BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029903
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271062.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   125   3e-27
ref|XP_002267134.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   118   6e-25
emb|CAN79596.1| hypothetical protein VITISV_042386 [Vitis vinifera]   118   6e-25
gb|ABR17677.1| unknown [Picea sitchensis]                             117   1e-24
ref|XP_001777565.1| predicted protein [Physcomitrella patens sub...   114   6e-24

>ref|XP_002271062.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 312

 Score =  125 bits (315), Expect = 3e-27
 Identities = 57/80 (71%), Positives = 67/80 (83%), Gaps = 1/80 (1%)
 Frame = -1

Query: 238 SSPASKASIESMPTIKITSSFLGRDSVL-CAVCKDEFFIDVEAKQLPCNHIYHCECILPW 62
           S  AS+AS+E++PT KIT SFL  D +L CAVCKD+F +DVEAK+LPCNHIYH +CILPW
Sbjct: 120 SVAASRASLEALPTFKITPSFLQLDPILFCAVCKDQFVVDVEAKRLPCNHIYHSDCILPW 179

Query: 61  LSQHNSCPVCRFLLPTDENE 2
           LSQ NSCP+CRF LPTDE E
Sbjct: 180 LSQQNSCPLCRFRLPTDEGE 199


>ref|XP_002267134.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Vitis
           vinifera] gi|359491811|ref|XP_003634328.1| PREDICTED: E3
           ubiquitin-protein ligase RING1 isoform 2 [Vitis
           vinifera]
          Length = 369

 Score =  118 bits (295), Expect = 6e-25
 Identities = 51/75 (68%), Positives = 60/75 (80%)
 Frame = -1

Query: 232 PASKASIESMPTIKITSSFLGRDSVLCAVCKDEFFIDVEAKQLPCNHIYHCECILPWLSQ 53
           PASK++IE +PTI+IT   LG DS  CAVCKD F +D EAKQ+PC HIYH +CILPWL  
Sbjct: 191 PASKSAIEGLPTIRITVELLGTDSSQCAVCKDSFELDEEAKQMPCKHIYHNDCILPWLEL 250

Query: 52  HNSCPVCRFLLPTDE 8
           HNSCPVCR+ LPTD+
Sbjct: 251 HNSCPVCRYELPTDD 265


>emb|CAN79596.1| hypothetical protein VITISV_042386 [Vitis vinifera]
          Length = 371

 Score =  118 bits (295), Expect = 6e-25
 Identities = 51/75 (68%), Positives = 60/75 (80%)
 Frame = -1

Query: 232 PASKASIESMPTIKITSSFLGRDSVLCAVCKDEFFIDVEAKQLPCNHIYHCECILPWLSQ 53
           PASK++IE +PTI+IT   LG DS  CAVCKD F +D EAKQ+PC HIYH +CILPWL  
Sbjct: 193 PASKSAIEGLPTIRITVELLGTDSSQCAVCKDSFELDEEAKQMPCKHIYHNDCILPWLEL 252

Query: 52  HNSCPVCRFLLPTDE 8
           HNSCPVCR+ LPTD+
Sbjct: 253 HNSCPVCRYELPTDD 267


>gb|ABR17677.1| unknown [Picea sitchensis]
          Length = 451

 Score =  117 bits (292), Expect = 1e-24
 Identities = 51/77 (66%), Positives = 59/77 (76%)
 Frame = -1

Query: 232 PASKASIESMPTIKITSSFLGRDSVLCAVCKDEFFIDVEAKQLPCNHIYHCECILPWLSQ 53
           PASKASI +MPTIKIT   L  DS  CAVCKDEF +  E +Q+PC H+YH  CILPWL Q
Sbjct: 206 PASKASIGTMPTIKITQDLLVTDSTQCAVCKDEFEVGTEVRQMPCKHMYHSVCILPWLEQ 265

Query: 52  HNSCPVCRFLLPTDENE 2
           HNSCPVCR+ +PTD+ E
Sbjct: 266 HNSCPVCRYEMPTDDVE 282


>ref|XP_001777565.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162671050|gb|EDQ57608.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 560

 Score =  114 bits (286), Expect = 6e-24
 Identities = 45/76 (59%), Positives = 63/76 (82%)
 Frame = -1

Query: 232 PASKASIESMPTIKITSSFLGRDSVLCAVCKDEFFIDVEAKQLPCNHIYHCECILPWLSQ 53
           PASK+++E+MPTI+I+   LG D++ CAVCKDEF +    +Q+PC H+YH +CILPWL+Q
Sbjct: 340 PASKSAVEAMPTIQISQEHLGTDAMQCAVCKDEFELGALVRQMPCKHMYHADCILPWLAQ 399

Query: 52  HNSCPVCRFLLPTDEN 5
           HNSCPVCR+ +PTD++
Sbjct: 400 HNSCPVCRYEMPTDDH 415