BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029839
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36896.3| unnamed protein product [Vitis vinifera]              114   8e-24
ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helica...   114   8e-24
ref|XP_004136163.1| PREDICTED: probable ATP-dependent RNA helica...   103   1e-20
ref|XP_003516464.1| PREDICTED: probable ATP-dependent RNA helica...    96   1e-20
ref|XP_004162448.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP...   101   6e-20

>emb|CBI36896.3| unnamed protein product [Vitis vinifera]
          Length = 1098

 Score =  114 bits (285), Expect = 8e-24
 Identities = 57/103 (55%), Positives = 73/103 (70%)
 Frame = +3

Query: 3    LLEGQVLPCLRSVQQFLAAPPASILRAESLGQQWVGNLLNKLGGRSKKIDSRAMLKETWN 182
            LLEGQVLPCL SV++++AAPPASILR E+LGQ+ VGNLL+KL  R K IDS  ML+E W 
Sbjct: 988  LLEGQVLPCLGSVRKYMAAPPASILRPEALGQRRVGNLLSKLKSRPKTIDSCLMLREAWR 1047

Query: 183  DNPHVLQSEILDWFQERFRDRLKSFGTRCIVKFCWTPKNYIPK 311
            +NP  L SEILDWFQE F  + +   ++  ++    P+   PK
Sbjct: 1048 ENPRELHSEILDWFQETFHKQFEVLWSQMHLEVLLDPQERFPK 1090


>ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Vitis
            vinifera]
          Length = 1414

 Score =  114 bits (285), Expect = 8e-24
 Identities = 57/103 (55%), Positives = 73/103 (70%)
 Frame = +3

Query: 3    LLEGQVLPCLRSVQQFLAAPPASILRAESLGQQWVGNLLNKLGGRSKKIDSRAMLKETWN 182
            LLEGQVLPCL SV++++AAPPASILR E+LGQ+ VGNLL+KL  R K IDS  ML+E W 
Sbjct: 1304 LLEGQVLPCLGSVRKYMAAPPASILRPEALGQRRVGNLLSKLKSRPKTIDSCLMLREAWR 1363

Query: 183  DNPHVLQSEILDWFQERFRDRLKSFGTRCIVKFCWTPKNYIPK 311
            +NP  L SEILDWFQE F  + +   ++  ++    P+   PK
Sbjct: 1364 ENPRELHSEILDWFQETFHKQFEVLWSQMHLEVLLDPQERFPK 1406


>ref|XP_004136163.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Cucumis
            sativus]
          Length = 1333

 Score =  103 bits (258), Expect = 1e-20
 Identities = 54/104 (51%), Positives = 72/104 (69%)
 Frame = +3

Query: 3    LLEGQVLPCLRSVQQFLAAPPASILRAESLGQQWVGNLLNKLGGRSKKIDSRAMLKETWN 182
            LL+G+VLPCL SV +FLAA P+SILR E+LGQ+ VGNLL+KL  RSKKI+SRA L+  W 
Sbjct: 1222 LLKGKVLPCLTSVSEFLAARPSSILRPEALGQKRVGNLLSKL--RSKKINSRATLRAVWK 1279

Query: 183  DNPHVLQSEILDWFQERFRDRLKSFGTRCIVKFCWTPKNYIPKM 314
            DNP+ L  EILDWFQ+ +    +   ++ + +     K  I K+
Sbjct: 1280 DNPYELHLEILDWFQKSYHSHFEDLWSQMLCEVQLPQKRLIKKL 1323


>ref|XP_003516464.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Glycine
            max]
          Length = 1403

 Score = 96.3 bits (238), Expect(2) = 1e-20
 Identities = 46/78 (58%), Positives = 62/78 (79%)
 Frame = +3

Query: 3    LLEGQVLPCLRSVQQFLAAPPASILRAESLGQQWVGNLLNKLGGRSKKIDSRAMLKETWN 182
            LLEGQV PCL+SV+++++APP SI++ E+ GQ+ VGNLL+KL  +S+ IDS AML+  W 
Sbjct: 1290 LLEGQVCPCLKSVRKYMSAPPESIMKREAFGQKRVGNLLSKL--KSRLIDSSAMLRMVWK 1347

Query: 183  DNPHVLQSEILDWFQERF 236
            +NP  L SEILDWFQ+ F
Sbjct: 1348 ENPRELFSEILDWFQQSF 1365



 Score = 28.1 bits (61), Expect(2) = 1e-20
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +2

Query: 245  FEELWNQMHREVLLDPQE 298
            FEELW QM  EVL++ QE
Sbjct: 1369 FEELWLQMLNEVLMEKQE 1386


>ref|XP_004162448.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
            DHX37-like [Cucumis sativus]
          Length = 1333

 Score =  101 bits (252), Expect = 6e-20
 Identities = 53/104 (50%), Positives = 71/104 (68%)
 Frame = +3

Query: 3    LLEGQVLPCLRSVQQFLAAPPASILRAESLGQQWVGNLLNKLGGRSKKIDSRAMLKETWN 182
            LL+G+VLPCL SV +FLAA P+SILR E+LG + VGNLL+KL  RSKKI+SRA L+  W 
Sbjct: 1222 LLKGKVLPCLTSVSEFLAARPSSILRPEALGXKRVGNLLSKL--RSKKINSRATLRAVWK 1279

Query: 183  DNPHVLQSEILDWFQERFRDRLKSFGTRCIVKFCWTPKNYIPKM 314
            DNP+ L  EILDWFQ+ +    +   ++ + +     K  I K+
Sbjct: 1280 DNPYELHLEILDWFQKSYHSHFEDLWSQMLCEVQLPQKRLIKKL 1323