BLASTX nr result

ID: Coptis25_contig00029860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029860
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271039.1| PREDICTED: uncharacterized protein LOC100262...    68   7e-10
gb|AFK49088.1| unknown [Lotus japonicus]                               60   2e-07
gb|AFK41456.1| unknown [Lotus japonicus]                               60   2e-07
ref|NP_001236174.1| uncharacterized protein LOC100306260 [Glycin...    57   1e-06
ref|XP_003542180.1| PREDICTED: uncharacterized protein LOC100797...    56   3e-06

>ref|XP_002271039.1| PREDICTED: uncharacterized protein LOC100262060 [Vitis vinifera]
           gi|296085176|emb|CBI28671.3| unnamed protein product
           [Vitis vinifera]
          Length = 156

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/62 (54%), Positives = 43/62 (69%)
 Frame = -3

Query: 423 RKVYDVDQRARQQQQIVAPSGRAPKAVDEDLYKIPPELLYSYPKKKRTFGFFLSCLVPSC 244
           RK     QR++QQ      + R PKAVDEDLYKIPP+LL+S  K+K+ +G F SCLVP+C
Sbjct: 96  RKQASAKQRSKQQPPAPTKAARPPKAVDEDLYKIPPDLLHS-SKRKKMWGIFPSCLVPTC 154

Query: 243 AA 238
            A
Sbjct: 155 MA 156


>gb|AFK49088.1| unknown [Lotus japonicus]
          Length = 145

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/52 (59%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
 Frame = -3

Query: 390 QQQQIVAPSGR-APKAVDEDLYKIPPELLYSYPKKKRTFGFFLSCLVPSCAA 238
           ++ Q   P  R  PK VDEDLYKI PELLY    KKR F FFLSCL+P+C A
Sbjct: 94  KEPQNTGPISRPTPKPVDEDLYKISPELLYVKSTKKRGFCFFLSCLLPTCIA 145


>gb|AFK41456.1| unknown [Lotus japonicus]
          Length = 145

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/52 (59%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
 Frame = -3

Query: 390 QQQQIVAPSGR-APKAVDEDLYKIPPELLYSYPKKKRTFGFFLSCLVPSCAA 238
           ++ Q   P  R  PK VDEDLYKI PELLY    KKR F FFLSCL+P+C A
Sbjct: 94  KEPQNTGPISRPTPKPVDEDLYKISPELLYVKSTKKRGFCFFLSCLLPTCIA 145


>ref|NP_001236174.1| uncharacterized protein LOC100306260 [Glycine max]
           gi|255628031|gb|ACU14360.1| unknown [Glycine max]
          Length = 146

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/39 (66%), Positives = 30/39 (76%)
 Frame = -3

Query: 354 PKAVDEDLYKIPPELLYSYPKKKRTFGFFLSCLVPSCAA 238
           PK VDEDLYKI PELLY+  +KKR   FF SCL+P+C A
Sbjct: 108 PKPVDEDLYKISPELLYAKTRKKRGLCFFPSCLIPTCIA 146


>ref|XP_003542180.1| PREDICTED: uncharacterized protein LOC100797475 [Glycine max]
          Length = 146

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/39 (66%), Positives = 30/39 (76%)
 Frame = -3

Query: 354 PKAVDEDLYKIPPELLYSYPKKKRTFGFFLSCLVPSCAA 238
           PK VDEDLYKI PELLY+  +KKR   FF SCL+P+C A
Sbjct: 108 PKPVDEDLYKISPELLYAKNRKKRGLCFFPSCLMPTCIA 146


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