BLASTX nr result

ID: Coptis25_contig00029828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029828
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61960.1| hypothetical protein VITISV_013619 [Vitis vinifera]   144   1e-32
ref|XP_002265240.2| PREDICTED: uncharacterized protein LOC100249...   143   2e-32
emb|CBI38095.3| unnamed protein product [Vitis vinifera]              140   2e-31
ref|XP_002321246.1| predicted protein [Populus trichocarpa] gi|2...   135   6e-30
ref|NP_174195.1| heavy-metal-associated domain-containing protei...   133   3e-29

>emb|CAN61960.1| hypothetical protein VITISV_013619 [Vitis vinifera]
          Length = 330

 Score =  144 bits (363), Expect = 1e-32
 Identities = 75/152 (49%), Positives = 99/152 (65%), Gaps = 2/152 (1%)
 Frame = +2

Query: 56  TALYKLNLHCPQCAREIKRPLLRSQGVQSVDVDIEXXXXXXXXXXXXXXXHERIEKISKK 235
           TA+YK+NLHC QCAREI++PLLR+QG+  VD DIE                ERIEK+SKK
Sbjct: 128 TAVYKVNLHCRQCAREIQKPLLRAQGIHKVDADIEAGEIRVKGLIHTKKIQERIEKLSKK 187

Query: 236 KV-VMTLAPKTKDNXXXXXXXXXXSVSI-STTVLKVHMHCGKCEYDLKKTILKLKGVYSV 409
           KV +++   K KD+          +  I  TT +KVHMHC KCE+DL++ +L+   +YSV
Sbjct: 188 KVEIVSPQAKIKDSVATEKTVKVNTKEIVRTTTIKVHMHCEKCEHDLRRKLLRRTDIYSV 247

Query: 410 KSDFKAGTLTVDGTLDPPKLVKYIHKKVRKHA 505
           K+D KA  LTV+GT++  KL+ YI KKV KHA
Sbjct: 248 KTDMKAQKLTVEGTVESDKLIGYIRKKVHKHA 279


>ref|XP_002265240.2| PREDICTED: uncharacterized protein LOC100249861 [Vitis vinifera]
          Length = 236

 Score =  143 bits (361), Expect = 2e-32
 Identities = 74/153 (48%), Positives = 99/153 (64%), Gaps = 3/153 (1%)
 Frame = +2

Query: 56  TALYKLNLHCPQCAREIKRPLLRSQGVQSVDVDIEXXXXXXXXXXXXXXXHERIEKISKK 235
           TA+YK+NLHC QCAREI++PLLR+QG+  VD DIE                ERIEK+SKK
Sbjct: 17  TAVYKVNLHCRQCAREIQKPLLRAQGIHKVDADIEAGEIRVKGLIHTKKIQERIEKLSKK 76

Query: 236 KV-VMTLAPKTKDNXXXXXXXXXXSVS--ISTTVLKVHMHCGKCEYDLKKTILKLKGVYS 406
           KV +++   K KD+          +    + TT +KVHMHC KCE+DL++ +L+   +YS
Sbjct: 77  KVEIVSPQAKIKDSVATEKTVKVNTKEAIVRTTTIKVHMHCEKCEHDLRRKLLRRTDIYS 136

Query: 407 VKSDFKAGTLTVDGTLDPPKLVKYIHKKVRKHA 505
           VK+D KA  LTV+GT++  KL+ YI KKV KHA
Sbjct: 137 VKTDMKAQKLTVEGTVESDKLIGYIRKKVHKHA 169


>emb|CBI38095.3| unnamed protein product [Vitis vinifera]
          Length = 222

 Score =  140 bits (352), Expect = 2e-31
 Identities = 75/156 (48%), Positives = 100/156 (64%), Gaps = 6/156 (3%)
 Frame = +2

Query: 56  TALYKLNLHCPQCAREIKRPLLRSQ-GVQSVDVDIEXXXXXXXXXXXXXXXHERIEKISK 232
           TA+YK+NLHC QCAREI++PLLR+Q G+  VD DIE                ERIEK+SK
Sbjct: 17  TAVYKVNLHCRQCAREIQKPLLRAQAGIHKVDADIEAGEIRVKGLIHTKKIQERIEKLSK 76

