BLASTX nr result

ID: Coptis25_contig00029906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029906
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148387.1| PREDICTED: carotenoid cleavage dioxygenase 8...    67   2e-09
gb|ADP37984.1| carotenoid cleavage dioxygenase 8 [Actinidia chin...    66   3e-09
ref|XP_003522713.1| PREDICTED: carotenoid cleavage dioxygenase 8...    64   1e-08
ref|XP_002324797.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
gb|AAW59435.1| decreased apical dominance protein [Petunia x hyb...    64   2e-08

>ref|XP_004148387.1| PREDICTED: carotenoid cleavage dioxygenase 8, chloroplastic-like
           [Cucumis sativus] gi|449531816|ref|XP_004172881.1|
           PREDICTED: carotenoid cleavage dioxygenase 8,
           chloroplastic-like [Cucumis sativus]
          Length = 547

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 27/31 (87%), Positives = 29/31 (93%)
 Frame = -2

Query: 245 LLDGSTFKEIARAKFPYGLPYGLHACWIPNN 153
           LLDGSTF+EIARAKFPYGLPYGLH CW+P N
Sbjct: 517 LLDGSTFEEIARAKFPYGLPYGLHGCWVPKN 547


>gb|ADP37984.1| carotenoid cleavage dioxygenase 8 [Actinidia chinensis]
          Length = 556

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 27/31 (87%), Positives = 29/31 (93%)
 Frame = -2

Query: 245 LLDGSTFKEIARAKFPYGLPYGLHACWIPNN 153
           +LDGSTF+EIARAKFPYGLPYGLH CWIP N
Sbjct: 526 VLDGSTFEEIARAKFPYGLPYGLHGCWIPKN 556


>ref|XP_003522713.1| PREDICTED: carotenoid cleavage dioxygenase 8, chloroplastic-like
           [Glycine max]
          Length = 549

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = -2

Query: 245 LLDGSTFKEIARAKFPYGLPYGLHACWIP 159
           LLDGSTF+EIARAKFPYGLPYGLH CW+P
Sbjct: 519 LLDGSTFEEIARAKFPYGLPYGLHGCWVP 547


>ref|XP_002324797.1| predicted protein [Populus trichocarpa] gi|222866231|gb|EEF03362.1|
           predicted protein [Populus trichocarpa]
          Length = 538

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = -2

Query: 245 LLDGSTFKEIARAKFPYGLPYGLHACWIP 159
           LLDGSTF+EIARAKFPYGLPYGLH CW+P
Sbjct: 508 LLDGSTFEEIARAKFPYGLPYGLHGCWVP 536


>gb|AAW59435.1| decreased apical dominance protein [Petunia x hybrida]
          Length = 556

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 25/29 (86%), Positives = 28/29 (96%)
 Frame = -2

Query: 245 LLDGSTFKEIARAKFPYGLPYGLHACWIP 159
           +LDGSTF+EIARAKFPYGLPYGLH CW+P
Sbjct: 526 ILDGSTFEEIARAKFPYGLPYGLHGCWVP 554


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