BLASTX nr result

ID: Coptis25_contig00029934 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029934
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160609.1| PREDICTED: 26S proteasome non-ATPase regulat...   182   2e-44
ref|XP_004151733.1| PREDICTED: 26S proteasome non-ATPase regulat...   182   2e-44
ref|XP_004141249.1| PREDICTED: 26S proteasome non-ATPase regulat...   182   2e-44
gb|AFK36477.1| unknown [Medicago truncatula]                          182   2e-44
ref|XP_003544454.1| PREDICTED: 26S proteasome non-ATPase regulat...   182   2e-44

>ref|XP_004160609.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 14-like
           [Cucumis sativus]
          Length = 309

 Score =  182 bits (463), Expect = 2e-44
 Identities = 89/105 (84%), Positives = 96/105 (91%)
 Frame = +1

Query: 1   VSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSLVDISTQQSFETLNKRAV 180
           VSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLS VDI+TQQSFE LN+RAV
Sbjct: 82  VSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAV 141

Query: 181 AMVIDPIQSVKGKVMIDAFRLFDQQRMRHRLEPRQTTSNLGNLNK 315
           A+V+DPIQSVKGKV+IDAFRL + Q M    EPRQTTSNLG+LNK
Sbjct: 142 AVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNK 186


>ref|XP_004151733.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 14-like,
           partial [Cucumis sativus]
          Length = 195

 Score =  182 bits (463), Expect = 2e-44
 Identities = 89/105 (84%), Positives = 96/105 (91%)
 Frame = +1

Query: 1   VSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSLVDISTQQSFETLNKRAV 180
           VSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLS VDI+TQQSFE LN+RAV
Sbjct: 82  VSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAV 141

Query: 181 AMVIDPIQSVKGKVMIDAFRLFDQQRMRHRLEPRQTTSNLGNLNK 315
           A+V+DPIQSVKGKV+IDAFRL + Q M    EPRQTTSNLG+LNK
Sbjct: 142 AVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNK 186


>ref|XP_004141249.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 14-like
           [Cucumis sativus] gi|449498695|ref|XP_004160608.1|
           PREDICTED: 26S proteasome non-ATPase regulatory subunit
           14-like [Cucumis sativus]
          Length = 309

 Score =  182 bits (463), Expect = 2e-44
 Identities = 89/105 (84%), Positives = 96/105 (91%)
 Frame = +1

Query: 1   VSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSLVDISTQQSFETLNKRAV 180
           VSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLS VDI+TQQSFE LN+RAV
Sbjct: 82  VSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAV 141

Query: 181 AMVIDPIQSVKGKVMIDAFRLFDQQRMRHRLEPRQTTSNLGNLNK 315
           A+V+DPIQSVKGKV+IDAFRL + Q M    EPRQTTSNLG+LNK
Sbjct: 142 AVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNK 186


>gb|AFK36477.1| unknown [Medicago truncatula]
          Length = 313

 Score =  182 bits (463), Expect = 2e-44
 Identities = 89/105 (84%), Positives = 96/105 (91%)
 Frame = +1

Query: 1   VSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSLVDISTQQSFETLNKRAV 180
           VSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLS VDI+TQQSFE LN+RAV
Sbjct: 86  VSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAV 145

Query: 181 AMVIDPIQSVKGKVMIDAFRLFDQQRMRHRLEPRQTTSNLGNLNK 315
           A+V+DPIQSVKGKV+IDAFRL + Q M    EPRQTTSNLG+LNK
Sbjct: 146 AVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNK 190


>ref|XP_003544454.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 14-like
           [Glycine max] gi|356564198|ref|XP_003550343.1|
           PREDICTED: 26S proteasome non-ATPase regulatory subunit
           14-like [Glycine max]
          Length = 312

 Score =  182 bits (463), Expect = 2e-44
 Identities = 89/105 (84%), Positives = 96/105 (91%)
 Frame = +1

Query: 1   VSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSLVDISTQQSFETLNKRAV 180
           VSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLS VDI+TQQSFE LN+RAV
Sbjct: 85  VSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAV 144

Query: 181 AMVIDPIQSVKGKVMIDAFRLFDQQRMRHRLEPRQTTSNLGNLNK 315
           A+V+DPIQSVKGKV+IDAFRL + Q M    EPRQTTSNLG+LNK
Sbjct: 145 AVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNK 189


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