BLASTX nr result

ID: Coptis25_contig00029910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029910
         (810 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268396.1| PREDICTED: uncharacterized protein LOC100241...   504   e-140
emb|CAN83582.1| hypothetical protein VITISV_001564 [Vitis vinifera]   504   e-140
ref|XP_004150389.1| PREDICTED: uncharacterized protein LOC101212...   491   e-136
ref|XP_002527690.1| conserved hypothetical protein [Ricinus comm...   491   e-136
ref|XP_002324663.1| predicted protein [Populus trichocarpa] gi|2...   485   e-135

>ref|XP_002268396.1| PREDICTED: uncharacterized protein LOC100241048 [Vitis vinifera]
          Length = 565

 Score =  504 bits (1297), Expect = e-140
 Identities = 224/262 (85%), Positives = 250/262 (95%)
 Frame = -2

Query: 809  GDSMNRNQFESILCLLREGLSNKSRMYEIHGYKITKGRGYYVFKFEDYNCTVEFVRSHFL 630
            GDSMNRNQFES+LCLL EGL +KSRMYEIHG+KITKGRGY+VF F DYNCTVEFVRSHFL
Sbjct: 294  GDSMNRNQFESLLCLLHEGLPDKSRMYEIHGHKITKGRGYFVFNFADYNCTVEFVRSHFL 353

Query: 629  VKEGTRTNGQGGSNPTLSIDRIDKSAGRWKRADILVFNTGHWWTHGKTARGKNYYKEGDV 450
            V+EGTR NGQG SNPTLSIDRIDKSAGRWKRADILVFNTGHWWTHGKTARGKNYYKEGDV
Sbjct: 354  VREGTRINGQGNSNPTLSIDRIDKSAGRWKRADILVFNTGHWWTHGKTARGKNYYKEGDV 413

Query: 449  IYPRFDAIEAYRRAMRTWGMWIDENIDPTKKLVFYRGYSSAHFRGGDWDSGGTCNGEKEP 270
            +YP+FDA+EAYRR++RTWG WID+N++P K+LVFYRGYSSAHFRGGDWDSGG CNGE EP
Sbjct: 414  VYPKFDAVEAYRRSLRTWGRWIDKNVNPAKQLVFYRGYSSAHFRGGDWDSGGACNGETEP 473

Query: 269  ILTGAFLNSYPLKMKIVEEVIHKMKVPVILLNVTRLTNFRKDGHPSIYSKNVTDGRKIST 90
            IL+GAFLN+YPLKMKIVEEVI +M+VPVILLNVTRLTNFRKDGHPS+Y KN+T+G+++ST
Sbjct: 474  ILSGAFLNNYPLKMKIVEEVIQEMQVPVILLNVTRLTNFRKDGHPSVYGKNITEGKRVST 533

Query: 89   RRQDCSHWCVPGVPDAWNELIY 24
            R+QDCSHWC+PGVPDAWNELIY
Sbjct: 534  RKQDCSHWCLPGVPDAWNELIY 555


>emb|CAN83582.1| hypothetical protein VITISV_001564 [Vitis vinifera]
          Length = 1199

 Score =  504 bits (1297), Expect = e-140
 Identities = 224/262 (85%), Positives = 250/262 (95%)
 Frame = -2

Query: 809  GDSMNRNQFESILCLLREGLSNKSRMYEIHGYKITKGRGYYVFKFEDYNCTVEFVRSHFL 630
            GDSMNRNQFES+LCLL EGL +KSRMYEIHG+KITKGRGY+VF F DYNCTVEFVRSHFL
Sbjct: 928  GDSMNRNQFESLLCLLHEGLPDKSRMYEIHGHKITKGRGYFVFNFADYNCTVEFVRSHFL 987

Query: 629  VKEGTRTNGQGGSNPTLSIDRIDKSAGRWKRADILVFNTGHWWTHGKTARGKNYYKEGDV 450
            V+EGTR NGQG SNPTLSIDRIDKSAGRWKRADILVFNTGHWWTHGKTARGKNYYKEGDV
Sbjct: 988  VREGTRINGQGNSNPTLSIDRIDKSAGRWKRADILVFNTGHWWTHGKTARGKNYYKEGDV 1047

