BLASTX nr result

ID: Coptis25_contig00029717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029717
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280024.1| PREDICTED: isocitrate lyase-like [Vitis vini...   258   5e-67
sp|P17069.1|ACEA_GOSHI RecName: Full=Isocitrate lyase; Short=ICL...   246   1e-63
ref|NP_001233878.1| isocitrate lyase [Solanum lycopersicum] gi|1...   242   3e-62
gb|AAG44479.1|AF243525_1 isocitrate lyase [Ipomoea batatas]           241   6e-62
ref|XP_002529741.1| isocitrate lyase, putative [Ricinus communis...   240   1e-61

>ref|XP_002280024.1| PREDICTED: isocitrate lyase-like [Vitis vinifera]
          Length = 576

 Score =  258 bits (658), Expect = 5e-67
 Identities = 122/143 (85%), Positives = 133/143 (93%)
 Frame = +3

Query: 6   AVGATLIQTNVDTRDHQFILGATNPNLKGKGIATLLAEAMEAGKTGAELQAIEDHWISMA 185
           AV A LIQTNVDTRDHQFILGATNPNLKGKG+AT+LAEAM AGKTGAELQAIED+W+S+A
Sbjct: 253 AVAANLIQTNVDTRDHQFILGATNPNLKGKGLATILAEAMAAGKTGAELQAIEDNWLSVA 312

Query: 186 QLKTFSNCVVDAIKKMNLGEDEKRRRMNEWMNHSGYDKCLSNDQCREIADRLGLTNLFWD 365
           QLKTFS CVVDAI  +N+ EDEKRRR+NEWMNHSGYDKCLSNDQ REIA+RLGL NLFWD
Sbjct: 313 QLKTFSECVVDAINNLNIREDEKRRRLNEWMNHSGYDKCLSNDQGREIAERLGLRNLFWD 372

Query: 366 WDLPRTREGLYRFEGSVMAAVVR 434
           WDLPRTREG YRF+GSVMAA+VR
Sbjct: 373 WDLPRTREGFYRFKGSVMAAIVR 395


>sp|P17069.1|ACEA_GOSHI RecName: Full=Isocitrate lyase; Short=ICL; Short=Isocitrase;
           Short=Isocitratase gi|18486|emb|CAA36381.1| unnamed
           protein product [Gossypium hirsutum]
          Length = 576

 Score =  246 bits (629), Expect = 1e-63
 Identities = 115/143 (80%), Positives = 128/143 (89%)
 Frame = +3

Query: 6   AVGATLIQTNVDTRDHQFILGATNPNLKGKGIATLLAEAMEAGKTGAELQAIEDHWISMA 185
           AV ATLIQTNVDTRDHQFILGATNPNL+GK +A +LAE M AGK G +LQAIED+W+++A
Sbjct: 253 AVAATLIQTNVDTRDHQFILGATNPNLRGKSLANMLAEGMAAGKNGPQLQAIEDNWLAIA 312

Query: 186 QLKTFSNCVVDAIKKMNLGEDEKRRRMNEWMNHSGYDKCLSNDQCREIADRLGLTNLFWD 365
           QLKTFS CV+DAIK MN+ EDEKRRRMNEWMNHS YDKCLSN+Q REIA+RLGL NLFWD
Sbjct: 313 QLKTFSECVMDAIKSMNITEDEKRRRMNEWMNHSSYDKCLSNEQAREIAERLGLQNLFWD 372

Query: 366 WDLPRTREGLYRFEGSVMAAVVR 434
           WDLPRTREG YRF GSVMAA+VR
Sbjct: 373 WDLPRTREGFYRFRGSVMAAIVR 395


>ref|NP_001233878.1| isocitrate lyase [Solanum lycopersicum]
           gi|1351841|sp|P49297.1|ACEA_SOLLC RecName:
           Full=Isocitrate lyase; Short=ICL; Short=Isocitrase;
           Short=Isocitratase gi|624211|gb|AAA82738.1| isocitrate
           lyase [Solanum lycopersicum]
          Length = 575

 Score =  242 bits (617), Expect = 3e-62
 Identities = 113/143 (79%), Positives = 129/143 (90%)
 Frame = +3

