BLASTX nr result

ID: Coptis25_contig00029889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029889
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA56286.1| TPA: hypothetical protein ZEAMMB73_851729 [Zea m...   181   5e-44
emb|CBI17697.3| unnamed protein product [Vitis vinifera]              179   2e-43
ref|NP_001145103.1| uncharacterized protein LOC100278318 [Zea ma...   179   2e-43
ref|XP_002456801.1| hypothetical protein SORBIDRAFT_03g043050 [S...   179   3e-43
ref|XP_004145682.1| PREDICTED: uncharacterized protein LOC101219...   176   2e-42

>tpg|DAA56286.1| TPA: hypothetical protein ZEAMMB73_851729 [Zea mays]
          Length = 138

 Score =  181 bits (459), Expect = 5e-44
 Identities = 89/115 (77%), Positives = 100/115 (86%), Gaps = 1/115 (0%)
 Frame = +2

Query: 53  MMHALQRTLRSIHSTV-QPPKLTKLSLHPPKCVEMEFADGSLFNLSAEFLRVYSPAADSK 229
           M  AL   LR +H+   QPP+LTK +LHPPK VE+EFADGS F+LSAEFLRVYSPAADSK
Sbjct: 1   MAAALGAVLRRLHTAAAQPPRLTKFALHPPKFVEIEFADGSSFHLSAEFLRVYSPAADSK 60

Query: 230 IRSVGGEKVIFGRRHVGIMSAEVVGNYGIRIVFDDLHKTGIYTYSYFYHLGSNKF 394
           IRSVGGEKVIFGRRHVGIMSAE VGNYG+RI+FDDLHKTGI+T+ Y +HLGSNKF
Sbjct: 61  IRSVGGEKVIFGRRHVGIMSAESVGNYGVRILFDDLHKTGIFTWDYLHHLGSNKF 115


>emb|CBI17697.3| unnamed protein product [Vitis vinifera]
          Length = 405

 Score =  179 bits (455), Expect = 2e-43
 Identities = 90/124 (72%), Positives = 105/124 (84%)
 Frame = +2

Query: 23  SNLVNVGEQAMMHALQRTLRSIHSTVQPPKLTKLSLHPPKCVEMEFADGSLFNLSAEFLR 202
           S  V    +AM+  L R +RSIH+T   P+LTK SLHPPK VE++F +GS FNLSAEFLR
Sbjct: 263 SRRVTNRREAMLARL-RGVRSIHTT---PRLTKFSLHPPKTVEVKFDNGSAFNLSAEFLR 318

Query: 203 VYSPAADSKIRSVGGEKVIFGRRHVGIMSAEVVGNYGIRIVFDDLHKTGIYTYSYFYHLG 382
           ++SPAADSK+RS+GGEKVIFGRRHVGIMSAE VGNYG+RI+FDDLHKTGIYT+ YFYHLG
Sbjct: 319 IHSPAADSKVRSIGGEKVIFGRRHVGIMSAEPVGNYGVRILFDDLHKTGIYTWDYFYHLG 378

Query: 383 SNKF 394
           SNKF
Sbjct: 379 SNKF 382


>ref|NP_001145103.1| uncharacterized protein LOC100278318 [Zea mays]
           gi|195651255|gb|ACG45095.1| hypothetical protein [Zea
           mays]
          Length = 138

 Score =  179 bits (455), Expect = 2e-43
 Identities = 88/115 (76%), Positives = 99/115 (86%), Gaps = 1/115 (0%)
 Frame = +2

Query: 53  MMHALQRTLRSIHSTV-QPPKLTKLSLHPPKCVEMEFADGSLFNLSAEFLRVYSPAADSK 229
           M  AL   LR +H+   QPP+LTK +LHPPK VE+EFADGS F+LSAEFLRVYSPA DSK
Sbjct: 1   MAAALGAVLRRLHTAAAQPPRLTKFALHPPKFVEIEFADGSSFHLSAEFLRVYSPAVDSK 60

Query: 230 IRSVGGEKVIFGRRHVGIMSAEVVGNYGIRIVFDDLHKTGIYTYSYFYHLGSNKF 394
           IRSVGGEKVIFGRRHVGIMSAE VGNYG+RI+FDDLHKTGI+T+ Y +HLGSNKF
Sbjct: 61  IRSVGGEKVIFGRRHVGIMSAESVGNYGVRILFDDLHKTGIFTWDYLHHLGSNKF 115


>ref|XP_002456801.1| hypothetical protein SORBIDRAFT_03g043050 [Sorghum bicolor]
           gi|241928776|gb|EES01921.1| hypothetical protein
           SORBIDRAFT_03g043050 [Sorghum bicolor]
          Length = 138

 Score =  179 bits (453), Expect = 3e-43
 Identities = 87/115 (75%), Positives = 100/115 (86%), Gaps = 1/115 (0%)
 Frame = +2

Query: 53  MMHALQRTLRSIHSTV-QPPKLTKLSLHPPKCVEMEFADGSLFNLSAEFLRVYSPAADSK 229
           M  AL   +R +H+   QPP+LTK +LHPPK VE+EFADGS F+LSAEFLRVYSPAADSK
Sbjct: 1   MAAALGAVVRRLHTAAAQPPRLTKFALHPPKSVEIEFADGSSFHLSAEFLRVYSPAADSK 60

Query: 230 IRSVGGEKVIFGRRHVGIMSAEVVGNYGIRIVFDDLHKTGIYTYSYFYHLGSNKF 394
           IRSVGGEKVIFGR+HVGIMSAE VGNYG+RI+FDDLHKTGI+T+ Y +HLGSNKF
Sbjct: 61  IRSVGGEKVIFGRQHVGIMSAESVGNYGVRILFDDLHKTGIFTWDYLHHLGSNKF 115


>ref|XP_004145682.1| PREDICTED: uncharacterized protein LOC101219823 [Cucumis sativus]
          Length = 136

 Score =  176 bits (445), Expect = 2e-42
 Identities = 82/113 (72%), Positives = 99/113 (87%)
 Frame = +2

Query: 56  MHALQRTLRSIHSTVQPPKLTKLSLHPPKCVEMEFADGSLFNLSAEFLRVYSPAADSKIR 235
           M  L R  R+IH+T+  P++T  +LH PK VE++FADGS+FNLSAEFLRVYSPAAD+KIR
Sbjct: 1   MLPLHRLFRTIHTTLDAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIR 60

Query: 236 SVGGEKVIFGRRHVGIMSAEVVGNYGIRIVFDDLHKTGIYTYSYFYHLGSNKF 394
           S+GGEKVI GRRHVGIMSAE VGNYG+RI+FDDLH+TGIY++ YF+HLGSNKF
Sbjct: 61  SIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKF 113


Top