Query: 233 KKV-VMTLAPKTKDNXXXXXXXXXXSVSIST----TVLKVHMHCGKCEYDLKKTILKLKG 397
           KKV +++   K KD+          +  +ST    T +KVHMHC KCE+DL++ +L+   
Sbjct: 77  KKVEIVSPQAKIKDSVATEKTVKVNTKEVSTIVRTTTIKVHMHCEKCEHDLRRKLLRRTD 136

Query: 398 VYSVKSDFKAGTLTVDGTLDPPKLVKYIHKKVRKHA 505
           +YSVK+D KA  LTV+GT++  KL+ YI KKV KHA
Sbjct: 137 IYSVKTDMKAQKLTVEGTVESDKLIGYIRKKVHKHA 172


>ref|XP_002321246.1| predicted protein [Populus trichocarpa] gi|222862019|gb|EEE99561.1|
           predicted protein [Populus trichocarpa]
          Length = 260

 Score =  135 bits (340), Expect = 6e-30
 Identities = 71/152 (46%), Positives = 97/152 (63%)
 Frame = +2

Query: 50  LITALYKLNLHCPQCAREIKRPLLRSQGVQSVDVDIEXXXXXXXXXXXXXXXHERIEKIS 229
           +ITA+YK+NLHC QCAR+IK+PLL +QGV SV+ D E               H+ +EK+S
Sbjct: 12  VITAVYKVNLHCQQCARDIKKPLLSTQGVHSVEADAEKSEIKVKGVIDVIKIHKLLEKLS 71

Query: 230 KKKVVMTLAPKTKDNXXXXXXXXXXSVSISTTVLKVHMHCGKCEYDLKKTILKLKGVYSV 409
           KKKV + ++P  K               +ST  +KVH+HC KCE DL+  +LK + +YSV
Sbjct: 72  KKKVEL-VSPLVK---VTESVTEKKEPKLSTHSIKVHLHCDKCEKDLRDKLLKHRSIYSV 127

Query: 410 KSDFKAGTLTVDGTLDPPKLVKYIHKKVRKHA 505
           K+D KA T+TVDGT++  KLV Y+ KKV K+A
Sbjct: 128 KTDMKAQTITVDGTMEGDKLVAYMRKKVHKNA 159


>ref|NP_174195.1| heavy-metal-associated domain-containing protein [Arabidopsis
           thaliana] gi|10764865|gb|AAF24557.2|AC007508_20 F1K23.4
           [Arabidopsis thaliana] gi|332192906|gb|AEE31027.1|
           heavy-metal-associated domain-containing protein
           [Arabidopsis thaliana]
          Length = 287

 Score =  133 bits (334), Expect = 3e-29
 Identities = 75/166 (45%), Positives = 101/166 (60%), Gaps = 11/166 (6%)
 Frame = +2

Query: 41  GHGLITALYKLNLHCPQCAREIKRPLLRSQGVQSVDVDIEXXXXXXXXXXXXXXXHERIE 220
           G  +ITA+YK++LHC +CA +IK+PLLR QGVQ+VD D+E               H++IE
Sbjct: 11  GDEIITAVYKVHLHCRKCACDIKKPLLRFQGVQNVDFDLEKNEIKVKGKIEVVKIHKQIE 70

Query: 221 KISKKKVVMTLAPKTKDNXXXXXXXXXXSVS-----------ISTTVLKVHMHCGKCEYD 367
           K SKKKV + ++PK  +           SV            I TTVLKVH+HC +C+ D
Sbjct: 71  KWSKKKVEL-ISPKPSEVKKTTTTTTTTSVVEKKTTEIKKDVIRTTVLKVHIHCAQCDKD 129

Query: 368 LKKTILKLKGVYSVKSDFKAGTLTVDGTLDPPKLVKYIHKKVRKHA 505
           L+  +LK K ++ VK+D KA TLTV GT++  KL+ YI KKV KHA
Sbjct: 130 LQHKLLKHKAIHIVKTDTKAQTLTVQGTIESAKLLAYIKKKVHKHA 175


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