BLASTX nr result

ID: Coptis25_contig00029857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029857
         (579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274169.1| PREDICTED: uncharacterized protein LOC100256...   198   6e-49
emb|CAN65659.1| hypothetical protein VITISV_000953 [Vitis vinifera]   191   6e-47
ref|XP_003630503.1| Kinesin-like protein [Medicago truncatula] g...   172   4e-41
ref|XP_003532413.1| PREDICTED: kinesin-4-like [Glycine max]           165   6e-39
emb|CBI34668.3| unnamed protein product [Vitis vinifera]              163   2e-38

>ref|XP_002274169.1| PREDICTED: uncharacterized protein LOC100256435 [Vitis vinifera]
          Length = 1101

 Score =  198 bits (503), Expect = 6e-49
 Identities = 120/200 (60%), Positives = 138/200 (69%), Gaps = 8/200 (4%)
 Frame = +3

Query: 3    KRNTSSLRHGSLSPIKHSVGGTSQXXXXXXXXXXXXXTEKTASDLDNCSEHSDKHSEAGS 182
            KR  +SLR+GS SP +HS+G + Q              +K ASDLDNCSE+SDKHSEAGS
Sbjct: 901  KRGMNSLRYGSSSPRRHSIGASRQSHRLPQGKGSGL-VQKAASDLDNCSEYSDKHSEAGS 959

Query: 183  HQSMDDFRHHKDFFRQSKLAVMDGNHNLTGDDELLGFGDADSEERLSDISDGSLSMGTET 362
              S+DDFRH K+ F QSKLA  D   N T D ELLGFGDADSEERLSDISDG LSMGTET
Sbjct: 960  LPSIDDFRH-KECFAQSKLAGGDVGQNFTEDIELLGFGDADSEERLSDISDGGLSMGTET 1018

Query: 363  DGSISSVVEFTLFPEGSKPAETPEKSK---APSKIPRPPLKQG---QTPVPRSSKD-SKG 521
            DGSISS+VEFTLFPE  KPAE  EK +    PSK+PR P KQG    + +P SSK  SK 
Sbjct: 1019 DGSISSIVEFTLFPEAVKPAENTEKIEKLTMPSKLPRIPQKQGPLRSSRLPSSSKSASKV 1078

Query: 522  STSVRKT-ITGNSSSAKSSK 578
            ++S RKT    +SSS K +K
Sbjct: 1079 ASSSRKTPAVASSSSTKLTK 1098


>emb|CAN65659.1| hypothetical protein VITISV_000953 [Vitis vinifera]
          Length = 1742

 Score =  191 bits (486), Expect = 6e-47
 Identities = 109/180 (60%), Positives = 123/180 (68%), Gaps = 3/180 (1%)
 Frame = +3

Query: 3    KRNTSSLRHGSLSPIKHSVGGTSQXXXXXXXXXXXXXTEKTASDLDNCSEHSDKHSEAGS 182
            KR  +SLR+GS SP +HS+G + Q              +K ASDLDNCSE+SDKHSEAGS
Sbjct: 833  KRGMNSLRYGSSSPRRHSIGASRQSHRLPQGKGSGL-VQKAASDLDNCSEYSDKHSEAGS 891

Query: 183  HQSMDDFRHHKDFFRQSKLAVMDGNHNLTGDDELLGFGDADSEERLSDISDGSLSMGTET 362
              S+DDFRH K+ F QSKLA  D   N T D ELLGFGDADSEERLSDISDG LSMGTET
Sbjct: 892  LPSIDDFRH-KECFAQSKLAGGDVGQNFTEDIELLGFGDADSEERLSDISDGGLSMGTET 950

Query: 363  DGSISSVVEFTLFPEGSKPAETPEKSK---APSKIPRPPLKQGQTPVPRSSKDSKGSTSV 533
            DGSISS+VEFTLFPE  KPAE  EK +    PSK+PR P KQG     R    SK ++ V
Sbjct: 951  DGSISSIVEFTLFPEAVKPAENTEKIEKLTMPSKLPRIPQKQGPLRSSRLPSSSKSASKV 1010


>ref|XP_003630503.1| Kinesin-like protein [Medicago truncatula]
            gi|355524525|gb|AET04979.1| Kinesin-like protein
            [Medicago truncatula]
          Length = 806

 Score =  172 bits (436), Expect = 4e-41
 Identities = 113/207 (54%), Positives = 128/207 (61%), Gaps = 20/207 (9%)
 Frame = +3

Query: 18   SLRHGSLSPIKHSVGGTSQXXXXXXXXXXXXXTEKTASDLDNCSEHSDKHSEAGSHQSMD 197
            SLRH S SP +HSVG T +              EK A D DN SE+SDKHSEAGSHQS+D
Sbjct: 599  SLRHASSSPRRHSVG-TPRKSTRLTGARSLGVNEKAAFDTDNGSEYSDKHSEAGSHQSLD 657

