BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029797
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15765.3| unnamed protein product [Vitis vinifera]              224   2e-56
ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containi...   221   1e-55
emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]   221   1e-55
ref|XP_002511082.1| pentatricopeptide repeat-containing protein,...   196   5e-48
dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas]                         195   8e-48

>emb|CBI15765.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  224 bits (570), Expect = 2e-56
 Identities = 100/203 (49%), Positives = 144/203 (70%)
 Frame = +3

Query: 177 PDYRTISYVLEACKMVCSVNIALETHSRVIKCGFESYPXXXXXXXXXYAVCGWPDYGHRV 356
           PD++ ++ +LEACK       A ++H+++IK G+ +YP         YA C   D  H++
Sbjct: 45  PDHQKLNCILEACKFSSDFRTAFQSHAKIIKFGYGTYPSLITSLVSTYAHCDCLDLAHQL 104

Query: 357 SDEIPDWGFSVVLGNVIIGSYLRMGGFDEANRVFRRMGHRDVVSWNTMIAGCVKNARPKE 536
            DE+P WGF ++  N+II S +++G FD A RVFR+M  RDVV+WN+MI GCV+N R +E
Sbjct: 105 LDEMPYWGFDLITANLIIASLMKVGEFDFAKRVFRKMLRRDVVTWNSMIGGCVRNERFEE 164

Query: 537 AISFFRKMLKSGFEPDGFSFASVLTACGRLGALSHGEWIHSLMVERDVEINFILSSALID 716
           A+ FFR+ML S  EPDGF+FASV+  C RLG+  H E +H LM+E+ +++NFILSSALID
Sbjct: 165 ALRFFREMLNSNVEPDGFTFASVINGCARLGSSHHAELVHGLMIEKKIQLNFILSSALID 224

Query: 717 MYSKCGNVGAAREVFDSVRRDDV 785
           +YSKCG +  A++VF+S++ DDV
Sbjct: 225 LYSKCGRINTAKKVFNSIQHDDV 247



 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 58/250 (23%), Positives = 95/250 (38%), Gaps = 1/250 (0%)
 Frame = +3

Query: 3   KFQFIQTCLMKCLREQYSTVYYISPYIYNSMIRASIEKGSPTKALLDYKAILVYGVFKPD 182
           +F F +    K LR    T        +NSMI   +      +AL  ++ +L   V +PD
Sbjct: 130 EFDFAKRVFRKMLRRDVVT--------WNSMIGGCVRNERFEEALRFFREMLNSNV-EPD 180

Query: 183 YRTISYVLEACKMVCSVNIALETHSRVIKCGFESYPXXXXXXXXXYAVCGWPDYGHRVSD 362
             T + V+  C  + S + A   H  +I+   +                           
Sbjct: 181 GFTFASVINGCARLGSSHHAELVHGLMIEKKIQ--------------------------- 213

Query: 363 EIPDWGFSVVLGNVIIGSYLRMGGFDEANRVFRRMGHRDVVSWNTMIAGCVKNARPKEAI 542
                  + +L + +I  Y + G  + A +VF  + H DV  WN+MI G   +    +AI
Sbjct: 214 ------LNFILSSALIDLYSKCGRINTAKKVFNSIQHDDVSVWNSMINGLAIHGLALDAI 267

Query: 543 SFFRKMLKSGFEPDGFSFASVLTACGRLGALSHGEWIHSLMVER-DVEINFILSSALIDM 719
             F +M      PD  +F  +LTAC   G +  G     LM     ++       A++D+
Sbjct: 268 GVFSQMEMESVSPDSITFIGILTACSHCGLVEQGRRYFDLMRRHYSIQPQLEHYGAMVDL 327

Query: 720 YSKCGNVGAA 749
             + G V  A
Sbjct: 328 LGRAGLVEEA 337


>ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990
           [Vitis vinifera]
          Length = 523

 Score =  221 bits (563), Expect = 1e-55
 Identities = 99/202 (49%), Positives = 143/202 (70%)
 Frame = +3

Query: 180 DYRTISYVLEACKMVCSVNIALETHSRVIKCGFESYPXXXXXXXXXYAVCGWPDYGHRVS 359
           D++ ++ +LEACK       A ++H+++IK G+ +YP         YA C   D  H++ 
Sbjct: 19  DHQKLNCILEACKFSSDFRTAFQSHAKIIKFGYGTYPSLITSLVSTYAHCDCLDLAHQLL 78

Query: 360 DEIPDWGFSVVLGNVIIGSYLRMGGFDEANRVFRRMGHRDVVSWNTMIAGCVKNARPKEA 539
           DE+P WGF ++  N+II S +++G FD A RVFR+M  RDVV+WN+MI GCV+N R +EA
Sbjct: 79  DEMPYWGFDLITANLIIASLMKVGEFDFAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEA 138

