BLASTX nr result

ID: Coptis25_contig00029848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029848
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002458072.1| hypothetical protein SORBIDRAFT_03g026480 [S...   110   9e-23
tpg|DAA58746.1| TPA: hypothetical protein ZEAMMB73_747934 [Zea m...   109   2e-22
gb|EAY74746.1| hypothetical protein OsI_02638 [Oryza sativa Indi...   108   3e-22
gb|EAZ12519.1| hypothetical protein OsJ_02416 [Oryza sativa Japo...   108   3e-22
ref|XP_002302563.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17

>ref|XP_002458072.1| hypothetical protein SORBIDRAFT_03g026480 [Sorghum bicolor]
           gi|241930047|gb|EES03192.1| hypothetical protein
           SORBIDRAFT_03g026480 [Sorghum bicolor]
          Length = 579

 Score =  110 bits (276), Expect = 9e-23
 Identities = 51/104 (49%), Positives = 73/104 (70%)
 Frame = -1

Query: 313 TTVLTVCATFTMLEFGVQIHGLLRKCGIVHSNIYTDNSLINMYAKCGSIEEMQRLFTDMP 134
           TTVL  C+   +L FG Q+H    K G   SN +  NSLI+MY+ CG+  +++++F +M 
Sbjct: 343 TTVLHTCSVLALLAFGRQVHARTIKDGFGRSNTFVSNSLISMYSSCGATLDLEQVFEEMT 402

Query: 133 KRDIVSWNSVILGLGQNGYTRKALDVAEQVLKLGVHNGSTFVAL 2
            RD+VSWNSVI GLGQNG  R+AL   E+ L+LG++NG+TF+A+
Sbjct: 403 VRDVVSWNSVIQGLGQNGLGRQALAAGERALELGMYNGNTFIAI 446


>tpg|DAA58746.1| TPA: hypothetical protein ZEAMMB73_747934 [Zea mays]
          Length = 536

 Score =  109 bits (273), Expect = 2e-22
 Identities = 49/104 (47%), Positives = 73/104 (70%)
 Frame = -1

Query: 313 TTVLTVCATFTMLEFGVQIHGLLRKCGIVHSNIYTDNSLINMYAKCGSIEEMQRLFTDMP 134
           TTVL +C+   +L FG Q+H    K G   SN++  NSLI+MY+ CG+  +++++  +M 
Sbjct: 299 TTVLHICSVLALLAFGRQVHARAVKDGFGRSNVFVSNSLISMYSSCGATLDLEQVLEEMA 358

Query: 133 KRDIVSWNSVILGLGQNGYTRKALDVAEQVLKLGVHNGSTFVAL 2
            RD+VSWNS I GLGQNG  R+AL   E+ L+LG++NG+TF+A+
Sbjct: 359 VRDVVSWNSAIQGLGQNGLGRQALAAGERALELGMYNGNTFIAI 402


>gb|EAY74746.1| hypothetical protein OsI_02638 [Oryza sativa Indica Group]
          Length = 536

 Score =  108 bits (271), Expect = 3e-22
 Identities = 50/104 (48%), Positives = 74/104 (71%)
 Frame = -1

Query: 313 TTVLTVCATFTMLEFGVQIHGLLRKCGIVHSNIYTDNSLINMYAKCGSIEEMQRLFTDMP 134
           TTVL +C+  ++L  G Q+H    K G+  S+++  NSL+NMY+  GS  +++++F +M 
Sbjct: 300 TTVLHICSVLSLLTLGRQVHARAVKSGLSRSHVFVGNSLMNMYSCSGSTADLEKVFDEMA 359

Query: 133 KRDIVSWNSVILGLGQNGYTRKALDVAEQVLKLGVHNGSTFVAL 2
            RD+VSWN+ I GLGQNG  R+AL  AE+ L LG++NGSTFVA+
Sbjct: 360 ARDVVSWNTAIQGLGQNGRGRRALAFAERALALGLYNGSTFVAI 403


>gb|EAZ12519.1| hypothetical protein OsJ_02416 [Oryza sativa Japonica Group]
          Length = 539

 Score =  108 bits (271), Expect = 3e-22
 Identities = 50/104 (48%), Positives = 74/104 (71%)
 Frame = -1

Query: 313 TTVLTVCATFTMLEFGVQIHGLLRKCGIVHSNIYTDNSLINMYAKCGSIEEMQRLFTDMP 134
           TTVL +C+  ++L  G Q+H    K G+  S+++  NSL+NMY+  GS  +++++F +M 
Sbjct: 300 TTVLHICSVLSLLTLGRQVHARAVKSGLSRSHVFVGNSLMNMYSCSGSTADLEKVFDEMA 359

Query: 133 KRDIVSWNSVILGLGQNGYTRKALDVAEQVLKLGVHNGSTFVAL 2
            RD+VSWN+ I GLGQNG  R+AL  AE+ L LG++NGSTFVA+
Sbjct: 360 ARDVVSWNTAIQGLGQNGRGRRALAFAERALALGLYNGSTFVAI 403


>ref|XP_002302563.1| predicted protein [Populus trichocarpa] gi|222844289|gb|EEE81836.1|
           predicted protein [Populus trichocarpa]
          Length = 514

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/104 (43%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
 Frame = -1

Query: 310 TVLTVCATFTMLEFGVQIHGLLRKCGIVHSNIYTDNSLINMYAKCGSIEEMQRLFTDMPK 131
           +VL+ CA  T+++FG QIH  L K G+  S++  DNSL+ MYAKCGSI +  R F +MP 
Sbjct: 147 SVLSACAELTVMDFGQQIHATLVKSGL-ESSLSVDNSLVTMYAKCGSIVDANRAFDNMPT 205

Query: 130 RDIVSWNSVILGLGQNGYTRKALDVAEQVLKLGVH-NGSTFVAL 2
           RD++SW ++I+G  QNG  + +L   +Q++  G   +  TF+ L
Sbjct: 206 RDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGL 249


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