BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029977
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADO00336.1| F-box protein [Elaeis guineensis]                       70   1e-10
ref|XP_002305655.1| f-box family protein [Populus trichocarpa] g...    62   6e-08
ref|XP_002316660.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>gb|ADO00336.1| F-box protein [Elaeis guineensis]
          Length = 178

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 43/76 (56%), Positives = 50/76 (65%), Gaps = 6/76 (7%)
 Frame = -1

Query: 420 LIAKRDHFAYSTPS-KMVFRRFG-----DMEIEDEAPNAPKQDRRNYRKSRIDGKKLGDI 259
           LIAK  HFA+STPS K  FRR G     D+E+ +EAPNAPKQ  R   KSR+ GK L  I
Sbjct: 100 LIAKEMHFAFSTPSSKPTFRREGNMGDIDLEVSEEAPNAPKQ--RRVAKSRLGGKTLSSI 157

Query: 258 TVALFHSPEKQQWRRN 211
            VALF SPE  +W +N
Sbjct: 158 AVALFTSPE-DKWPKN 172


>ref|XP_002305655.1| f-box family protein [Populus trichocarpa]
           gi|222848619|gb|EEE86166.1| f-box family protein
           [Populus trichocarpa]
          Length = 189

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 40/70 (57%), Positives = 48/70 (68%), Gaps = 6/70 (8%)
 Frame = -1

Query: 420 LIAKRDHFAYSTPSKMV-FRRFGDMEI-----EDEAPNAPKQDRRNYRKSRIDGKKLGDI 259
           LIAK  HFAYSTP K   FR   D+E      E EAPNAPKQ RR+Y KSR++ K + D+
Sbjct: 114 LIAKESHFAYSTPRKSQGFRSPFDLENPGELDEIEAPNAPKQ-RRSY-KSRLNRKSIADV 171

Query: 258 TVALFHSPEK 229
           +VALF SP+K
Sbjct: 172 SVALFASPKK 181


>ref|XP_002316660.1| predicted protein [Populus trichocarpa] gi|222859725|gb|EEE97272.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 39/70 (55%), Positives = 47/70 (67%), Gaps = 6/70 (8%)
 Frame = -1

Query: 420 LIAKRDHFAYSTPSK-MVFRR---FGDMEIEDE--APNAPKQDRRNYRKSRIDGKKLGDI 259
           LIAK  HFAYSTP K   FR    FG+    DE  APNAPKQ RR+Y KS ++ K + D+
Sbjct: 114 LIAKEWHFAYSTPRKTQAFRTRIDFGNPSGLDEIEAPNAPKQ-RRSY-KSLLNRKSIADV 171

Query: 258 TVALFHSPEK 229
           +VALF SP+K
Sbjct: 172 SVALFASPKK 181