BLASTX nr result

ID: Coptis25_contig00029883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029883
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279793.1| PREDICTED: uncharacterized protein At2g39920...    77   2e-12
ref|XP_002315179.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09

>ref|XP_002279793.1| PREDICTED: uncharacterized protein At2g39920 [Vitis vinifera]
           gi|296086101|emb|CBI31542.3| unnamed protein product
           [Vitis vinifera]
          Length = 308

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 35/65 (53%), Positives = 48/65 (73%)
 Frame = -1

Query: 365 RPDDETLDESWKYLSRRRAELQDFGYRITSVISSNMAALTGPCLGKRVFKLPSPLLYKLE 186
           R DDE   ++ +Y SR+R  +Q  G+RIT+VIS +M ALTGP LGKR+FKLP+P+ YK +
Sbjct: 239 RSDDEMQMDTHEYFSRQRGVIQKEGFRITAVISGHMDALTGPSLGKRIFKLPNPMYYKFD 298

Query: 185 HHVNS 171
            H+ S
Sbjct: 299 DHIES 303


>ref|XP_002315179.1| predicted protein [Populus trichocarpa] gi|222864219|gb|EEF01350.1|
           predicted protein [Populus trichocarpa]
          Length = 285

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 33/65 (50%), Positives = 42/65 (64%)
 Frame = -1

Query: 365 RPDDETLDESWKYLSRRRAELQDFGYRITSVISSNMAALTGPCLGKRVFKLPSPLLYKLE 186
           R D+E   +S +Y SRR   +Q  G+RI+ VISS M ALT   LG RVFKLP+P+ Y  E
Sbjct: 216 RSDNEIEIDSREYFSRRMVAMQKAGFRISGVISSQMDALTSASLGHRVFKLPNPVYYNFE 275

Query: 185 HHVNS 171
           HH  +
Sbjct: 276 HHTGN 280


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