Query: 449  IYPRFDAIEAYRRAMRTWGMWIDENIDPTKKLVFYRGYSSAHFRGGDWDSGGTCNGEKEP 270
            +YP+FDA+EAYRR++RTWG WID+N++P K+LVFYRGYSSAHFRGGDWDSGG CNGE EP
Sbjct: 1048 VYPKFDAVEAYRRSLRTWGRWIDKNVNPAKQLVFYRGYSSAHFRGGDWDSGGACNGETEP 1107

Query: 269  ILTGAFLNSYPLKMKIVEEVIHKMKVPVILLNVTRLTNFRKDGHPSIYSKNVTDGRKIST 90
            IL+GAFLN+YPLKMKIVEEVI +M+VPVILLNVTRLTNFRKDGHPS+Y KN+T+G+++ST
Sbjct: 1108 ILSGAFLNNYPLKMKIVEEVIQEMQVPVILLNVTRLTNFRKDGHPSVYGKNITEGKRVST 1167

Query: 89   RRQDCSHWCVPGVPDAWNELIY 24
            R+QDCSHWC+PGVPDAWNELIY
Sbjct: 1168 RKQDCSHWCLPGVPDAWNELIY 1189


>ref|XP_004150389.1| PREDICTED: uncharacterized protein LOC101212427 [Cucumis sativus]
            gi|449508222|ref|XP_004163254.1| PREDICTED:
            uncharacterized protein LOC101227443 [Cucumis sativus]
          Length = 479

 Score =  491 bits (1263), Expect = e-136
 Identities = 220/266 (82%), Positives = 248/266 (93%)
 Frame = -2

Query: 809  GDSMNRNQFESILCLLREGLSNKSRMYEIHGYKITKGRGYYVFKFEDYNCTVEFVRSHFL 630
            GDSMNRNQFESILCLLREGL +K+RM+E HGYKITKGRGY+VFKF+DY+CTVEFVRSHFL
Sbjct: 205  GDSMNRNQFESILCLLREGLQDKNRMFETHGYKITKGRGYFVFKFKDYDCTVEFVRSHFL 264

Query: 629  VKEGTRTNGQGGSNPTLSIDRIDKSAGRWKRADILVFNTGHWWTHGKTARGKNYYKEGDV 450
            V+EG R N QG SNPTLSIDRIDK++GRWKRADILVFNTGHWWTHGKTARGKNYYKEG+V
Sbjct: 265  VREGVRINAQGNSNPTLSIDRIDKTSGRWKRADILVFNTGHWWTHGKTARGKNYYKEGEV 324

Query: 449  IYPRFDAIEAYRRAMRTWGMWIDENIDPTKKLVFYRGYSSAHFRGGDWDSGGTCNGEKEP 270
            +YP+FDA+EAYRRA++TWG WID NI+P K+LVFYRGYSSAHFRGGDWDSGG+CNGE EP
Sbjct: 325  LYPQFDAVEAYRRALKTWGNWIDNNINPAKQLVFYRGYSSAHFRGGDWDSGGSCNGETEP 384

Query: 269  ILTGAFLNSYPLKMKIVEEVIHKMKVPVILLNVTRLTNFRKDGHPSIYSKNVTDGRKIST 90
            +L+GA L++YPLKMKIVEE I +M+VPVILLNVTRLTNFRKDGHPSIY KN T  RK+ST
Sbjct: 385  VLSGAILDNYPLKMKIVEETIKEMRVPVILLNVTRLTNFRKDGHPSIYGKNHTAARKVST 444

Query: 89   RRQDCSHWCVPGVPDAWNELIYVSLI 12
            RRQDCSHWC+PGVPDAWNELIY +L+
Sbjct: 445  RRQDCSHWCLPGVPDAWNELIYAALV 470


>ref|XP_002527690.1| conserved hypothetical protein [Ricinus communis]
            gi|223532921|gb|EEF34689.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 537

 Score =  491 bits (1263), Expect = e-136
 Identities = 219/266 (82%), Positives = 246/266 (92%)
 Frame = -2

Query: 809  GDSMNRNQFESILCLLREGLSNKSRMYEIHGYKITKGRGYYVFKFEDYNCTVEFVRSHFL 630
            GDSMNRNQFESILC+LREGL +K RM+EIHG+KITKGRGYYVFKF D+NCTVEFVRSHFL
Sbjct: 264  GDSMNRNQFESILCILREGLPDKERMHEIHGHKITKGRGYYVFKFMDFNCTVEFVRSHFL 323