Query: 540 ISFFRKMLKSGFEPDGFSFASVLTACGRLGALSHGEWIHSLMVERDVEINFILSSALIDM 719
           + FFR+ML S  EPDGF+FASV+  C RLG+  H E +H LM+E+ +++NFILSSALID+
Sbjct: 139 LRFFREMLNSNVEPDGFTFASVINGCARLGSSHHAELVHGLMIEKKIQLNFILSSALIDL 198

Query: 720 YSKCGNVGAAREVFDSVRRDDV 785
           YSKCG +  A++VF+S++ DDV
Sbjct: 199 YSKCGRINTAKKVFNSIQHDDV 220



 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 58/250 (23%), Positives = 95/250 (38%), Gaps = 1/250 (0%)
 Frame = +3

Query: 3   KFQFIQTCLMKCLREQYSTVYYISPYIYNSMIRASIEKGSPTKALLDYKAILVYGVFKPD 182
           +F F +    K LR    T        +NSMI   +      +AL  ++ +L   V +PD
Sbjct: 103 EFDFAKRVFRKMLRRDVVT--------WNSMIGGCVRNERFEEALRFFREMLNSNV-EPD 153

Query: 183 YRTISYVLEACKMVCSVNIALETHSRVIKCGFESYPXXXXXXXXXYAVCGWPDYGHRVSD 362
             T + V+  C  + S + A   H  +I+   +                           
Sbjct: 154 GFTFASVINGCARLGSSHHAELVHGLMIEKKIQ--------------------------- 186

Query: 363 EIPDWGFSVVLGNVIIGSYLRMGGFDEANRVFRRMGHRDVVSWNTMIAGCVKNARPKEAI 542
                  + +L + +I  Y + G  + A +VF  + H DV  WN+MI G   +    +AI
Sbjct: 187 ------LNFILSSALIDLYSKCGRINTAKKVFNSIQHDDVSVWNSMINGLAIHGLALDAI 240

Query: 543 SFFRKMLKSGFEPDGFSFASVLTACGRLGALSHGEWIHSLMVER-DVEINFILSSALIDM 719
             F +M      PD  +F  +LTAC   G +  G     LM     ++       A++D+
Sbjct: 241 GVFSQMEMESVSPDSITFIGILTACSHCGLVEQGRRYFDLMRRHYSIQPQLEHYGAMVDL 300

Query: 720 YSKCGNVGAA 749
             + G V  A
Sbjct: 301 LGRAGLVEEA 310


>emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]
          Length = 562

 Score =  221 bits (563), Expect = 1e-55
 Identities = 99/202 (49%), Positives = 143/202 (70%)
 Frame = +3

Query: 180 DYRTISYVLEACKMVCSVNIALETHSRVIKCGFESYPXXXXXXXXXYAVCGWPDYGHRVS 359
           D++ ++ +LEACK       A ++H+++IK G+ +YP         YA C   D  H++ 
Sbjct: 58  DHQKLNCILEACKFSSDFRTAFQSHAKIIKFGYGTYPSLITSLVSTYAHCDCLDLAHQLL 117

Query: 360 DEIPDWGFSVVLGNVIIGSYLRMGGFDEANRVFRRMGHRDVVSWNTMIAGCVKNARPKEA 539
           DE+P WGF ++  N+II S +++G FD A RVFR+M  RDVV+WN+MI GCV+N R +EA
Sbjct: 118 DEMPYWGFDLITANLIIASLMKVGEFDFAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEA 177

Query: 540 ISFFRKMLKSGFEPDGFSFASVLTACGRLGALSHGEWIHSLMVERDVEINFILSSALIDM 719
           + FFR+ML S  EPDGF+FASV+  C RLG+  H E +H LM+E+ +++NFILSSALID+
Sbjct: 178 LRFFREMLNSNVEPDGFTFASVINGCARLGSSHHAELVHGLMIEKKIQLNFILSSALIDL 237

Query: 720 YSKCGNVGAAREVFDSVRRDDV 785
           YSKCG +  A++VF+S++ DDV
Sbjct: 238 YSKCGRINTAKKVFNSIQHDDV 259



 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 58/250 (23%), Positives = 95/250 (38%), Gaps = 1/250 (0%)
 Frame = +3

Query: 3   KFQFIQTCLMKCLREQYSTVYYISPYIYNSMIRASIEKGSPTKALLDYKAILVYGVFKPD 182
           +F F +    K LR    T        +NSMI   +      +AL  ++ +L   V +PD
Sbjct: 142 EFDFAKRVFRKMLRRDVVT--------WNSMIGGCVRNERFEEALRFFREMLNSNV-EPD 192