Query: 6   AVGATLIQTNVDTRDHQFILGATNPNLKGKGIATLLAEAMEAGKTGAELQAIEDHWISMA 185
           AV ATLIQTNVDTRDHQFILGA+NPNLKGKG+AT L+EAM AGKTG ELQAIED+W+ MA
Sbjct: 253 AVAATLIQTNVDTRDHQFILGASNPNLKGKGLATHLSEAMAAGKTGPELQAIEDNWLGMA 312

Query: 186 QLKTFSNCVVDAIKKMNLGEDEKRRRMNEWMNHSGYDKCLSNDQCREIADRLGLTNLFWD 365
           +LKTFS CV DAIKKMNL E EK+R++NEWMNHS Y+KCLS++Q RE+A+RLGL NLFWD
Sbjct: 313 ELKTFSQCVTDAIKKMNLAEYEKQRKLNEWMNHSSYEKCLSHEQAREVAERLGLPNLFWD 372

Query: 366 WDLPRTREGLYRFEGSVMAAVVR 434
           WDLPRTREG YRF+GSV AA+VR
Sbjct: 373 WDLPRTREGFYRFQGSVEAAIVR 395


>gb|AAG44479.1|AF243525_1 isocitrate lyase [Ipomoea batatas]
          Length = 575

 Score =  241 bits (614), Expect = 6e-62
 Identities = 113/143 (79%), Positives = 128/143 (89%)
 Frame = +3

Query: 6   AVGATLIQTNVDTRDHQFILGATNPNLKGKGIATLLAEAMEAGKTGAELQAIEDHWISMA 185
           AV ATLIQTNVDTRDHQFILG TNPNLKGKG+AT+L+EAM AGKTG ELQAIED+WI+MA
Sbjct: 253 AVAATLIQTNVDTRDHQFILGVTNPNLKGKGLATILSEAMAAGKTGLELQAIEDNWIAMA 312

Query: 186 QLKTFSNCVVDAIKKMNLGEDEKRRRMNEWMNHSGYDKCLSNDQCREIADRLGLTNLFWD 365
           +LKTFS  VVDAI ++N+GE EK+RR+NEWM HS Y+KCLSN Q REIA+ LGL NLFWD
Sbjct: 313 ELKTFSETVVDAINRLNIGEPEKQRRLNEWMKHSSYEKCLSNFQAREIAENLGLNNLFWD 372

Query: 366 WDLPRTREGLYRFEGSVMAAVVR 434
           WDLPRTREG YRF+GSVMAA+VR
Sbjct: 373 WDLPRTREGFYRFKGSVMAAIVR 395


>ref|XP_002529741.1| isocitrate lyase, putative [Ricinus communis]
           gi|223530782|gb|EEF32648.1| isocitrate lyase, putative
           [Ricinus communis]
          Length = 576

 Score =  240 bits (612), Expect = 1e-61
 Identities = 114/143 (79%), Positives = 125/143 (87%)
 Frame = +3

Query: 6   AVGATLIQTNVDTRDHQFILGATNPNLKGKGIATLLAEAMEAGKTGAELQAIEDHWISMA 185
           A  A LIQ+NVDTRDHQFILG TNPNL+GK +ATLLA  M  GKTGAELQAIED+W++MA
Sbjct: 253 AEAANLIQSNVDTRDHQFILGVTNPNLRGKSLATLLATGMANGKTGAELQAIEDNWLAMA 312

Query: 186 QLKTFSNCVVDAIKKMNLGEDEKRRRMNEWMNHSGYDKCLSNDQCREIADRLGLTNLFWD 365
           QLKTF  CV+DAIK MN GEDEKRRRMNEWMNH+ YDKCLS +Q REIADR+GL NLFWD
Sbjct: 313 QLKTFPECVMDAIKNMNAGEDEKRRRMNEWMNHTSYDKCLSYEQGREIADRMGLKNLFWD 372

Query: 366 WDLPRTREGLYRFEGSVMAAVVR 434
           WDLPRTREG YRF+GSVMAAVVR
Sbjct: 373 WDLPRTREGFYRFKGSVMAAVVR 395


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