BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029793
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279556.1| PREDICTED: psbP-like protein 2, chloroplasti...   145   3e-33
ref|XP_004169488.1| PREDICTED: psbP-like protein 2, chloroplasti...   139   2e-31
ref|XP_004149826.1| PREDICTED: psbP-like protein 2, chloroplasti...   139   2e-31
ref|NP_001173365.1| Os03g0279950 [Oryza sativa Japonica Group] g...   135   4e-30
ref|XP_003558210.1| PREDICTED: psbP-like protein 2, chloroplasti...   132   3e-29

>ref|XP_002279556.1| PREDICTED: psbP-like protein 2, chloroplastic [Vitis vinifera]
           gi|296086288|emb|CBI31729.3| unnamed protein product
           [Vitis vinifera]
          Length = 235

 Score =  145 bits (366), Expect = 3e-33
 Identities = 75/134 (55%), Positives = 94/134 (70%), Gaps = 4/134 (2%)
 Frame = -3

Query: 390 AASPLSLSWVSTLPKQLTESKTTIT----ARYTACPTLTINACSGDAISNEEACSRRLPI 223
           A S LSL WVST      +   +I     A +T+C +  I+ACS +   +EE+   R  +
Sbjct: 2   ALSSLSLGWVSTTISNKLDLPHSIDVPRFAAFTSCNS--ISACSRETAFDEESHLERRSL 59

Query: 222 LFGLGALAANFFQASSVSAEEVPKNYRAFLDSEDGYTYYYPSDWRDFDFRGHDSAFKDRY 43
           L G+G LAAN F ASS+ AEE+P NY+AF+D  DGY+YYYP DWR+F+FRGHDSAFKDRY
Sbjct: 60  LLGVGLLAANLFPASSLHAEEIPANYKAFVDLSDGYSYYYPLDWREFEFRGHDSAFKDRY 119

Query: 42  LALQNVRVSFIPTN 1
           L LQNVRVSFIPT+
Sbjct: 120 LQLQNVRVSFIPTD 133


>ref|XP_004169488.1| PREDICTED: psbP-like protein 2, chloroplastic-like, partial
           [Cucumis sativus]
          Length = 202

 Score =  139 bits (351), Expect = 2e-31
 Identities = 75/133 (56%), Positives = 88/133 (66%), Gaps = 4/133 (3%)
 Frame = -3

Query: 390 AASPLSLSWV----STLPKQLTESKTTITARYTACPTLTINACSGDAISNEEACSRRLPI 223
           A S   LSWV    S    +L       TA  +   + TIN CS + IS +E    R P+
Sbjct: 2   AVSTSCLSWVPATASNWKLKLLPFNEPSTATSSFSSSSTIN-CSIERISRDEGIYNRRPL 60

Query: 222 LFGLGALAANFFQASSVSAEEVPKNYRAFLDSEDGYTYYYPSDWRDFDFRGHDSAFKDRY 43
           L G+GALA +   AS + AEE+PKNYRAF+DS DGY+YYYPSDWR+FDFR HDSAFKDRY
Sbjct: 61  LLGVGALATSLLGASPLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120

Query: 42  LALQNVRVSFIPT 4
           L LQNVRV FIPT
Sbjct: 121 LQLQNVRVKFIPT 133


>ref|XP_004149826.1| PREDICTED: psbP-like protein 2, chloroplastic-like [Cucumis
           sativus]
          Length = 236

 Score =  139 bits (351), Expect = 2e-31
 Identities = 75/133 (56%), Positives = 88/133 (66%), Gaps = 4/133 (3%)
 Frame = -3

Query: 390 AASPLSLSWV----STLPKQLTESKTTITARYTACPTLTINACSGDAISNEEACSRRLPI 223
           A S   LSWV    S    +L       TA  +   + TIN CS + IS +E    R P+
Sbjct: 2   AVSTSCLSWVPATASNWKLKLLPFNEPSTATSSFSSSSTIN-CSIERISRDEGIYNRRPL 60

Query: 222 LFGLGALAANFFQASSVSAEEVPKNYRAFLDSEDGYTYYYPSDWRDFDFRGHDSAFKDRY 43
           L G+GALA +   AS + AEE+PKNYRAF+DS DGY+YYYPSDWR+FDFR HDSAFKDRY
Sbjct: 61  LLGVGALATSLLGASPLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120

Query: 42  LALQNVRVSFIPT 4
           L LQNVRV FIPT
Sbjct: 121 LQLQNVRVKFIPT 133


>ref|NP_001173365.1| Os03g0279950 [Oryza sativa Japonica Group]
           gi|222624678|gb|EEE58810.1| hypothetical protein
           OsJ_10361 [Oryza sativa Japonica Group]
           gi|255674406|dbj|BAH92093.1| Os03g0279950 [Oryza sativa
           Japonica Group]
          Length = 232

 Score =  135 bits (339), Expect = 4e-30
 Identities = 64/120 (53%), Positives = 85/120 (70%)
 Frame = -3

Query: 363 VSTLPKQLTESKTTITARYTACPTLTINACSGDAISNEEACSRRLPILFGLGALAANFFQ 184
           + ++ KQL      +T++  A P   +NA S +A S+E+  +RR   L G GALA    +
Sbjct: 8   ICSVSKQLVAPNCAVTSKLNASPLSVVNASSSEASSDEKNVTRRRLALLGAGALATGLLK 67

Query: 183 ASSVSAEEVPKNYRAFLDSEDGYTYYYPSDWRDFDFRGHDSAFKDRYLALQNVRVSFIPT 4
           +SS  AEEVPKNY++++DS+DGY+Y YP+DWRDFDF GHDSAFKDR +ALQ VRV FIPT
Sbjct: 68  SSSAYAEEVPKNYKSYVDSKDGYSYLYPADWRDFDFLGHDSAFKDRNVALQCVRVGFIPT 127


>ref|XP_003558210.1| PREDICTED: psbP-like protein 2, chloroplastic-like [Brachypodium
           distachyon]
          Length = 226

 Score =  132 bits (332), Expect = 3e-29
 Identities = 63/119 (52%), Positives = 82/119 (68%)
 Frame = -3

Query: 360 STLPKQLTESKTTITARYTACPTLTINACSGDAISNEEACSRRLPILFGLGALAANFFQA 181
           S + KQL     T+TAR    P   +NA S +A S+E+  ++R   L G GAL+      
Sbjct: 3   SLISKQLVALNCTVTARLNGAPPSVVNASSSEASSDEKKVTKRRLALLGAGALSTVLLNR 62

Query: 180 SSVSAEEVPKNYRAFLDSEDGYTYYYPSDWRDFDFRGHDSAFKDRYLALQNVRVSFIPT 4
           SS  AEEVPKNYR+++D+ DGY+Y YP+DWRDFDF GHDSAFKD+ + LQ+VRV+FIPT
Sbjct: 63  SSAYAEEVPKNYRSYVDANDGYSYLYPADWRDFDFLGHDSAFKDKNVQLQSVRVAFIPT 121