BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029710
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279149.2| PREDICTED: pentatricopeptide repeat-containi...   154   7e-36
emb|CBI19926.3| unnamed protein product [Vitis vinifera]              154   7e-36
emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]   152   4e-35
ref|XP_002306667.1| predicted protein [Populus trichocarpa] gi|2...   121   5e-26
ref|XP_003522561.1| PREDICTED: pentatricopeptide repeat-containi...   121   7e-26

>ref|XP_002279149.2| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
           mitochondrial-like [Vitis vinifera]
          Length = 665

 Score =  154 bits (389), Expect = 7e-36
 Identities = 77/122 (63%), Positives = 93/122 (76%)
 Frame = +3

Query: 3   CLVDMMCRMDKLTEAMEIVERMHEEPNVGIWTSLLLACVTNQNLELTERIAERVMELEPH 182
           C+VDMM R  KL EAM+IVE M  EP+  IW SLL AC    +L  TER+AERVMELEP 
Sbjct: 511 CIVDMMSRGGKLKEAMDIVELMPHEPSGLIWGSLLCACEIYGDLRFTERVAERVMELEPQ 570

Query: 183 SSLPYLVLAQAYEMKCRWESVARIRKAMQDRGIRKVTDHSWIGIKNRVFAFKGNPVLYCG 362
           SSLPYLVLAQAYEM+ RWES+ R+R+AM+++G+RKV   SWIGIKN VF FK N +L+ G
Sbjct: 571 SSLPYLVLAQAYEMRGRWESLVRVRRAMKEKGVRKVIGCSWIGIKNHVFVFKENQLLHIG 630

Query: 363 SE 368
            +
Sbjct: 631 GK 632


>emb|CBI19926.3| unnamed protein product [Vitis vinifera]
          Length = 486

 Score =  154 bits (389), Expect = 7e-36
 Identities = 77/122 (63%), Positives = 93/122 (76%)
 Frame = +3

Query: 3   CLVDMMCRMDKLTEAMEIVERMHEEPNVGIWTSLLLACVTNQNLELTERIAERVMELEPH 182
           C+VDMM R  KL EAM+IVE M  EP+  IW SLL AC    +L  TER+AERVMELEP 
Sbjct: 258 CIVDMMSRGGKLKEAMDIVELMPHEPSGLIWGSLLCACEIYGDLRFTERVAERVMELEPQ 317

Query: 183 SSLPYLVLAQAYEMKCRWESVARIRKAMQDRGIRKVTDHSWIGIKNRVFAFKGNPVLYCG 362
           SSLPYLVLAQAYEM+ RWES+ R+R+AM+++G+RKV   SWIGIKN VF FK N +L+ G
Sbjct: 318 SSLPYLVLAQAYEMRGRWESLVRVRRAMKEKGVRKVIGCSWIGIKNHVFVFKENQLLHIG 377

Query: 363 SE 368
            +
Sbjct: 378 GK 379


>emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
          Length = 1796

 Score =  152 bits (383), Expect = 4e-35
 Identities = 76/122 (62%), Positives = 92/122 (75%)
 Frame = +3

Query: 3    CLVDMMCRMDKLTEAMEIVERMHEEPNVGIWTSLLLACVTNQNLELTERIAERVMELEPH 182
            C+VDMM R  KL EAM+IVE M  EP+  IW SLL AC    +L  TER+AERVMELEP 
Sbjct: 1184 CIVDMMSRGGKLKEAMDIVELMPHEPSGLIWGSLLCACEIYGDLRFTERVAERVMELEPQ 1243

Query: 183  SSLPYLVLAQAYEMKCRWESVARIRKAMQDRGIRKVTDHSWIGIKNRVFAFKGNPVLYCG 362
            SSLPYLVLAQAYEM+ RWES+ R+ +AM+++G+RKV   SWIGIKN VF FK N +L+ G
Sbjct: 1244 SSLPYLVLAQAYEMRGRWESLVRVXRAMKEKGVRKVIGCSWIGIKNHVFVFKENQLLHIG 1303

Query: 363  SE 368
             +
Sbjct: 1304 GK 1305



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/103 (33%), Positives = 60/103 (58%)
 Frame = +3

Query: 3   CLVDMMCRMDKLTEAMEIVERMHEEPNVGIWTSLLLACVTNQNLELTERIAERVMELEPH 182
           C+VD+  R   L +AM ++E+M  + +  +W+S+L  CV + N  L +++A+R+++L+P 
Sbjct: 579 CMVDLYARAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVAHGNNILGKKVAKRIIDLDPE 638

Query: 183 SSLPYLVLAQAYEMKCRWESVARIRKAMQDRGIRKVTDHSWIG 311
           +S  Y+ L+  Y     W   A++RK M D+ I K T     G
Sbjct: 639 NSGAYVQLSGIYATFEDWGRSAQVRKLMYDKKIPKDTSFDIAG 681


>ref|XP_002306667.1| predicted protein [Populus trichocarpa] gi|222856116|gb|EEE93663.1|
           predicted protein [Populus trichocarpa]
          Length = 630

 Score =  121 bits (304), Expect = 5e-26
 Identities = 56/111 (50%), Positives = 82/111 (73%)
 Frame = +3

Query: 3   CLVDMMCRMDKLTEAMEIVERMHEEPNVGIWTSLLLACVTNQNLELTERIAERVMELEPH 182
           C VD++C+  +L EA+ + E M  EP   IW S+L AC+ + +L+L+ER+AER+MELEP 
Sbjct: 489 CFVDLLCQAGRLDEALYVAESMPYEPVSLIWESILHACLIHGDLKLSERVAERLMELEPQ 548

Query: 183 SSLPYLVLAQAYEMKCRWESVARIRKAMQDRGIRKVTDHSWIGIKNRVFAF 335
           SSLPYLVLA+ +E++ +WE V R++KAM+   + KV   SWIG+KN+V+ F
Sbjct: 549 SSLPYLVLARMFEIRGQWEGVVRVKKAMKRGKVEKVIGCSWIGVKNQVYTF 599


>ref|XP_003522561.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
           mitochondrial-like [Glycine max]
          Length = 630

 Score =  121 bits (303), Expect = 7e-26
 Identities = 54/122 (44%), Positives = 84/122 (68%)
 Frame = +3

Query: 3   CLVDMMCRMDKLTEAMEIVERMHEEPNVGIWTSLLLACVTNQNLELTERIAERVMELEPH 182
           C+V+M+C+  KL EA++I+E M       IW S+  AC    +L++ E +A+++M++E  
Sbjct: 490 CVVEMLCKAGKLKEAIDIIETMPYRTTSDIWRSIFSACAIYGDLQIIEGVAKKIMDMESL 549

Query: 183 SSLPYLVLAQAYEMKCRWESVARIRKAMQDRGIRKVTDHSWIGIKNRVFAFKGNPVLYCG 362
            SLPYLVLAQAY+M+ RW+S+ R+RKA ++RG ++   HSWIGIKN V+ F  N + + G
Sbjct: 550 ISLPYLVLAQAYQMRGRWDSMVRMRKAAENRGSKEFIGHSWIGIKNNVYTFASNQLQHYG 609

Query: 363 SE 368
            +
Sbjct: 610 GK 611