Query: 629  VKEGTRTNGQGGSNPTLSIDRIDKSAGRWKRADILVFNTGHWWTHGKTARGKNYYKEGDV 450
            V+EG R N QG SNPTLSIDRIDK++GRWKRADILVFNTGHWWTHGKTARGKNYYKEGD 
Sbjct: 324  VREGVRINAQGNSNPTLSIDRIDKTSGRWKRADILVFNTGHWWTHGKTARGKNYYKEGDY 383

Query: 449  IYPRFDAIEAYRRAMRTWGMWIDENIDPTKKLVFYRGYSSAHFRGGDWDSGGTCNGEKEP 270
            +YP+FDA+EAYRRA+RTW  WID+NI+P K+LVFYRGYSSAHFRGGDWDSGG+CNGE EP
Sbjct: 384  LYPKFDAVEAYRRALRTWAKWIDDNINPAKQLVFYRGYSSAHFRGGDWDSGGSCNGETEP 443

Query: 269  ILTGAFLNSYPLKMKIVEEVIHKMKVPVILLNVTRLTNFRKDGHPSIYSKNVTDGRKIST 90
            IL+G  LN+YPLKMKIVEEVI +MK+PV LLNVTRLTNFRKDGHPS++ KN T G+K+ST
Sbjct: 444  ILSGTMLNNYPLKMKIVEEVIREMKIPVKLLNVTRLTNFRKDGHPSVFGKNATAGKKVST 503

Query: 89   RRQDCSHWCVPGVPDAWNELIYVSLI 12
            RRQDCSHWC+PGVPDAWNELIY +L+
Sbjct: 504  RRQDCSHWCLPGVPDAWNELIYANLV 529


>ref|XP_002324663.1| predicted protein [Populus trichocarpa] gi|222866097|gb|EEF03228.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score =  485 bits (1249), Expect = e-135
 Identities = 220/266 (82%), Positives = 242/266 (90%)
 Frame = -2

Query: 809 GDSMNRNQFESILCLLREGLSNKSRMYEIHGYKITKGRGYYVFKFEDYNCTVEFVRSHFL 630
           GDSMNRNQFES+LCLLREGL +KS+M+EIHG KITKGRGYYVFKF DY CTVEFVRSHFL
Sbjct: 80  GDSMNRNQFESMLCLLREGLPDKSKMFEIHGNKITKGRGYYVFKFVDYECTVEFVRSHFL 139

Query: 629 VKEGTRTNGQGGSNPTLSIDRIDKSAGRWKRADILVFNTGHWWTHGKTARGKNYYKEGDV 450
           VKEG R N QG SNPTLSID IDK+AGRWKRADILVFNTGHWW HGKTARGKNYYKEGD 
Sbjct: 140 VKEGVRINAQGSSNPTLSIDVIDKTAGRWKRADILVFNTGHWWAHGKTARGKNYYKEGDY 199

Query: 449 IYPRFDAIEAYRRAMRTWGMWIDENIDPTKKLVFYRGYSSAHFRGGDWDSGGTCNGEKEP 270
           +YP+FDA+EAYRRA++TW  WID+N+DP K+LVFYRGYSSAHFRGGDWDSGGTCNGE EP
Sbjct: 200 LYPKFDAVEAYRRALKTWAKWIDQNVDPKKQLVFYRGYSSAHFRGGDWDSGGTCNGETEP 259

Query: 269 ILTGAFLNSYPLKMKIVEEVIHKMKVPVILLNVTRLTNFRKDGHPSIYSKNVTDGRKIST 90
           +L+GA LN+YP+KMKIVEEVI +MK PV LLNVTRLTNFRKDGHPSI+ KN T G K+ST
Sbjct: 260 VLSGAILNNYPVKMKIVEEVIQEMKNPVTLLNVTRLTNFRKDGHPSIFGKNATAGIKVST 319

Query: 89  RRQDCSHWCVPGVPDAWNELIYVSLI 12
           RRQDCSHWCVPGVPDAWNELIY +L+
Sbjct: 320 RRQDCSHWCVPGVPDAWNELIYATLL 345


Top