BLASTX nr result

ID: Coptis25_contig00029939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029939
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327569.1| predicted protein [Populus trichocarpa] gi|2...   165   4e-39
ref|XP_002526586.1| conserved hypothetical protein [Ricinus comm...   157   9e-37
gb|AFK43433.1| unknown [Lotus japonicus]                              157   1e-36
emb|CAN83659.1| hypothetical protein VITISV_004197 [Vitis vinifera]   156   2e-36
ref|NP_001239914.1| uncharacterized protein LOC100789045 [Glycin...   155   4e-36

>ref|XP_002327569.1| predicted protein [Populus trichocarpa] gi|222836123|gb|EEE74544.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score =  165 bits (417), Expect = 4e-39
 Identities = 76/96 (79%), Positives = 78/96 (81%)
 Frame = +2

Query: 83  EAQKYVWEGAIPLQIHLHESEXXXXXXXXXXXXXXXRIGYLPLLVPLIKPYFSSTLPPGS 262
           EAQKYVWEGAIPLQIHLHESE               RIGYLPLL+PLIKPYFSSTLPPG 
Sbjct: 3   EAQKYVWEGAIPLQIHLHESEITSLPPPSPALILAPRIGYLPLLLPLIKPYFSSTLPPGQ 62

Query: 263 DTVWFDYKGLPLKWYIPTGVLFDLLCMGPERPWNLT 370
           DT+WFDYKGLPLKWYIPTGVLFDLLC  PERPWNLT
Sbjct: 63  DTIWFDYKGLPLKWYIPTGVLFDLLCAQPERPWNLT 98


>ref|XP_002526586.1| conserved hypothetical protein [Ricinus communis]
           gi|223534080|gb|EEF35798.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 368

 Score =  157 bits (397), Expect = 9e-37
 Identities = 74/96 (77%), Positives = 76/96 (79%)
 Frame = +2

Query: 83  EAQKYVWEGAIPLQIHLHESEXXXXXXXXXXXXXXXRIGYLPLLVPLIKPYFSSTLPPGS 262
           EAQK VW GAIPLQIHLHESE               RIGYLPLL+PLIKP+FSSTLPPGS
Sbjct: 2   EAQKNVWGGAIPLQIHLHESEVTTHQRPPPALILGPRIGYLPLLIPLIKPHFSSTLPPGS 61

Query: 263 DTVWFDYKGLPLKWYIPTGVLFDLLCMGPERPWNLT 370
           DTVWFDY GLPLKWYIPTGVLFDLLC  PERPWNLT
Sbjct: 62  DTVWFDYHGLPLKWYIPTGVLFDLLCAQPERPWNLT 97


>gb|AFK43433.1| unknown [Lotus japonicus]
          Length = 349

 Score =  157 bits (396), Expect = 1e-36
 Identities = 71/97 (73%), Positives = 78/97 (80%)
 Frame = +2

Query: 80  TEAQKYVWEGAIPLQIHLHESEXXXXXXXXXXXXXXXRIGYLPLLVPLIKPYFSSTLPPG 259
           +EAQKYVWEGAIPLQIHLHESE               RIGYLPLL+ L+KP+FSSTLPPG
Sbjct: 2   SEAQKYVWEGAIPLQIHLHESEVTTLPPPPPALVLAPRIGYLPLLISLLKPHFSSTLPPG 61

Query: 260 SDTVWFDYKGLPLKWYIPTGVLFDLLCMGPERPWNLT 370
            DT+WF+YKGLPLKWYIPTGVLFDLLC+ PERPWN T
Sbjct: 62  QDTIWFEYKGLPLKWYIPTGVLFDLLCVEPERPWNPT 98


>emb|CAN83659.1| hypothetical protein VITISV_004197 [Vitis vinifera]
          Length = 359

 Score =  156 bits (394), Expect = 2e-36
 Identities = 71/99 (71%), Positives = 79/99 (79%)
 Frame = +2

Query: 74  VGTEAQKYVWEGAIPLQIHLHESEXXXXXXXXXXXXXXXRIGYLPLLVPLIKPYFSSTLP 253
           +G EAQKYVWEGAIPLQIHLHESE               R+GYLPLL+PL+KP+FSSTLP
Sbjct: 1   MGREAQKYVWEGAIPLQIHLHESEVTTLPHPSPALVLAPRMGYLPLLLPLLKPHFSSTLP 60

Query: 254 PGSDTVWFDYKGLPLKWYIPTGVLFDLLCMGPERPWNLT 370
           PG DT+WF+YKGLPLKW+IPTGVLFDLLC   ERPWNLT
Sbjct: 61  PGVDTIWFEYKGLPLKWHIPTGVLFDLLCAEQERPWNLT 99


>ref|NP_001239914.1| uncharacterized protein LOC100789045 [Glycine max]
           gi|255637617|gb|ACU19133.1| unknown [Glycine max]
          Length = 349

 Score =  155 bits (391), Expect = 4e-36
 Identities = 70/97 (72%), Positives = 78/97 (80%)
 Frame = +2

Query: 80  TEAQKYVWEGAIPLQIHLHESEXXXXXXXXXXXXXXXRIGYLPLLVPLIKPYFSSTLPPG 259
           +EAQK+VWEGAIPLQIHLHESE               R+GYLPLL+ L+KP FSSTLPPG
Sbjct: 2   SEAQKHVWEGAIPLQIHLHESEVTTLPPPPPALVLAPRLGYLPLLISLLKPQFSSTLPPG 61

Query: 260 SDTVWFDYKGLPLKWYIPTGVLFDLLCMGPERPWNLT 370
            DT+WF+YKGLPLKWYIPTGVLFDLLC+ PERPWNLT
Sbjct: 62  VDTIWFEYKGLPLKWYIPTGVLFDLLCVEPERPWNLT 98


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