BLASTX nr result

ID: Coptis25_contig00029884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029884
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76938.1| hypothetical protein VITISV_025425 [Vitis vinifera]   128   4e-28
emb|CAN72445.1| hypothetical protein VITISV_026551 [Vitis vinifera]    99   3e-19
gb|EEE55062.1| hypothetical protein OsJ_02776 [Oryza sativa Japo...    97   1e-18
emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]    91   7e-18
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]    90   9e-18

>emb|CAN76938.1| hypothetical protein VITISV_025425 [Vitis vinifera]
          Length = 446

 Score =  128 bits (322), Expect = 4e-28
 Identities = 66/130 (50%), Positives = 89/130 (68%), Gaps = 2/130 (1%)
 Frame = +1

Query: 1   QLLAKVGHLTQERQVSCFVSGLRPSIRTDVQAARPNSLSTAIGLARVYEARDSSQQRPVP 180
           +LL++VG L Q +QV+CF+ GL   +R DVQA +P +LS A+GLAR+YE +    +R   
Sbjct: 257 KLLSRVGKLNQSQQVACFIGGLNEDVRIDVQAMKPPTLSAAVGLARLYEVK--YHKRSSF 314

Query: 181 TGESKRNFLSNKDTASS--SASIPVRRLSQAELQERRTKGLCYNCNEKFVLGHRCKKLFV 354
             E K+   +N    S   S++  +RRLS  E++ERR KGLC+NC+EKF  GHRCKKLF+
Sbjct: 315 NLEPKKTVSTNSTVTSRPLSSTPAIRRLSPTEMKERRDKGLCFNCDEKFAPGHRCKKLFL 374

Query: 355 IEGC*DEEDS 384
           IEGC  EEDS
Sbjct: 375 IEGCWPEEDS 384


>emb|CAN72445.1| hypothetical protein VITISV_026551 [Vitis vinifera]
          Length = 721

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 55/144 (38%), Positives = 84/144 (58%), Gaps = 10/144 (6%)
 Frame = +1

Query: 1   QLLAKVGHLTQERQVSCFVSGLRPSIRTDVQAARPNSLSTAIGLARVYEARDSSQQRPV- 177
           +LLA+   L  +++  C +S L+  +R DV+   P +LS AIGLAR YE +    +RP  
Sbjct: 143 RLLARADTLIDKQEAECLISRLKDGLRXDVRVQNPQNLSVAIGLARTYELKAQEVRRPTN 202

Query: 178 PTGESKRNFLSNKDTASSSAS---------IPVRRLSQAELQERRTKGLCYNCNEKFVLG 330
           PT  S  +  +N+   S+ +          +P+ +LS  +LQ RR +GLCYNC+EK+ +G
Sbjct: 203 PTFSSSVHNSNNQWNTSTPSGAKDTNLERILPIHKLSPTKLQRRRQQGLCYNCDEKYXMG 262

Query: 331 HRCKKLFVIEGC*DEEDSDIIMNE 402
           H+ KKLF IE   +EE+ + I  E
Sbjct: 263 HKXKKLFFIE--LEEENEEAIEEE 284


>gb|EEE55062.1| hypothetical protein OsJ_02776 [Oryza sativa Japonica Group]
          Length = 692

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 66/159 (41%), Positives = 85/159 (53%), Gaps = 26/159 (16%)
 Frame = +1

Query: 25  LTQERQVSCFVSGLRPSIRTDVQAARPNSLSTAIGLARVYEAR------DSSQQRPVPTG 186
           L++ +QV  F +GL   ++TDV   RP SL  AI LAR YE R      D S  R   TG
Sbjct: 335 LSESQQVQLFTAGLVNPLKTDVALCRPRSLDDAIMLARAYEQRATLGPTDPSAPR---TG 391

Query: 187 ESKRNFLSNKDTASSSAS--------------------IPVRRLSQAELQERRTKGLCYN 306
              R  L     AS+SAS                    +P +RLS AE+ +RR++GLCYN
Sbjct: 392 RVPRPSLPASSAASASASTTSADVAASTAAGKQPLVSALPRKRLSPAEMAQRRSEGLCYN 451

Query: 307 CNEKFVLGHRCKKLFVIEGC*DEEDSDIIMNEDDTIHEA 423
           C+EK+V GHRCKK FVIE     ED+    +E+D+  EA
Sbjct: 452 CDEKYVAGHRCKKSFVIEVISFPEDTG---DEEDSTPEA 487


>emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]
          Length = 1366

 Score = 90.5 bits (223), Expect(2) = 7e-18
 Identities = 48/129 (37%), Positives = 78/129 (60%), Gaps = 3/129 (2%)
 Frame = +1

Query: 25  LTQERQVSCFVSGLRPSIRTDVQAARPNSLSTAIGLARVYEARDSSQQRPVPTGE-SKRN 201
           L +  ++SCF+SGLR  IR  V+   P++L  A GLA++ E   ++ +R    G    R 
Sbjct: 166 LAESYKLSCFLSGLREDIRFMVRMLNPSNLHIAFGLAKMQEENXAALRRTAKLGSVPTRL 225

Query: 202 FLSNKDTASSSASIPVRRLSQAELQERRTKGLCYNCNEKFVLGHRCK--KLFVIEGC*DE 375
            +         A +PV+RLS ++++ERR KGLCYNC++K+  GH+CK  +LF++E C + 
Sbjct: 226 AIGPPSPPEKRAIVPVQRLSPSQMKERRDKGLCYNCDDKWAPGHKCKSXRLFIME-CDES 284

Query: 376 EDSDIIMNE 402
            D ++  +E
Sbjct: 285 SDDEVPKSE 293



 Score = 24.6 bits (52), Expect(2) = 7e-18
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3

Query: 435 P*ISLHAISSSWAPETMRIKGGI 503
           P IS+HA+  S  P+TMR  G I
Sbjct: 313 PGISIHALVGSPNPKTMRFLGHI 335


>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score = 90.1 bits (222), Expect(2) = 9e-18
 Identities = 48/129 (37%), Positives = 79/129 (61%), Gaps = 3/129 (2%)
 Frame = +1

Query: 25  LTQERQVSCFVSGLRPSIRTDVQAARPNSLSTAIGLARVYEARDSSQQRPVPTGE-SKRN 201
           L +  ++SCF+SGLR +IR  V+   P++L  A GLA++ E   ++ +R    G    R 
Sbjct: 199 LAESYKLSCFLSGLRENIRFMVRMLNPSNLHIAFGLAKMQEENVAALRRTAKLGSVPTRL 258

Query: 202 FLSNKDTASSSASIPVRRLSQAELQERRTKGLCYNCNEKFVLGHRCK--KLFVIEGC*DE 375
            +         A +PV+RLS ++++ERR KGLCYNC++K+  GH+CK  +LF++E C + 
Sbjct: 259 AIGPPSPPEKRAIVPVQRLSPSQMKERRDKGLCYNCDDKWAPGHKCKSARLFIME-CDES 317

Query: 376 EDSDIIMNE 402
            D ++  +E
Sbjct: 318 SDDEVPKSE 326



 Score = 24.6 bits (52), Expect(2) = 9e-18
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3

Query: 435 P*ISLHAISSSWAPETMRIKGGI 503
           P IS+HA+  S  P+TMR  G I
Sbjct: 346 PGISIHALVGSPNPKTMRFLGHI 368


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