTSRGNLKTEVHFLK 97
           LVSC P+ S+E +ILNFL E KD LG  IIY QDIRVVKA   S        + E H+  
Sbjct: 364 LVSCFPIASEEQNILNFLIEVKDRLGCPIIYQQDIRVVKADSQS--------RKETHYFH 415

Query: 96  ECTGPSCISDPNFI---NIQKCEEAYREGYSIALR 1
               P C  +P +    ++ KCE+AY+EGY++ALR
Sbjct: 416 ----PECHKEPLYFTNEDVLKCEQAYKEGYTVALR 446


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