BLASTX nr result

ID: Coptis25_contig00029732 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029732
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265446.1| PREDICTED: uncharacterized protein LOC100256...    79   3e-13
emb|CAN60849.1| hypothetical protein VITISV_023571 [Vitis vinife...    79   3e-13
gb|AAM65300.1| unknown [Arabidopsis thaliana]                          71   8e-11
ref|NP_198382.1| uncharacterized protein [Arabidopsis thaliana] ...    71   8e-11
ref|XP_004163013.1| PREDICTED: uncharacterized protein LOC101228...    69   3e-10

>ref|XP_002265446.1| PREDICTED: uncharacterized protein LOC100256672 [Vitis vinifera]
          Length = 277

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/42 (92%), Positives = 41/42 (97%)
 Frame = +2

Query: 134 SLKMKRKELEDVYDDFSDFSLSSPARKIRRLDADLPPIMEEE 259
           SLKMKRKELE+V DDFSDFSLSSPARKIRRLDA+LPPIMEEE
Sbjct: 6   SLKMKRKELEEVNDDFSDFSLSSPARKIRRLDAELPPIMEEE 47


>emb|CAN60849.1| hypothetical protein VITISV_023571 [Vitis vinifera]
           gi|296090470|emb|CBI40666.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/42 (92%), Positives = 41/42 (97%)
 Frame = +2

Query: 134 SLKMKRKELEDVYDDFSDFSLSSPARKIRRLDADLPPIMEEE 259
           SLKMKRKELE+V DDFSDFSLSSPARKIRRLDA+LPPIMEEE
Sbjct: 6   SLKMKRKELEEVNDDFSDFSLSSPARKIRRLDAELPPIMEEE 47


>gb|AAM65300.1| unknown [Arabidopsis thaliana]
          Length = 225

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/41 (82%), Positives = 37/41 (90%)
 Frame = +2

Query: 137 LKMKRKELEDVYDDFSDFSLSSPARKIRRLDADLPPIMEEE 259
           L MKRK+++ V DDFSDFSLSSPARKIRRLD DLPPIMEEE
Sbjct: 7   LSMKRKDIDRVNDDFSDFSLSSPARKIRRLDVDLPPIMEEE 47


>ref|NP_198382.1| uncharacterized protein [Arabidopsis thaliana]
           gi|3047092|gb|AAC13604.1| T26D22.2 gene product
           [Arabidopsis thaliana] gi|10178092|dbj|BAB11479.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|18377775|gb|AAL67037.1| unknown protein [Arabidopsis
           thaliana] gi|21436067|gb|AAM51234.1| unknown protein
           [Arabidopsis thaliana] gi|332006568|gb|AED93951.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 225

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/41 (82%), Positives = 37/41 (90%)
 Frame = +2

Query: 137 LKMKRKELEDVYDDFSDFSLSSPARKIRRLDADLPPIMEEE 259
           L MKRK+++ V DDFSDFSLSSPARKIRRLD DLPPIMEEE
Sbjct: 7   LSMKRKDIDRVNDDFSDFSLSSPARKIRRLDVDLPPIMEEE 47


>ref|XP_004163013.1| PREDICTED: uncharacterized protein LOC101228135 [Cucumis sativus]
          Length = 249

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/41 (78%), Positives = 37/41 (90%)
 Frame = +2

Query: 137 LKMKRKELEDVYDDFSDFSLSSPARKIRRLDADLPPIMEEE 259
           +KMKRK+L+ + DDFSDFSLSSPARKIRRLD  LPPI+EEE
Sbjct: 3   MKMKRKDLDQINDDFSDFSLSSPARKIRRLDVGLPPIIEEE 43


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