BLASTX nr result

ID: Coptis25_contig00029819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029819
         (762 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                 90   2e-19
emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera]    76   7e-12
emb|CAN66028.1| hypothetical protein VITISV_020472 [Vitis vinifera]    75   2e-11
emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera]    74   4e-11
emb|CBI31290.3| unnamed protein product [Vitis vinifera]               72   1e-10

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 89.7 bits (221), Expect(2) = 2e-19
 Identities = 42/82 (51%), Positives = 60/82 (73%)
 Frame = +1

Query: 94  MGMETSKDLWNILERRFAAITQSHQHQLKNKLQAAKKGNDSMGEFLQRIKEISDSLAAAG 273
           +GME S+ LW  LERRF+  +++H H L++K+Q   KG+ SM +FL  IKEIS+ LAAAG
Sbjct: 354 IGMEDSRSLWQSLERRFSGASRTHVHSLRSKIQTIHKGDSSMTDFLNSIKEISNKLAAAG 413

Query: 274 VVISVAYLVSYVYNGLPSEYEA 339
             +S + LV+Y+ +GLP EYE+
Sbjct: 414 EPLSESDLVAYILSGLPDEYES 435



 Score = 32.0 bits (71), Expect(2) = 2e-19
 Identities = 12/21 (57%), Positives = 18/21 (85%)
 Frame = +3

Query: 27  WVKQDQILLIWINATLFETVL 89
           W ++DQIL+IWIN+TL + +L
Sbjct: 330 WCERDQILMIWINSTLSKDLL 350


>emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera]
          Length = 1312

 Score = 76.3 bits (186), Expect = 7e-12
 Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 7/225 (3%)
 Frame = +1

Query: 94  MGMETSKDLWNILERRFAAITQSHQHQLKNKLQAAKKGNDSMGEFLQRIKEISDSLAAAG 273
           +G++TS + W  L+R F+A T++   QL+   Q  KKG+ +M E++Q++K ISDSLAA G
Sbjct: 105 VGLQTSHEAWTALQRSFSASTKARTMQLRLAFQTTKKGSLTMMEYIQKLKHISDSLAAIG 164

Query: 274 VVISVAYLVSYVYNGLPSEYEALCIFS*VKRXXXXXXXXXXXXXXXXHSVRVNASSNAYK 453
             +     +  + +GL +EY    I + +                  H  R++  +   +
Sbjct: 165 EPVPEKDQILQLLSGLGAEYNP--IVASLTARDDDIQLHAVHSILLTHEQRLHLQTTXTE 222

Query: 454 NFXXXXXXXXXXXXXXXXXXXXXXXYNNNTQGRGYNQNYMSYIQGST---SSNQYSQGLK 624
                                     N  +QG+   Q++M  I+  T   S  QY QG +
Sbjct: 223 E-------DLLIANFXTHNRPRRSQSNKPSQGKP-PQSFMPTIRPDTLPDSRQQYPQGYR 274

Query: 625 ----SSNYQPPIGRIQCQIYGRRGHAAIDCFNMMNHAYQGRQPPS 747
               ++N      R QCQ+ G+ GH  + C++  +  YQG + P+
Sbjct: 275 PNRFNNNRSRTNNRPQCQLCGKFGHMVLSCYHRFDVNYQGPRAPA 319


>emb|CAN66028.1| hypothetical protein VITISV_020472 [Vitis vinifera]
          Length = 823

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 61/223 (27%), Positives = 90/223 (40%), Gaps = 1/223 (0%)
 Frame = +1

Query: 97  GMETSKDLWNILERRFAAITQSHQHQLKNKLQAAKKGNDSMGEFLQRIKEISDSLAAAGV 276
           G+E SK +W  L+ RF++ + SH   LK +LQ   +   S  E+L+  K ++D LAAAG 
Sbjct: 51  GLEMSKQVWTTLQTRFSSQSCSHISHLKRQLQTLTQSTKSCSEYLENAKNLADQLAAAGK 110

Query: 277 VISVAYLVSYVYNGLPSEYEA-LCIFS*VKRXXXXXXXXXXXXXXXXHSVRVNASSNAYK 453
            I    L+S++  GL S Y   +  F+ V                        A    Y+
Sbjct: 111 PIDDQDLISFLLGGLQSSYTPFVTSFNFVSHDTDFTFE------------EFQAELLGYE 158

