BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029841
         (1211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001151885.1| LOC100285522 [Zea mays] gi|195650579|gb|ACG4...    70   1e-09
gb|ACF84400.1| unknown [Zea mays] gi|413933776|gb|AFW68327.1| F-...    70   1e-09
gb|AFW81196.1| hypothetical protein ZEAMMB73_238623 [Zea mays]         70   1e-09
ref|XP_002464344.1| hypothetical protein SORBIDRAFT_01g016660 [S...    68   4e-09
ref|XP_003562356.1| PREDICTED: putative F-box protein At4g05475-...    67   7e-09

>ref|NP_001151885.1| LOC100285522 [Zea mays] gi|195650579|gb|ACG44757.1| F-box domain
           containing protein [Zea mays]
          Length = 294

 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 52/157 (33%), Positives = 82/157 (52%), Gaps = 5/157 (3%)
 Frame = +1

Query: 427 KSIGNLQVLESMEVDEVFISDDSTLKQVSECCPNFIKLKV-CNSVCKNTALLIATFLPKL 603
           K+IG LQ L+ M VDE  I+ D  L  V +CCP+F++LKV    V +  A +I   LP+L
Sbjct: 140 KAIGGLQSLKGMAVDESLINYD-VLLHVHQCCPDFVELKVSALYVDEEMASVICNSLPRL 198

Query: 604 KILDISSTNIHRKDLLVILKGCVELQSLDITNCGKIHSDDEILKIGCRRLEVFKWDNAYS 783
           K L+I S ++    ++  L    +L+ LDI+          +L+    RL+VF W++ + 
Sbjct: 199 KKLEIPSCDMSSAAIIRFLDCLEQLEHLDISGYETSAISSPVLE-KASRLKVFLWNSKFE 257

Query: 784 ----DYCSECEEENEDMSYQWPCAHVMDEGFSTYIEG 882
                 CS C E N  ++ Q PC  +M+     ++ G
Sbjct: 258 LGEFMDCSNCGEHN--INPQEPCKCMMEHKVMDWLAG 292


>gb|ACF84400.1| unknown [Zea mays] gi|413933776|gb|AFW68327.1| F-box domain
           containing protein [Zea mays]
          Length = 294

 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 52/157 (33%), Positives = 82/157 (52%), Gaps = 5/157 (3%)
 Frame = +1

Query: 427 KSIGNLQVLESMEVDEVFISDDSTLKQVSECCPNFIKLKV-CNSVCKNTALLIATFLPKL 603
           K+IG LQ L+ M VDE  I+ D  L  V +CCP+F++LKV    V +  A +I   LP+L
Sbjct: 140 KAIGGLQSLKGMAVDESLINYD-VLLHVHQCCPDFVELKVSALYVDEEMASVICNSLPRL 198

Query: 604 KILDISSTNIHRKDLLVILKGCVELQSLDITNCGKIHSDDEILKIGCRRLEVFKWDNAYS 783
           K L+I S ++    ++  L    +L+ LDI+          +L+    RL+VF W++ + 
Sbjct: 199 KKLEIPSCDMSSAAIIRFLDCLEQLEHLDISGYETSAISSPVLE-KASRLKVFLWNSKFE 257

Query: 784 ----DYCSECEEENEDMSYQWPCAHVMDEGFSTYIEG 882
                 CS C E N  ++ Q PC  +M+     ++ G
Sbjct: 258 LGEFMDCSNCGEHN--INPQEPCKCMMEHKVMDWLAG 292


>gb|AFW81196.1| hypothetical protein ZEAMMB73_238623 [Zea mays]
          Length = 236

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 5/161 (3%)
 Frame = +1

Query: 415 TTIGKSIGNLQVLESMEVDEVFISDDSTLKQVSECCPNFIKLKVCNS-VCKNTALLIATF 591
           T   K+IG LQ L+ M VDE  I+ D  L  V +CCP+F+ LKV    V +  A +I   
Sbjct: 78  TKFCKAIGGLQSLKGMAVDESLINYD-VLLHVHQCCPDFVGLKVSALYVDEEMASVICNS 136

Query: 592 LPKLKILDISSTNIHRKDLLVILKGCVELQSLDITNCGKIHSDDEILKIGCRRLEVFKWD 771
           LP+LK L+I S ++    ++  L    +L+ LDI+          +L+    RL+VF W+
Sbjct: 137 LPRLKKLEIPSCDMSSATIIRFLDCLEQLEHLDISGYETSAISSPVLE-KASRLKVFLWN 195

Query: 772 NAYS----DYCSECEEENEDMSYQWPCAHVMDEGFSTYIEG 882
           + +       CS C E N  ++ Q PC  +M+     ++ G
Sbjct: 196 SKFELGEFVDCSNCGEHN--INPQEPCKCMMEHKVMDWLAG 234


>ref|XP_002464344.1| hypothetical protein SORBIDRAFT_01g016660 [Sorghum bicolor]
           gi|241918198|gb|EER91342.1| hypothetical protein
           SORBIDRAFT_01g016660 [Sorghum bicolor]
          Length = 297

 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 5/157 (3%)
 Frame = +1

Query: 427 KSIGNLQVLESMEVDEVFISDDSTLKQVSECCPNFIKLKVCNS-VCKNTALLIATFLPKL 603
           K+IG L  L+ M VDE  I+ D  L  V +CCP+F++LKV    V +  A +I   LP+L
Sbjct: 140 KAIGGLHSLKGMAVDETLINYD-VLLHVHQCCPDFVELKVSALYVDEEMASVICNSLPRL 198

Query: 604 KILDISSTNIHRKDLLVILKGCVELQSLDITNCGKIHSDDEILKIGCRRLEVFKWDNAYS 783
           K L+I S ++    ++  L    EL+ LDI+          +L+    RL+ F W++ + 
Sbjct: 199 KKLEIPSADMSSAAIIKFLDCLEELEHLDISGYETSAISSLVLE-KASRLKFFLWNSKFE 257

Query: 784 ----DYCSECEEENEDMSYQWPCAHVMDEGFSTYIEG 882
                 CS C E N  ++ Q PC  +M+     ++ G
Sbjct: 258 LGEFVDCSNCGEHN--INPQEPCKCMMEHKVMDWLAG 292


>ref|XP_003562356.1| PREDICTED: putative F-box protein At4g05475-like [Brachypodium
           distachyon]
          Length = 297

 Score = 67.4 bits (163), Expect = 7e-09
 Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 5/157 (3%)
 Frame = +1

Query: 427 KSIGNLQVLESMEVDEVFISDDSTLKQVSECCPNFIKLKV-CNSVCKNTALLIATFLPKL 603
           K IG LQ L  M VDE  I+ D  L  V +CCPNF++LKV    V ++ A +I   LP+L
Sbjct: 140 KVIGKLQYLRGMAVDESLINYD-VLLHVYQCCPNFLELKVFAVYVDEDMASIICDCLPRL 198

Query: 604 KILDISSTNIHRKDLLVILKGCVELQSLDITNCGKIHSDDEILKIGCRRLEVFKWDNAYS 783
           K L+I ++++    ++  L    EL+ +DI+          +L     RL+VF W++ + 
Sbjct: 199 KKLEIPNSDMSCAAIIKFLDCLEELEYMDISGYETSVISSSVLH-KASRLKVFVWNSKFE 257

Query: 784 ----DYCSECEEENEDMSYQWPCAHVMDEGFSTYIEG 882
                 CS C E +  ++ Q PC   +D     ++ G
Sbjct: 258 LGEFKDCSNCGEHS--INPQEPCKCTIDHKVMDWLAG 292