BLASTX nr result

ID: Coptis25_contig00029743 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029743
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529803.1| PREDICTED: palmitoyl-monogalactosyldiacylgly...    85   5e-15
ref|XP_004152346.1| PREDICTED: palmitoyl-monogalactosyldiacylgly...    83   2e-14
ref|XP_003604375.1| Palmitoyl-monogalactosyldiacylglycerol delta...    83   2e-14
ref|NP_001237468.1| uncharacterized protein LOC100527024 [Glycin...    83   2e-14
ref|XP_004152343.1| PREDICTED: palmitoyl-monogalactosyldiacylgly...    83   3e-14

>ref|XP_003529803.1| PREDICTED: palmitoyl-monogalactosyldiacylglycerol delta-7
           desaturase, chloroplastic-like [Glycine max]
          Length = 390

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 37/48 (77%), Positives = 42/48 (87%)
 Frame = +1

Query: 250 HTMCLFAPFTFNWGAFTVAIVLQVVTGLFGITLSYHRNLTHRSFKLPK 393
           H +CLFAPF FNW AF VA+ L +VTGLFGITLS+HRNL+HRSFKLPK
Sbjct: 128 HLLCLFAPFHFNWPAFRVAVALYIVTGLFGITLSFHRNLSHRSFKLPK 175


>ref|XP_004152346.1| PREDICTED: palmitoyl-monogalactosyldiacylglycerol delta-7
           desaturase, chloroplastic-like [Cucumis sativus]
           gi|449515927|ref|XP_004164999.1| PREDICTED:
           palmitoyl-monogalactosyldiacylglycerol delta-7
           desaturase, chloroplastic-like [Cucumis sativus]
          Length = 380

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 37/51 (72%), Positives = 43/51 (84%)
 Frame = +1

Query: 241 VVSHTMCLFAPFTFNWGAFTVAIVLQVVTGLFGITLSYHRNLTHRSFKLPK 393
           V +H + LFAPF FNW AF VAI L ++TGLFGITLS+HRNL+HRSFKLPK
Sbjct: 118 VATHLLTLFAPFQFNWAAFWVAISLYIITGLFGITLSFHRNLSHRSFKLPK 168


>ref|XP_003604375.1| Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase [Medicago
           truncatula] gi|355505430|gb|AES86572.1|
           Palmitoyl-monogalactosyldiacylglycerol delta-7
           desaturase [Medicago truncatula]
          Length = 572

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 37/55 (67%), Positives = 43/55 (78%)
 Frame = +1

Query: 229 FYSAVVSHTMCLFAPFTFNWGAFTVAIVLQVVTGLFGITLSYHRNLTHRSFKLPK 393
           F   +  H +CLFAPF FNW AF V++ L VVTGLFGIT S+HRNL+HRSFKLPK
Sbjct: 122 FVIVLSMHLLCLFAPFNFNWPAFWVSVALYVVTGLFGITTSFHRNLSHRSFKLPK 176


>ref|NP_001237468.1| uncharacterized protein LOC100527024 [Glycine max]
           gi|255631388|gb|ACU16061.1| unknown [Glycine max]
          Length = 229

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 35/48 (72%), Positives = 42/48 (87%)
 Frame = +1

Query: 250 HTMCLFAPFTFNWGAFTVAIVLQVVTGLFGITLSYHRNLTHRSFKLPK 393
           H +C+FAPF FNW AF VA+ L +VTGLFG+TLS+HRNL+HRSFKLPK
Sbjct: 128 HLLCVFAPFHFNWPAFWVAVALYIVTGLFGVTLSFHRNLSHRSFKLPK 175


>ref|XP_004152343.1| PREDICTED: palmitoyl-monogalactosyldiacylglycerol delta-7
           desaturase, chloroplastic-like [Cucumis sativus]
           gi|449515933|ref|XP_004165002.1| PREDICTED:
           palmitoyl-monogalactosyldiacylglycerol delta-7
           desaturase, chloroplastic-like [Cucumis sativus]
          Length = 317

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 41/94 (43%), Positives = 59/94 (62%)
 Frame = +1

Query: 112 LNYLKYEQSEKIRFMEVTSKSLPYVLNEKMEVPQTLSVVFYSAVVSHTMCLFAPFTFNWG 291
           ++ LK E  +  +  ++T     +   +K++    LS         H +C+FAPF FNW 
Sbjct: 14  MDTLKEESKKMGKVHQMTFGRRKWTNGDKLKASLILSF--------HVLCIFAPFHFNWS 65

Query: 292 AFTVAIVLQVVTGLFGITLSYHRNLTHRSFKLPK 393
           AF VA VL ++TGLFGI++SYHRNL+H+SFKLPK
Sbjct: 66  AFWVAFVLYILTGLFGISISYHRNLSHKSFKLPK 99


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