BLASTX nr result

ID: Coptis25_contig00029689 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029689
         (1440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25882.1| unknown [Picea sitchensis]                             104   5e-20
ref|XP_002267796.1| PREDICTED: uncharacterized protein LOC100246...    97   1e-17
ref|XP_004139631.1| PREDICTED: uncharacterized protein LOC101202...    94   7e-17
ref|XP_002447691.1| hypothetical protein SORBIDRAFT_06g013230 [S...    91   8e-16
gb|AFK46140.1| unknown [Medicago truncatula]                           90   1e-15

>gb|ABK25882.1| unknown [Picea sitchensis]
          Length = 217

 Score =  104 bits (260), Expect = 5e-20
 Identities = 81/226 (35%), Positives = 116/226 (51%), Gaps = 2/226 (0%)
 Frame = +3

Query: 411  KRRSVKDRLGSVVEFGSDSFFGQQQHALKRQRQDTSTRNHIVTDHKVQEEIIVRKVVPET 590
            ++RSVK+RLG   +   DS         KRQR       H + D + + E+      P  
Sbjct: 11   RKRSVKERLGITAD---DSPTYAAHTTAKRQRPSDEKWKHDLYDDEEEGEL------PRV 61

Query: 591  L--KSVVFQTRLPPIVMREKTVNMSKGQGINARSVGISDIKATSKSPARFSDVSNVKEMC 764
               K+ V   R   + +++K    S   G +++  G+ D++     P + S  +N +   
Sbjct: 62   SNGKTGVQDLR---VKLQQKNSYRSSPSGNDSQG-GVRDLREKLSGPIQ-SRPANTE--- 113

Query: 765  TSQLKVSCPRSISETKANSGVGLVSSKMPMILSKSASYTTEQKKWHLVEDLDIPSFLQVL 944
                  +  R++S  K +S    V +  PM+    A   T QK+    E+  + S LQ L
Sbjct: 114  ------AARRTVSVMKGSSASKPVPASKPMVPPVPAPSKTIQKQTPPAEERSVASLLQSL 167

Query: 945  GLSKYLITFKVEEVDMFALKHMNDDDLKAIGLPMGPRKKILLALAS 1082
            GL KYLITF+ EEVDM AL+HM DDDLKA+G+PMGPRKKILLAL S
Sbjct: 168  GLGKYLITFQAEEVDMTALRHMGDDDLKALGIPMGPRKKILLALDS 213


>ref|XP_002267796.1| PREDICTED: uncharacterized protein LOC100246803 [Vitis vinifera]
            gi|296081056|emb|CBI18337.3| unnamed protein product
            [Vitis vinifera]
          Length = 211

 Score = 96.7 bits (239), Expect = 1e-17
 Identities = 78/232 (33%), Positives = 107/232 (46%)
 Frame = +3

Query: 387  YEFRSHGIKRRSVKDRLGSVVEFGSDSFFGQQQHALKRQRQDTSTRNHIVTDHKVQEEII 566
            Y  R     +RSV +RL        D    ++Q   KRQRQD     H + +   + +I 
Sbjct: 2    YADRVEAGAKRSVYERLNGT---SLDDSGRRRQFTGKRQRQDDDKWEHDLYEDG-ETQIS 57

Query: 567  VRKVVPETLKSVVFQTRLPPIVMREKTVNMSKGQGINARSVGISDIKATSKSPARFSDVS 746
             RKV    L+          + +++K        G  + S G+ D++           V+
Sbjct: 58   NRKVGARDLR----------LKLQKKVGQQVPLSGKGSLSGGVRDLREKLSGTMHSQPVN 107

Query: 747  NVKEMCTSQLKVSCPRSISETKANSGVGLVSSKMPMILSKSASYTTEQKKWHLVEDLDIP 926
            N        ++   P     T+ N  V    S    + S+     T+QK      D  + 
Sbjct: 108  NDPPKAKPAMEAGKP-----TRKNVAVEAPVSGTKKVASQVPRNKTQQKA-----DTSVD 157

