BLASTX nr result

ID: Coptis25_contig00029938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029938
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329822.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
ref|XP_002269383.2| PREDICTED: uncharacterized protein LOC100253...    60   2e-07
emb|CBI23965.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_002329586.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
ref|XP_002528765.1| conserved hypothetical protein [Ricinus comm...    58   9e-07

>ref|XP_002329822.1| predicted protein [Populus trichocarpa] gi|222870884|gb|EEF08015.1|
           predicted protein [Populus trichocarpa]
          Length = 949

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/68 (42%), Positives = 43/68 (63%)
 Frame = +2

Query: 8   LAEKKALFVLLPLYLVGAFIAWGLYWWINHNEAPWRYGSISVYHGLSIWVYLRSYEGLLR 187
           ++EK+ L++ LP+Y+VG  IAW ++ W N + +P       VY     W  L+SY GL+ 
Sbjct: 767 ISEKRVLYLSLPMYIVGGLIAWYVHHWKNTSRSPHLLQGHKVYQQHYPWTDLKSYAGLVL 826

Query: 188 NGFLLPQI 211
           +GFLLPQI
Sbjct: 827 DGFLLPQI 834


>ref|XP_002269383.2| PREDICTED: uncharacterized protein LOC100253928 [Vitis vinifera]
          Length = 708

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
 Frame = +2

Query: 2   LLLAEKKALFVLLPLYLVGAFIAWGLYWWINHNEAP---WRYGSISVYHGLSIWVYLRSY 172
           L ++EKK L++ LPLY  GA IAW ++ W N  + P    R   ++     ++W  L+SY
Sbjct: 527 LWVSEKKVLYLSLPLYAGGALIAWFVHQWKNSYQIPLPRTRLAPVNYNQQHALWGELKSY 586

Query: 173 EGLLRNGFLLPQI 211
            GL+ +GFLLPQI
Sbjct: 587 AGLILDGFLLPQI 599


>emb|CBI23965.3| unnamed protein product [Vitis vinifera]
          Length = 604

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
 Frame = +2

Query: 2   LLLAEKKALFVLLPLYLVGAFIAWGLYWWINHNEAP---WRYGSISVYHGLSIWVYLRSY 172
           L ++EKK L++ LPLY  GA IAW ++ W N  + P    R   ++     ++W  L+SY
Sbjct: 423 LWVSEKKVLYLSLPLYAGGALIAWFVHQWKNSYQIPLPRTRLAPVNYNQQHALWGELKSY 482

Query: 173 EGLLRNGFLLPQI 211
            GL+ +GFLLPQI
Sbjct: 483 AGLILDGFLLPQI 495


>ref|XP_002329586.1| predicted protein [Populus trichocarpa] gi|222870295|gb|EEF07426.1|
           predicted protein [Populus trichocarpa]
          Length = 935

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/69 (47%), Positives = 40/69 (57%)
 Frame = +2

Query: 5   LLAEKKALFVLLPLYLVGAFIAWGLYWWINHNEAPWRYGSISVYHGLSIWVYLRSYEGLL 184
           L AEKK L++ LPLY+ G  IA  + W  N       Y   S Y   S+WV LRSY GL+
Sbjct: 761 LAAEKKTLYLSLPLYISGGLIALYVNWRNNKVGEGMEYAYSSTYQS-SLWVDLRSYGGLV 819

Query: 185 RNGFLLPQI 211
            +GFL PQI
Sbjct: 820 LDGFLFPQI 828


>ref|XP_002528765.1| conserved hypothetical protein [Ricinus communis]
           gi|223531768|gb|EEF33587.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 403

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/71 (46%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
 Frame = +2

Query: 2   LLLAEKKALFVLLPLYLVGAFIAWGLYWWINHNEAPWRYGSISVY-HGLSIWVYLRSYEG 178
           L +AEKK L+V LPLY+ G  IA  + W   + +      S S Y H  S+W+ LRSY G
Sbjct: 225 LWIAEKKTLYVCLPLYVAGGLIALSVNW--KNYKLGNEMNSTSFYRHQQSLWMDLRSYAG 282

Query: 179 LLRNGFLLPQI 211
           L+ +GFL PQI
Sbjct: 283 LVLDGFLFPQI 293


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