BLASTX nr result

ID: Coptis25_contig00029953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029953
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531987.1| conserved hypothetical protein [Ricinus comm...   124   1e-26
emb|CAN62371.1| hypothetical protein VITISV_001850 [Vitis vinifera]   121   7e-26
emb|CAN78177.1| hypothetical protein VITISV_037684 [Vitis vinifera]   118   6e-25
ref|XP_004143420.1| PREDICTED: EPIDERMAL PATTERNING FACTOR-like ...   114   6e-24
ref|XP_003517366.1| PREDICTED: EPIDERMAL PATTERNING FACTOR-like ...   110   9e-23

>ref|XP_002531987.1| conserved hypothetical protein [Ricinus communis]
           gi|223528346|gb|EEF30386.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 135

 Score =  124 bits (310), Expect = 1e-26
 Identities = 62/106 (58%), Positives = 73/106 (68%), Gaps = 7/106 (6%)
 Frame = -2

Query: 382 QVRYMVEGRTVPKLLDDQATSQVGGEVKAVMRGQIGSRPPRCDRRCSTCGHCEAVQVPAV 203
           QVR+  EGR  PK     + SQ   E K +MR QIGSRPPRC++RCSTCGHCEA+QVP  
Sbjct: 34  QVRFKAEGRATPK---SASFSQTVNEEKMLMRSQIGSRPPRCEKRCSTCGHCEAIQVPTN 90

Query: 202 PQAKSKSRHTTVS-------MRGEDAGSNYKPMSWKCKCGDMIFNP 86
           PQ    +R+ + S        RG+DA SNYKPMSWKCKCGD+IFNP
Sbjct: 91  PQINHGNRNYSSSTFSNVAYARGDDA-SNYKPMSWKCKCGDLIFNP 135


>emb|CAN62371.1| hypothetical protein VITISV_001850 [Vitis vinifera]
          Length = 534

 Score =  121 bits (303), Expect = 7e-26
 Identities = 62/104 (59%), Positives = 70/104 (67%), Gaps = 5/104 (4%)
 Frame = -2

Query: 382 QVRYMVEGRTVPKLLDDQATSQVGGEVKAVMRGQIGSRPPRCDRRCSTCGHCEAVQVPAV 203
           Q R+M EGR V KL+   A +  G E   VMR QIGSRPPRC RRCS+CGHCEAVQVP V
Sbjct: 431 QERFMAEGRLVSKLVGXVAQTYKGREEMVVMRNQIGSRPPRCQRRCSSCGHCEAVQVPIV 490

Query: 202 PQAKS-KSRH----TTVSMRGEDAGSNYKPMSWKCKCGDMIFNP 86
           PQ  S ++ H     TV     D  SNYKPM+WKCKCG+ IFNP
Sbjct: 491 PQLHSHRTSHFYAAPTVEYSRGDYISNYKPMTWKCKCGNAIFNP 534


>emb|CAN78177.1| hypothetical protein VITISV_037684 [Vitis vinifera]
          Length = 131

 Score =  118 bits (295), Expect = 6e-25
 Identities = 55/104 (52%), Positives = 73/104 (70%), Gaps = 5/104 (4%)
 Frame = -2

Query: 382 QVRYMVEGRTVPKLLDDQATSQVGGEVKAVMRGQIGSRPPRCDRRCSTCGHCEAVQVPAV 203
           Q+++M EGR V  L      SQ   E KA++R QIGSRPP+C+RRC++CGHCEA+QVPA 
Sbjct: 30  QLKFMAEGRAV--LFKPVGFSQPVSEEKAIVRAQIGSRPPKCERRCNSCGHCEAIQVPAN 87

Query: 202 PQAKSKSRHT-----TVSMRGEDAGSNYKPMSWKCKCGDMIFNP 86
           PQ K+ + ++     T++    D  SNYKPMSWKCKCG+ +FNP
Sbjct: 88  PQVKTPNTNSSTVVGTIAYSRGDDNSNYKPMSWKCKCGNFVFNP 131


>ref|XP_004143420.1| PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2-like [Cucumis
           sativus] gi|449525718|ref|XP_004169863.1| PREDICTED:
           EPIDERMAL PATTERNING FACTOR-like protein 2-like [Cucumis
           sativus]
          Length = 131

 Score =  114 bits (286), Expect = 6e-24
 Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 2/101 (1%)
 Frame = -2

Query: 382 QVRYMVEGRTVPKLLDDQATSQVGGEVKAVMRGQIGSRPPRCDRRCSTCGHCEAVQVPAV 203
           Q+R+M EGR + +       +    E K V+RGQIGSRPP+C+RRCS CGHCEA+QVPA 
Sbjct: 35  QMRFMAEGRFISR----NGKTVNNSEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPAN 90

Query: 202 PQAKSKSRHTTVS--MRGEDAGSNYKPMSWKCKCGDMIFNP 86
           PQ       +T+       D  SNYKPMSWKCKCG +IFNP
Sbjct: 91  PQKSGTKNSSTMKNIAYARDEASNYKPMSWKCKCGSLIFNP 131


>ref|XP_003517366.1| PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2-like [Glycine
           max]
          Length = 130

 Score =  110 bits (276), Expect = 9e-23
 Identities = 53/103 (51%), Positives = 69/103 (66%), Gaps = 4/103 (3%)
 Frame = -2

Query: 382 QVRYMVEGRTVPKLLDDQATSQVGGEVKAVMRGQIGSRPPRCDRRCSTCGHCEAVQVPAV 203
           Q+  + EGR  PK        Q   + KA++R QIGSRPP+C+RRC +CGHCEA+QVP  
Sbjct: 31  QMGLVTEGRKTPK---QNGFYQAVHDDKAMVRAQIGSRPPKCERRCRSCGHCEAIQVPTN 87

Query: 202 PQAK----SKSRHTTVSMRGEDAGSNYKPMSWKCKCGDMIFNP 86
           PQA+    + S  +T++    + GSNYKPMSWKCKCG+ IFNP
Sbjct: 88  PQAQNGKINSSTVSTIAFTMGEGGSNYKPMSWKCKCGNRIFNP 130


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