Query: 454 NFXXXXXXXXXXXXXXXXXXXXXXXYNNNTQGRGYNQNYMSYIQGSTSSNQYSQGLKSSN 633
           N                             + +G   N        +S+ Q  Q   S++
Sbjct: 159 NLLDVNQSVPGTDSNHFAFSANKSKAPTYVKKKGPPLNPTKMQNVGSSNYQPHQQTISTS 218

Query: 634 YQPPIGRIQCQIYGRRGHAAIDCFNMMNHAYQGRQPPSKLQVM 762
            Q        QI G+ GH AIDCF+  +++YQGR PP  L  M
Sbjct: 219 PQHSNYHPVXQICGKFGHTAIDCFHHFDYSYQGRFPPQDLIAM 261


>emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera]
          Length = 1074

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 7/220 (3%)
 Frame = +1

Query: 94  MGMETSKDLWNILERRFAAITQSHQHQLKNKLQAAKKGNDSMGEFLQRIKEISDSLAAAG 273
           +G++TS + W  L++ F+A T++   QL+   Q  KKG+ +M E++Q++K ISDSLAA G
Sbjct: 61  VGLQTSHEAWTALQQSFSASTKARTMQLRLAFQTTKKGSLTMMEYIQKLKHISDSLAAIG 120

Query: 274 VVISVAYLVSYVYNGLPSEYEALCIFS*VKRXXXXXXXXXXXXXXXXHSVRVNASSNAYK 453
             +     +  + +GL +EY    I + +                  H  R++  + A +
Sbjct: 121 EPVPEKDQILQLLSGLGAEYNP--IVASLTARDDDIQLHAVHSILLTHEQRLHLQTTATE 178

Query: 454 NFXXXXXXXXXXXXXXXXXXXXXXXYNNNTQGRGYNQNYMSYIQGST---SSNQYSQGLK 624
                                     N  +QG+   Q++M  I+  T   S  QY QG +
Sbjct: 179 E-------DLLIANFATHNRPRKSQSNKPSQGKP-PQSFMPTIRPDTLPDSRQQYPQGYR 230

Query: 625 ----SSNYQPPIGRIQCQIYGRRGHAAIDCFNMMNHAYQG 732
               ++N      R QCQ+ G+ GH    C++  +  YQG
Sbjct: 231 PNRFNNNRSRTNNRPQCQLCGKFGHMVFSCYHRFDVNYQG 270


>emb|CBI31290.3| unnamed protein product [Vitis vinifera]
          Length = 1201

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 58/225 (25%), Positives = 99/225 (44%), Gaps = 7/225 (3%)
 Frame = +1

Query: 94  MGMETSKDLWNILERRFAAITQSHQHQLKNKLQAAKKGNDSMGEFLQRIKEISDSLAAAG 273
           +G++TS + W  L+R F+A T++   QL+   Q  KKG+ +M E++Q++K ISDSLAA G
Sbjct: 205 VGLQTSHEAWTALQRSFSASTKARTMQLRLAFQTNKKGSLTMMEYIQKLKHISDSLAAIG 264

Query: 274 VVISVAYLVSYVYNGLPSEYEALCIFS*VKRXXXXXXXXXXXXXXXXHSVRVNASSNAYK 453
             +     +  + +GL +EY    I + +                  H  R+   +   +
Sbjct: 265 EPVPEKDQILQLLSGLGAEYNP--IIASLTTRDDDIQLHAVHSILLTHEQRLPLQTTPTE 322

Query: 454 NFXXXXXXXXXXXXXXXXXXXXXXXYNNNTQGRGYNQNYMSYIQGST---SSNQYSQGLK 624
                                        +QG+   Q++M  I+  T   S  QY QG +
Sbjct: 323 E-------DLLIANFATHNRPRRSQSKKPSQGKP-PQSFMPTIRPDTLLDSRQQYPQGYR 374

Query: 625 ----SSNYQPPIGRIQCQIYGRRGHAAIDCFNMMNHAYQGRQPPS 747
               ++N      R QCQ+ G+ GH  + C++  +  YQG + P+
Sbjct: 375 PNRFNNNRSRTNNRPQCQLCGKFGHMVLSCYHRFDVNYQGPRAPA 419


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