BLASTX nr result

ID: Coptis25_contig00029954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029954
         (616 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297945.1| predicted protein [Populus trichocarpa] gi|2...    75   1e-11
ref|XP_002272404.2| PREDICTED: probable LRR receptor-like serine...    74   2e-11
emb|CBI39030.3| unnamed protein product [Vitis vinifera]               72   8e-11
ref|XP_002273016.1| PREDICTED: probable LRR receptor-like serine...    72   8e-11
emb|CAN73140.1| hypothetical protein VITISV_019010 [Vitis vinifera]    72   8e-11

>ref|XP_002297945.1| predicted protein [Populus trichocarpa] gi|222845203|gb|EEE82750.1|
           predicted protein [Populus trichocarpa]
          Length = 1041

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 35/46 (76%), Positives = 40/46 (86%)
 Frame = +1

Query: 478 RSNAISYAGLRTATELFNPTIKLGEGGFGPVYKGMLSDGREIAVKK 615
           R N  SY+ LRTATE F+P+ KLGEGG+GPVYKGMLSDGRE+AVKK
Sbjct: 679 RPNTFSYSQLRTATEDFSPSNKLGEGGYGPVYKGMLSDGREVAVKK 724


>ref|XP_002272404.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g56130-like [Vitis vinifera]
          Length = 1037

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 36/55 (65%), Positives = 42/55 (76%)
 Frame = +1

Query: 451 IAELVVIDNRSNAISYAGLRTATELFNPTIKLGEGGFGPVYKGMLSDGREIAVKK 615
           +AE + I  R N  SY+ LRTATE FNP  KLGEGGFGPVYKG L+DGR +AVK+
Sbjct: 631 VAEFLGIGPRPNTFSYSELRTATEDFNPANKLGEGGFGPVYKGTLNDGRVVAVKQ 685


>emb|CBI39030.3| unnamed protein product [Vitis vinifera]
          Length = 2282

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 36/53 (67%), Positives = 41/53 (77%)
 Frame = +1

Query: 457 ELVVIDNRSNAISYAGLRTATELFNPTIKLGEGGFGPVYKGMLSDGREIAVKK 615
           EL+ I  R N  +YA LRTATE FNPT KLGEGGFGPVYKG L+D R +AVK+
Sbjct: 678 ELLGIGPRPNTFTYAELRTATEDFNPTNKLGEGGFGPVYKGKLNDERAVAVKQ 730



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 32/52 (61%), Positives = 37/52 (71%)
 Frame = +1

Query: 460  LVVIDNRSNAISYAGLRTATELFNPTIKLGEGGFGPVYKGMLSDGREIAVKK 615
            L+ +  R N   YA LRTATE F+ T KLGEGGFG VYKG L DGR +AVK+
Sbjct: 1942 LLGVGPRPNTFRYAELRTATENFSATNKLGEGGFGSVYKGTLPDGRVVAVKE 1993


>ref|XP_002273016.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g56130-like [Vitis vinifera]
          Length = 1048

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 36/53 (67%), Positives = 41/53 (77%)
 Frame = +1

Query: 457 ELVVIDNRSNAISYAGLRTATELFNPTIKLGEGGFGPVYKGMLSDGREIAVKK 615
           EL+ I  R N  +YA LRTATE FNPT KLGEGGFGPVYKG L+D R +AVK+
Sbjct: 678 ELLGIGPRPNTFTYAELRTATEDFNPTNKLGEGGFGPVYKGKLNDERAVAVKQ 730


>emb|CAN73140.1| hypothetical protein VITISV_019010 [Vitis vinifera]
          Length = 844

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 36/53 (67%), Positives = 41/53 (77%)
 Frame = +1

Query: 457 ELVVIDNRSNAISYAGLRTATELFNPTIKLGEGGFGPVYKGMLSDGREIAVKK 615
           EL+ I  R N  +YA LRTATE FNPT KLGEGGFGPVYKG L+D R +AVK+
Sbjct: 474 ELLGIGPRPNTFTYAELRTATEDFNPTNKLGEGGFGPVYKGKLNDERAVAVKQ 526


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