BLASTX nr result

ID: Coptis25_contig00029702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029702
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278511.1| PREDICTED: protein sym-1 [Vitis vinifera] gi...   209   2e-52
ref|XP_002308859.1| predicted protein [Populus trichocarpa] gi|2...   204   5e-51
ref|XP_002323213.1| predicted protein [Populus trichocarpa] gi|2...   203   1e-50
ref|XP_004170981.1| PREDICTED: protein Mpv17-like, partial [Cucu...   195   3e-48
ref|XP_004136622.1| PREDICTED: protein SYM1-like [Cucumis sativus]    195   3e-48

>ref|XP_002278511.1| PREDICTED: protein sym-1 [Vitis vinifera]
           gi|297741716|emb|CBI32848.3| unnamed protein product
           [Vitis vinifera]
          Length = 293

 Score =  209 bits (532), Expect = 2e-52
 Identities = 101/118 (85%), Positives = 106/118 (89%)
 Frame = -3

Query: 497 VGPTLHFWYLSLSKMVATLGASGAFLRLLLDQFLFSPIFIGFFLCTLLTLEGRPSQIVPK 318
           VGPTLHFWYL LSK+V   GASGAFLRLLLDQFLFSPIFIG FL TL+TLEGRPSQ+VPK
Sbjct: 176 VGPTLHFWYLYLSKLVTIPGASGAFLRLLLDQFLFSPIFIGVFLSTLVTLEGRPSQVVPK 235

Query: 317 LQQEWLATVLANWQLWIPFQFLNFLFVPQQFQVLAANFIALTWNVILSFKAHKEILSK 144
           LQQEW + VLANWQLWIPFQFLNF FVPQQFQVLAAN +AL WNVILSFKAHKEIL K
Sbjct: 236 LQQEWFSAVLANWQLWIPFQFLNFRFVPQQFQVLAANVVALAWNVILSFKAHKEILPK 293


>ref|XP_002308859.1| predicted protein [Populus trichocarpa] gi|222854835|gb|EEE92382.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  204 bits (520), Expect = 5e-51
 Identities = 97/118 (82%), Positives = 106/118 (89%)
 Frame = -3

Query: 497 VGPTLHFWYLSLSKMVATLGASGAFLRLLLDQFLFSPIFIGFFLCTLLTLEGRPSQIVPK 318
           VGPTLHFWYL LSK+V   GASGAFLRLL+DQF+FSPIFIG FL TL+TLEGRPS+++PK
Sbjct: 169 VGPTLHFWYLYLSKLVTLPGASGAFLRLLVDQFVFSPIFIGVFLSTLVTLEGRPSEVLPK 228

Query: 317 LQQEWLATVLANWQLWIPFQFLNFLFVPQQFQVLAANFIALTWNVILSFKAHKEILSK 144
           LQQEW + VLANWQLWIPFQFLNF FVPQQFQVLAAN IAL WNVILSFKAHKE+L K
Sbjct: 229 LQQEWFSAVLANWQLWIPFQFLNFRFVPQQFQVLAANVIALVWNVILSFKAHKEVLPK 286


>ref|XP_002323213.1| predicted protein [Populus trichocarpa] gi|222867843|gb|EEF04974.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score =  203 bits (517), Expect = 1e-50
 Identities = 97/118 (82%), Positives = 104/118 (88%)
 Frame = -3

Query: 497 VGPTLHFWYLSLSKMVATLGASGAFLRLLLDQFLFSPIFIGFFLCTLLTLEGRPSQIVPK 318
           VGPTLH WYL LSKMV   GASGAFLRLL DQF+FSPIFIG FL TL+TLEGRPSQ++PK
Sbjct: 147 VGPTLHIWYLYLSKMVTVPGASGAFLRLLADQFVFSPIFIGVFLSTLVTLEGRPSQVIPK 206

Query: 317 LQQEWLATVLANWQLWIPFQFLNFLFVPQQFQVLAANFIALTWNVILSFKAHKEILSK 144
           L+QEW + VLANWQLWIPFQFLNF FVPQQFQVLAAN IAL WNVILSFKAHKE+L K
Sbjct: 207 LKQEWFSAVLANWQLWIPFQFLNFRFVPQQFQVLAANVIALVWNVILSFKAHKEVLPK 264


>ref|XP_004170981.1| PREDICTED: protein Mpv17-like, partial [Cucumis sativus]
          Length = 171

 Score =  195 bits (496), Expect = 3e-48
 Identities = 90/118 (76%), Positives = 105/118 (88%)
 Frame = -3

Query: 497 VGPTLHFWYLSLSKMVATLGASGAFLRLLLDQFLFSPIFIGFFLCTLLTLEGRPSQIVPK 318
           VGP LHFWYL LS++V   GASGAF+RLLLDQF+F+P+FIG FL  LLTLEGRPS I+PK
Sbjct: 54  VGPALHFWYLYLSQLVTLPGASGAFVRLLLDQFIFTPVFIGVFLSGLLTLEGRPSDIIPK 113

Query: 317 LQQEWLATVLANWQLWIPFQFLNFLFVPQQFQVLAANFIALTWNVILSFKAHKEILSK 144
           LQQEW ++V+ANW+LWIPFQFLNF FVPQQFQVLAAN +AL WNVILSFKAHKEI+++
Sbjct: 114 LQQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANILALAWNVILSFKAHKEIITR 171


>ref|XP_004136622.1| PREDICTED: protein SYM1-like [Cucumis sativus]
          Length = 297

 Score =  195 bits (496), Expect = 3e-48
 Identities = 90/118 (76%), Positives = 105/118 (88%)
 Frame = -3

Query: 497 VGPTLHFWYLSLSKMVATLGASGAFLRLLLDQFLFSPIFIGFFLCTLLTLEGRPSQIVPK 318
           VGP LHFWYL LS++V   GASGAF+RLLLDQF+F+P+FIG FL  LLTLEGRPS I+PK
Sbjct: 180 VGPALHFWYLYLSQLVTLPGASGAFVRLLLDQFIFTPVFIGVFLSGLLTLEGRPSDIIPK 239

Query: 317 LQQEWLATVLANWQLWIPFQFLNFLFVPQQFQVLAANFIALTWNVILSFKAHKEILSK 144
           LQQEW ++V+ANW+LWIPFQFLNF FVPQQFQVLAAN +AL WNVILSFKAHKEI+++
Sbjct: 240 LQQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANILALAWNVILSFKAHKEIITR 297


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