BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029898
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein lig...    74   1e-11
emb|CBI19874.3| unnamed protein product [Vitis vinifera]               74   1e-11
emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera]    74   1e-11
ref|XP_003591660.1| U-box domain-containing protein [Medicago tr...    69   3e-10
sp|D1FP53.1|LIN_MEDTR RecName: Full=Putative E3 ubiquitin-protei...    69   3e-10

>ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
           vinifera]
          Length = 1494

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/63 (58%), Positives = 43/63 (68%)
 Frame = +2

Query: 23  NTQILENSYHNESEDEGXXXXXXXXXXGKLTPLNRPPKDYICPITSQLLSDPVTLETGQT 202
           N Q+ ENS  NE+ DEG           KLTP +RPPKD++CPIT Q+ SD VTLETGQT
Sbjct: 484 NRQVSENSSLNEN-DEGSQSCISLPLSDKLTPRSRPPKDFVCPITGQIFSDAVTLETGQT 542

Query: 203 YER 211
           YER
Sbjct: 543 YER 545


>emb|CBI19874.3| unnamed protein product [Vitis vinifera]
          Length = 1510

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/63 (58%), Positives = 43/63 (68%)
 Frame = +2

Query: 23  NTQILENSYHNESEDEGXXXXXXXXXXGKLTPLNRPPKDYICPITSQLLSDPVTLETGQT 202
           N Q+ ENS  NE+ DEG           KLTP +RPPKD++CPIT Q+ SD VTLETGQT
Sbjct: 500 NRQVSENSSLNEN-DEGSQSCISLPLSDKLTPRSRPPKDFVCPITGQIFSDAVTLETGQT 558

Query: 203 YER 211
           YER
Sbjct: 559 YER 561


>emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera]
          Length = 1494

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/63 (58%), Positives = 43/63 (68%)
 Frame = +2

Query: 23  NTQILENSYHNESEDEGXXXXXXXXXXGKLTPLNRPPKDYICPITSQLLSDPVTLETGQT 202
           N Q+ ENS  NE+ DEG           KLTP +RPPKD++CPIT Q+ SD VTLETGQT
Sbjct: 484 NRQVSENSSLNEN-DEGSQSCISLPLSDKLTPRSRPPKDFVCPITGQIFSDAVTLETGQT 542

Query: 203 YER 211
           YER
Sbjct: 543 YER 545


>ref|XP_003591660.1| U-box domain-containing protein [Medicago truncatula]
           gi|358346073|ref|XP_003637097.1| U-box domain-containing
           protein [Medicago truncatula]
           gi|355480708|gb|AES61911.1| U-box domain-containing
           protein [Medicago truncatula]
           gi|355503032|gb|AES84235.1| U-box domain-containing
           protein [Medicago truncatula]
          Length = 1490

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 35/63 (55%), Positives = 43/63 (68%)
 Frame = +2

Query: 23  NTQILENSYHNESEDEGXXXXXXXXXXGKLTPLNRPPKDYICPITSQLLSDPVTLETGQT 202
           N+ +L +S H ESED G           KLT  ++PPKD++CPIT Q+ SDPVTLETGQT
Sbjct: 481 NSLVLNDSSHCESED-GYQSSSSFPKLEKLTIGSKPPKDFVCPITGQIFSDPVTLETGQT 539

Query: 203 YER 211
           YER
Sbjct: 540 YER 542


>sp|D1FP53.1|LIN_MEDTR RecName: Full=Putative E3 ubiquitin-protein ligase LIN; Short=MtLIN
           gi|219522090|gb|ACL14419.1| putative E3 ubiquitin ligase
           [Medicago truncatula] gi|219522092|gb|ACL14420.1|
           putative E3 ubiquitin ligase [Medicago truncatula]
          Length = 1488

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 35/63 (55%), Positives = 43/63 (68%)
 Frame = +2

Query: 23  NTQILENSYHNESEDEGXXXXXXXXXXGKLTPLNRPPKDYICPITSQLLSDPVTLETGQT 202
           N+ +L +S H ESED G           KLT  ++PPKD++CPIT Q+ SDPVTLETGQT
Sbjct: 479 NSLVLNDSSHCESED-GYQSSSSFPKLEKLTIGSKPPKDFVCPITGQIFSDPVTLETGQT 537

Query: 203 YER 211
           YER
Sbjct: 538 YER 540