BLASTX nr result

ID: Coptis25_contig00029916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029916
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272509.2| PREDICTED: receptor-like serine/threonine-pr...    60   2e-07
emb|CBI39910.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_003634654.1| PREDICTED: receptor-like serine/threonine-pr...    59   5e-07
ref|XP_002281224.2| PREDICTED: uncharacterized protein LOC100245...    57   1e-06
emb|CBI20412.3| unnamed protein product [Vitis vinifera]               57   1e-06

>ref|XP_002272509.2| PREDICTED: receptor-like serine/threonine-protein kinase SD1-8-like
           [Vitis vinifera]
          Length = 865

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 10/121 (8%)
 Frame = -2

Query: 334 DLLSLQKAPDGDGSGIDLYLRLAASDINFSMGKKPLKAYIIVLIAGSSFISILACVFLAY 155
           DLL+LQ+  D + +G D YL+LAAS+++  +     K ++IV +A  S  S      +  
Sbjct: 435 DLLNLQQLSDDNSNGQDFYLKLAASELSGKVSSSKWKVWLIVTLA-ISVTSAFVIWGIRR 493

Query: 154 KMKQRGD----------SGKTRYEGREISLSDLSKTHEVERGKLEIPSFDFDTVSAATKN 5
           +++++G+          S  T YE     LS+ SK    E+ ++++P F F +VSAAT N
Sbjct: 494 RLRRKGENLLLFDLSNSSVDTNYE-----LSETSKLWSGEKKEVDLPMFSFASVSAATNN 548

Query: 4   F 2
           F
Sbjct: 549 F 549


>emb|CBI39910.3| unnamed protein product [Vitis vinifera]
          Length = 674

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 40/126 (31%), Positives = 68/126 (53%), Gaps = 15/126 (11%)
 Frame = -2

Query: 334 DLLSLQKAPDGDGSGIDLYLRLAASDINFSMGKKPLKAYIIVLIAGSSFISILACVFLAY 155
           DL+++++ PDGD +G   Y++LAAS++N  +     K ++IV +A S     L   F+ Y
Sbjct: 243 DLVNVEQLPDGDSNGRSFYIKLAASELNKRVSSSEWKVWLIVTLAIS-----LTSAFVIY 297

Query: 154 KMKQRGDSGKTRYEGREISLSD------------LSKTHEVERG---KLEIPSFDFDTVS 20
                G  G+ R +G ++ L D            L +T+ + RG   ++++P F F +VS
Sbjct: 298 -----GIWGRFRRKGEDLLLFDFGNSSEDTSCYELGETNRLWRGEKKEVDLPMFSFASVS 352

Query: 19  AATKNF 2
           A+T NF
Sbjct: 353 ASTNNF 358


>ref|XP_003634654.1| PREDICTED: receptor-like serine/threonine-protein kinase SD1-8-like
           [Vitis vinifera]
          Length = 830

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 38/125 (30%), Positives = 68/125 (54%), Gaps = 14/125 (11%)
 Frame = -2

Query: 334 DLLSLQKAPDGDGSGIDLYLRLAASDINFSMGKKPLKAYIIVLIAGSSFISILACVFLAY 155
           DL+++++ PDGD +G   Y++LAAS++N  +     K ++I+ +A S     L   F+ Y
Sbjct: 400 DLVNVEQLPDGDSNGRSFYIKLAASELNKRVSSSKWKVWLIITLAIS-----LTSAFVIY 454

Query: 154 KMKQRGDSGKTRYEGREISLSD-----------LSKTHEVERG---KLEIPSFDFDTVSA 17
                G  G+ R +G ++ + D           L +T+ + RG   ++++P F F +VSA
Sbjct: 455 -----GIWGRFRRKGEDLLVFDFGNSSEDTSYELDETNRLWRGEKREVDLPMFSFASVSA 509

Query: 16  ATKNF 2
           +T NF
Sbjct: 510 STNNF 514


>ref|XP_002281224.2| PREDICTED: uncharacterized protein LOC100245158 [Vitis vinifera]
          Length = 1658

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/121 (28%), Positives = 66/121 (54%), Gaps = 10/121 (8%)
 Frame = -2

Query: 334  DLLSLQKAPDGDGSGIDLYLRLAASDINFSMGKKPLKAYIIVLIAGSSFISILACVFLAY 155
            DL+++++ PDGD +    Y++LAAS++N  +     K ++IV +A S     L  VF+ Y
Sbjct: 1228 DLVNVEQLPDGDSNARSFYIKLAASELNKRVSTSKWKVWLIVTLAIS-----LTSVFVNY 1282

Query: 154  ----KMKQRG------DSGKTRYEGREISLSDLSKTHEVERGKLEIPSFDFDTVSAATKN 5
                + +++G      D G +  +     L + ++    E+ ++++P F F +VSA+T N
Sbjct: 1283 GIWRRFRRKGEDLLVFDFGNSSEDTNCYELGETNRLWRDEKKEVDLPMFSFASVSASTNN 1342

Query: 4    F 2
            F
Sbjct: 1343 F 1343


>emb|CBI20412.3| unnamed protein product [Vitis vinifera]
          Length = 570

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/121 (28%), Positives = 66/121 (54%), Gaps = 10/121 (8%)
 Frame = -2

Query: 334 DLLSLQKAPDGDGSGIDLYLRLAASDINFSMGKKPLKAYIIVLIAGSSFISILACVFLAY 155
           DL+++++ PDGD +    Y++LAAS++N  +     K ++IV +A S     L  VF+ Y
Sbjct: 141 DLVNVEQLPDGDSNARSFYIKLAASELNKRVSTSKWKVWLIVTLAIS-----LTSVFVNY 195

Query: 154 ----KMKQRG------DSGKTRYEGREISLSDLSKTHEVERGKLEIPSFDFDTVSAATKN 5
               + +++G      D G +  +     L + ++    E+ ++++P F F +VSA+T N
Sbjct: 196 GIWRRFRRKGEDLLVFDFGNSSEDTNCYELGETNRLWRDEKKEVDLPMFSFASVSASTNN 255

Query: 4   F 2
           F
Sbjct: 256 F 256


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