Query: 198  DFRHHKDFFRQSKLAVMDGNHNLTGDDELLGFGDADSEERLSDISDGSLSMGTETDGSIS 377
            DFR+ K  F Q KL   D + N   D ELL FGDADSEERLSDISDG LSMGTETDGSIS
Sbjct: 658  DFRN-KSSFLQLKLPREDVDQNFNDDIELLRFGDADSEERLSDISDGGLSMGTETDGSIS 716

Query: 378  SVVEFTLFPEGSKPAE-TP--------------EKSKAPSKIPRPPLKQG--QTPVPRSS 506
            S+VE+TLFP+  K AE TP              EK   PS+IP+ P  Q   QT   R S
Sbjct: 717  SIVEYTLFPDPEKTAESTPVKDMTFDSLHAQSMEKPIMPSRIPKAPQVQPKLQTRTSRLS 776

Query: 507  ---KDSKGSTSVRKTITGNSSSAKSSK 578
                 SK S+SV+KT  G+SSSA+ SK
Sbjct: 777  LNRSTSKVSSSVKKTPAGSSSSARPSK 803


>ref|XP_003532413.1| PREDICTED: kinesin-4-like [Glycine max]
          Length = 1069

 Score =  165 bits (417), Expect = 6e-39
 Identities = 104/207 (50%), Positives = 123/207 (59%), Gaps = 20/207 (9%)
 Frame = +3

Query: 18   SLRHGSLSPIKHSVGGTSQXXXXXXXXXXXXXTEKTASDLDNCSEHSDKHSEAGSHQSMD 197
            S RHGS SP +HS+G T +               K AS++DNCSE+SDKHSEAGSHQSMD
Sbjct: 862  SARHGSSSPRRHSIG-TPRNSMRLAGARSFGVNGKAASEMDNCSEYSDKHSEAGSHQSMD 920

Query: 198  DFRHHKDFFRQSKLAVMDGNHNLTGDDELLGFGDADSEERLSDISDGSLSMGTETDGSIS 377
            DFR+     R  KL   D + N+  D +LL FGDADSEERLSDISDG LSMGTET+GSIS
Sbjct: 921  DFRNKSSSLRL-KLTRDDSSQNVNEDIDLLRFGDADSEERLSDISDGGLSMGTETEGSIS 979

Query: 378  SVVEFTLFPEGSK---------------PAETPEKSKAPSKIPRP---PLKQGQTP--VP 497
            S+VE+TLFPE  K               PAE+ EK   PSKIP+    P K    P  + 
Sbjct: 980  SIVEYTLFPELEKAAEITPVKDTTTDNLPAESTEKLIMPSKIPKAAQVPQKVQSRPSRLS 1039

Query: 498  RSSKDSKGSTSVRKTITGNSSSAKSSK 578
             +   SK  +SVRK    +SSS K  K
Sbjct: 1040 LNKTSSKVLSSVRKPAASSSSSVKPPK 1066


>emb|CBI34668.3| unnamed protein product [Vitis vinifera]
          Length = 1071

 Score =  163 bits (413), Expect = 2e-38
 Identities = 105/200 (52%), Positives = 121/200 (60%), Gaps = 8/200 (4%)
 Frame = +3

Query: 3    KRNTSSLRHGSLSPIKHSVGGTSQXXXXXXXXXXXXXTEKTASDLDNCSEHSDKHSEAGS 182
            KR  +SLR+GS SP +HS+G + Q              +K ASDLDNCSE+SDKHSEAG 
Sbjct: 896  KRGMNSLRYGSSSPRRHSIGASRQSHRLPQGKGSGL-VQKAASDLDNCSEYSDKHSEAGQ 954

Query: 183  HQSMDDFRHHKDFFRQSKLAVMDGNHNLTGDDELLGFGDADSEERLSDISDGSLSMGTET 362
                                      N T D ELLGFGDADSEERLSDISDG LSMGTET
Sbjct: 955  --------------------------NFTEDIELLGFGDADSEERLSDISDGGLSMGTET 988

Query: 363  DGSISSVVEFTLFPEGSKPAETPEKSK---APSKIPRPPLKQG---QTPVPRSSKD-SKG 521
            DGSISS+VEFTLFPE  KPAE  EK +    PSK+PR P KQG    + +P SSK  SK 
Sbjct: 989  DGSISSIVEFTLFPEAVKPAENTEKIEKLTMPSKLPRIPQKQGPLRSSRLPSSSKSASKV 1048

Query: 522  STSVRKT-ITGNSSSAKSSK 578
            ++S RKT    +SSS K +K
Sbjct: 1049 ASSSRKTPAVASSSSTKLTK 1068


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