BLASTX nr result

ID: Coptis25_contig00029831 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029831
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171023.1| PREDICTED: dynamin-related protein 1C-like, ...   177   6e-43
ref|XP_004150620.1| PREDICTED: dynamin-related protein 1C-like [...   177   6e-43
ref|XP_002284919.1| PREDICTED: dynamin-related protein 1C [Vitis...   177   6e-43
ref|XP_002315854.1| predicted protein [Populus trichocarpa] gi|2...   176   1e-42
gb|ADN33706.1| dynamin [Cucumis melo subsp. melo]                     176   2e-42

>ref|XP_004171023.1| PREDICTED: dynamin-related protein 1C-like, partial [Cucumis
           sativus]
          Length = 546

 Score =  177 bits (450), Expect = 6e-43
 Identities = 83/106 (78%), Positives = 96/106 (90%)
 Frame = -2

Query: 425 NPSAPNMDRYADSHYRRIGSNVSAYVGMICDTLRNTIPKAVVYCQVREAKRALLNYFYSQ 246
           N +APN DRY D+H+RRIGSNVS+Y+GM+CDTL+N+IPKAVVYCQVREAKR+LLN FY Q
Sbjct: 441 NQTAPNADRYTDNHFRRIGSNVSSYIGMVCDTLKNSIPKAVVYCQVREAKRSLLNQFYVQ 500

Query: 245 VGRREKKQLSTMLDEDPALMEKRETIANRLALYKSARDEIDSVAWK 108
           VG+REK++L  MLDEDPALME+R TIA RL LYKSARDEIDSVAWK
Sbjct: 501 VGKREKERLGAMLDEDPALMERRTTIAKRLELYKSARDEIDSVAWK 546


>ref|XP_004150620.1| PREDICTED: dynamin-related protein 1C-like [Cucumis sativus]
          Length = 548

 Score =  177 bits (450), Expect = 6e-43
 Identities = 83/106 (78%), Positives = 96/106 (90%)
 Frame = -2

Query: 425 NPSAPNMDRYADSHYRRIGSNVSAYVGMICDTLRNTIPKAVVYCQVREAKRALLNYFYSQ 246
           N +APN DRY D+H+RRIGSNVS+Y+GM+CDTL+N+IPKAVVYCQVREAKR+LLN FY Q
Sbjct: 443 NQTAPNADRYTDNHFRRIGSNVSSYIGMVCDTLKNSIPKAVVYCQVREAKRSLLNQFYVQ 502

Query: 245 VGRREKKQLSTMLDEDPALMEKRETIANRLALYKSARDEIDSVAWK 108
           VG+REK++L  MLDEDPALME+R TIA RL LYKSARDEIDSVAWK
Sbjct: 503 VGKREKERLGAMLDEDPALMERRTTIAKRLELYKSARDEIDSVAWK 548


>ref|XP_002284919.1| PREDICTED: dynamin-related protein 1C [Vitis vinifera]
           gi|297737626|emb|CBI26827.3| unnamed protein product
           [Vitis vinifera]
          Length = 613

 Score =  177 bits (450), Expect = 6e-43
 Identities = 82/109 (75%), Positives = 98/109 (89%)
 Frame = -2

Query: 434 KGSNPSAPNMDRYADSHYRRIGSNVSAYVGMICDTLRNTIPKAVVYCQVREAKRALLNYF 255
           K +NPS PNMDRY + H RRIGSNVS Y+ MIC+T++N+IPKAVVYCQVREAKR+LL++F
Sbjct: 505 KNANPSGPNMDRYTEIHLRRIGSNVSGYISMICETMKNSIPKAVVYCQVREAKRSLLSHF 564

Query: 254 YSQVGRREKKQLSTMLDEDPALMEKRETIANRLALYKSARDEIDSVAWK 108
           Y+Q+GRREK+QL +MLDEDPALMEKR+ IA RL LYKSARDEIDSV+WK
Sbjct: 565 YAQLGRREKEQLGSMLDEDPALMEKRQAIAKRLELYKSARDEIDSVSWK 613


>ref|XP_002315854.1| predicted protein [Populus trichocarpa] gi|222864894|gb|EEF02025.1|
           predicted protein [Populus trichocarpa]
          Length = 613

 Score =  176 bits (447), Expect = 1e-42
 Identities = 84/106 (79%), Positives = 93/106 (87%)
 Frame = -2

Query: 425 NPSAPNMDRYADSHYRRIGSNVSAYVGMICDTLRNTIPKAVVYCQVREAKRALLNYFYSQ 246
           N   PN DRY D+H+RRIGSNVSAY+GM+CDTLRN+IPKAVVYCQVREAKR LLN FY+Q
Sbjct: 508 NQPGPNADRYNDNHFRRIGSNVSAYIGMVCDTLRNSIPKAVVYCQVREAKRCLLNNFYAQ 567

Query: 245 VGRREKKQLSTMLDEDPALMEKRETIANRLALYKSARDEIDSVAWK 108
           VGRREK++L  MLDEDP LME+R TIA RL LYKSARDEIDSVAWK
Sbjct: 568 VGRREKERLGAMLDEDPQLMERRTTIAKRLELYKSARDEIDSVAWK 613


>gb|ADN33706.1| dynamin [Cucumis melo subsp. melo]
          Length = 612

 Score =  176 bits (446), Expect = 2e-42
 Identities = 82/106 (77%), Positives = 95/106 (89%)
 Frame = -2

Query: 425 NPSAPNMDRYADSHYRRIGSNVSAYVGMICDTLRNTIPKAVVYCQVREAKRALLNYFYSQ 246
           N + PN DRY D+H+RRIGSNVS+Y+GM+CDTL+N+IPKAVVYCQVREAKR+LLN FY Q
Sbjct: 507 NQTGPNADRYTDNHFRRIGSNVSSYIGMVCDTLKNSIPKAVVYCQVREAKRSLLNQFYVQ 566

Query: 245 VGRREKKQLSTMLDEDPALMEKRETIANRLALYKSARDEIDSVAWK 108
           VG+REK++L  MLDEDPALME+R TIA RL LYKSARDEIDSVAWK
Sbjct: 567 VGKREKERLGAMLDEDPALMERRTTIAKRLELYKSARDEIDSVAWK 612


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