BLASTX nr result

ID: Coptis25_contig00029873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029873
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533623.1| conserved hypothetical protein [Ricinus comm...   114   8e-24
emb|CBI37224.3| unnamed protein product [Vitis vinifera]              111   7e-23
ref|XP_002268191.1| PREDICTED: uncharacterized protein LOC100246...   111   7e-23
ref|XP_002301834.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23
emb|CAN83208.1| hypothetical protein VITISV_009141 [Vitis vinifera]   111   7e-23

>ref|XP_002533623.1| conserved hypothetical protein [Ricinus communis]
           gi|223526481|gb|EEF28752.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 892

 Score =  114 bits (285), Expect = 8e-24
 Identities = 53/64 (82%), Positives = 58/64 (90%)
 Frame = +1

Query: 22  GEVTAEVKLGNYRGITKKSGSSSPEWDQVFAFSKDCIQSSVVEIFVKENNKDDFLGRVWY 201
           GE+  EVKLGNYRGITKK GSS+ EW QVFAFSKDCIQSS+VEIFVKE NKDDFLGRVW+
Sbjct: 170 GEIVVEVKLGNYRGITKKVGSSNMEWGQVFAFSKDCIQSSMVEIFVKEGNKDDFLGRVWF 229

Query: 202 DLSE 213
           DL+E
Sbjct: 230 DLNE 233


>emb|CBI37224.3| unnamed protein product [Vitis vinifera]
          Length = 868

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/72 (73%), Positives = 62/72 (86%), Gaps = 2/72 (2%)
 Frame = +1

Query: 4   RDISTMG--EVTAEVKLGNYRGITKKSGSSSPEWDQVFAFSKDCIQSSVVEIFVKENNKD 177
           RD+S  G  EV AEVKLGNYRGITK+  +++PEW QVFAFSKDCIQSSV EIFVKE +KD
Sbjct: 265 RDVSASGGGEVMAEVKLGNYRGITKRVSANNPEWGQVFAFSKDCIQSSVAEIFVKEKDKD 324

Query: 178 DFLGRVWYDLSE 213
           +FLGRVW+DL+E
Sbjct: 325 EFLGRVWFDLNE 336


>ref|XP_002268191.1| PREDICTED: uncharacterized protein LOC100246307 [Vitis vinifera]
          Length = 1012

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/72 (73%), Positives = 62/72 (86%), Gaps = 2/72 (2%)
 Frame = +1

Query: 4   RDISTMG--EVTAEVKLGNYRGITKKSGSSSPEWDQVFAFSKDCIQSSVVEIFVKENNKD 177
           RD+S  G  EV AEVKLGNYRGITK+  +++PEW QVFAFSKDCIQSSV EIFVKE +KD
Sbjct: 283 RDVSASGGGEVMAEVKLGNYRGITKRVSANNPEWGQVFAFSKDCIQSSVAEIFVKEKDKD 342

Query: 178 DFLGRVWYDLSE 213
           +FLGRVW+DL+E
Sbjct: 343 EFLGRVWFDLNE 354


>ref|XP_002301834.1| predicted protein [Populus trichocarpa] gi|222843560|gb|EEE81107.1|
           predicted protein [Populus trichocarpa]
          Length = 1023

 Score =  111 bits (277), Expect = 7e-23
 Identities = 52/65 (80%), Positives = 60/65 (92%), Gaps = 1/65 (1%)
 Frame = +1

Query: 22  GEVTAEVKLGNYRGITKKS-GSSSPEWDQVFAFSKDCIQSSVVEIFVKENNKDDFLGRVW 198
           GEV AEVKLGNYRG+TKK  GSS+ EWDQVFAFSKDCIQSS+VE+FVK+ NKDD+LGRVW
Sbjct: 301 GEVVAEVKLGNYRGVTKKVIGSSNVEWDQVFAFSKDCIQSSMVEVFVKQGNKDDYLGRVW 360

Query: 199 YDLSE 213
           +DL+E
Sbjct: 361 FDLNE 365


>emb|CAN83208.1| hypothetical protein VITISV_009141 [Vitis vinifera]
          Length = 1012

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/72 (73%), Positives = 62/72 (86%), Gaps = 2/72 (2%)
 Frame = +1

Query: 4   RDISTMG--EVTAEVKLGNYRGITKKSGSSSPEWDQVFAFSKDCIQSSVVEIFVKENNKD 177
           RD+S  G  EV AEVKLGNYRGITK+  +++PEW QVFAFSKDCIQSSV EIFVKE +KD
Sbjct: 283 RDVSASGGGEVMAEVKLGNYRGITKRVSANNPEWGQVFAFSKDCIQSSVAEIFVKEKDKD 342

Query: 178 DFLGRVWYDLSE 213
           +FLGRVW+DL+E
Sbjct: 343 EFLGRVWFDLNE 354


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