Query: 183 YRTISYVLEACKMVCSVNIALETHSRVIKCGFESYPXXXXXXXXXYAVCGWPDYGHRVSD 362
             T + V+  C  + S + A   H  +I+   +                           
Sbjct: 193 GFTFASVINGCARLGSSHHAELVHGLMIEKKIQ--------------------------- 225

Query: 363 EIPDWGFSVVLGNVIIGSYLRMGGFDEANRVFRRMGHRDVVSWNTMIAGCVKNARPKEAI 542
                  + +L + +I  Y + G  + A +VF  + H DV  WN+MI G   +    +AI
Sbjct: 226 ------LNFILSSALIDLYSKCGRINTAKKVFNSIQHDDVSVWNSMINGLAIHGLALDAI 279

Query: 543 SFFRKMLKSGFEPDGFSFASVLTACGRLGALSHGEWIHSLMVER-DVEINFILSSALIDM 719
             F +M      PD  +F  +LTAC   G +  G     LM     ++       A++D+
Sbjct: 280 GVFSQMEMESVSPDSITFIGILTACSHCGLVEQGRRYFDLMRRHYSIQPQLEHYGAMVDL 339

Query: 720 YSKCGNVGAA 749
             + G V  A
Sbjct: 340 LGRAGLVEEA 349


>ref|XP_002511082.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550197|gb|EEF51684.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 274

 Score =  196 bits (498), Expect = 5e-48
 Identities = 94/202 (46%), Positives = 138/202 (68%)
 Frame = +3

Query: 180 DYRTISYVLEACKMVCSVNIALETHSRVIKCGFESYPXXXXXXXXXYAVCGWPDYGHRVS 359
           DY+   ++LEACK+   +  A+ETH+R+I+ G+ +YP         Y  C   +    V 
Sbjct: 9   DYQLFIHLLEACKLSLDLKTAIETHARIIRFGYGTYPSLAASLVSTYVKCDHFNLACEVI 68

Query: 360 DEIPDWGFSVVLGNVIIGSYLRMGGFDEANRVFRRMGHRDVVSWNTMIAGCVKNARPKEA 539
           +++  W  ++V  N++I + +R+G  + A +VF +M  RDVV+WN++I G VKNAR +EA
Sbjct: 69  NQVFSWTVNLVALNLVIDNIMRVGECEIAKKVFYKMPARDVVTWNSLIGGYVKNARFEEA 128

Query: 540 ISFFRKMLKSGFEPDGFSFASVLTACGRLGALSHGEWIHSLMVERDVEINFILSSALIDM 719
           + FFR ML S  EPD F+FASV+TAC RLGAL + +W+H LM+++ VE+N ILSSALIDM
Sbjct: 129 LRFFRVMLGSDIEPDKFTFASVITACARLGALDNAQWVHDLMIQKRVELNCILSSALIDM 188

Query: 720 YSKCGNVGAAREVFDSVRRDDV 785
           +SKCG +  A+E F+SV+R DV
Sbjct: 189 FSKCGRIRTAKETFESVQRSDV 210


>dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas]
          Length = 514

 Score =  195 bits (496), Expect = 8e-48
 Identities = 93/203 (45%), Positives = 138/203 (67%)
 Frame = +3

Query: 177 PDYRTISYVLEACKMVCSVNIALETHSRVIKCGFESYPXXXXXXXXXYAVCGWPDYGHRV 356
           PD++    +LEACK+   +  A ETH+R+I+ G+ +           Y  C   +  ++V
Sbjct: 9   PDHQLFCDLLEACKLSQDIRTATETHTRIIRFGYGTNSSIAASLISTYVNCNQLNLAYQV 68

Query: 357 SDEIPDWGFSVVLGNVIIGSYLRMGGFDEANRVFRRMGHRDVVSWNTMIAGCVKNARPKE 536
             ++  W  S+   N++I S++R+G ++ A +VF +M  RDVV+WN+MI G V+N + +E
Sbjct: 69  IRQVFSWTVSLAGLNLVIDSFMRIGEYEIAKKVFCKMPDRDVVTWNSMIGGYVRNGKFEE 128

Query: 537 AISFFRKMLKSGFEPDGFSFASVLTACGRLGALSHGEWIHSLMVERDVEINFILSSALID 716
           A+  F+ ML S  EPD F+FASV+TAC RLGAL+H +W+H LMV++ +E+NFILSSALID
Sbjct: 129 ALRSFQAMLSSNVEPDKFTFASVITACARLGALNHAQWLHDLMVQKRIEVNFILSSALID 188

Query: 717 MYSKCGNVGAAREVFDSVRRDDV 785
           MYSKCG +  A+EVF+SV R+DV
Sbjct: 189 MYSKCGRIETAKEVFESVERNDV 211