Query: 927  SFLQVLGLSKYLITFKVEEVDMFALKHMNDDDLKAIGLPMGPRKKILLALAS 1082
             FLQ LGL KYLITF+ EEVDM AL HM D+DLKA+G+PMGPRKKILLAL S
Sbjct: 158  GFLQSLGLEKYLITFQAEEVDMTALIHMTDEDLKAMGIPMGPRKKILLALES 209


>ref|XP_004139631.1| PREDICTED: uncharacterized protein LOC101202907 [Cucumis sativus]
            gi|449475399|ref|XP_004154441.1| PREDICTED:
            uncharacterized LOC101202907 [Cucumis sativus]
          Length = 205

 Score = 94.4 bits (233), Expect = 7e-17
 Identities = 81/238 (34%), Positives = 108/238 (45%), Gaps = 6/238 (2%)
 Frame = +3

Query: 387  YEFRSHGIKRRSVKDRLGSVVEFGSDSFFGQQQHAL--KRQRQDTSTRNHIVTDHKVQEE 560
            Y  R      RS+KDRL      G+ S    ++  +  KRQR+D    + +  + + Q  
Sbjct: 2    YADRLEADNHRSIKDRLN-----GNSSDLSARRRPITGKRQREDDKWEHDLYENDEPQTS 56

Query: 561  IIVRKVVPETLKSVVFQTRLPPIVMREKTVNMSKGQGINARSVGISDIK----ATSKSPA 728
                              R+    +R K    S+ Q  NA   G+ D++     T K  A
Sbjct: 57   ----------------NRRVGARDLRLKLQKKSQQQSGNAPFSGVRDLREKLSGTMKPQA 100

Query: 729  RFSDVSNVKEMCTSQLKVSCPRSISETKANSGVGLVSSKMPMILSKSASYTTEQKKWHLV 908
              +D    K   T       PR       N  +   +S     ++KSA+    +KK    
Sbjct: 101  ANNDPPKPKLEVTK-----APRK------NDAIEAHTSSTQKAVAKSAT----RKKAAQK 145

Query: 909  EDLDIPSFLQVLGLSKYLITFKVEEVDMFALKHMNDDDLKAIGLPMGPRKKILLALAS 1082
             D  +  FLQ LGL KY ITF+ EEVDM AL HM DDDLKA+G+PMGPRKKILLAL S
Sbjct: 146  SDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMGDDDLKALGVPMGPRKKILLALES 203


>ref|XP_002447691.1| hypothetical protein SORBIDRAFT_06g013230 [Sorghum bicolor]
            gi|241938874|gb|EES12019.1| hypothetical protein
            SORBIDRAFT_06g013230 [Sorghum bicolor]
          Length = 211

 Score = 90.9 bits (224), Expect = 8e-16
 Identities = 77/227 (33%), Positives = 109/227 (48%), Gaps = 3/227 (1%)
 Frame = +3

Query: 411  KRRSVKDRLGSVVEFGSDSFFGQQQHAL-KRQRQDTSTRNHIVTDHKVQEEIIVRKVVPE 587
            ++RS+ DRL   +  G+ +  G+ +H + KRQRQ      H +  ++  +E   + + P+
Sbjct: 10   RKRSIHDRLDGDLPAGTGAG-GRVRHTVSKRQRQIDEKWKHDL--YREDDEPASKSIDPK 66

Query: 588  TLKSVVFQTRLPPIVMREKTVNMSKGQGINA-RSVGISDIKATSKSPARFSDVSNVKEMC 764
             L              R K    S  QG  + RS G+ D++           +S      
Sbjct: 67   DL--------------RLKLQRRSSQQGFTSTRSSGVRDLR---------EKLSGTMHPQ 103

Query: 765  TSQLKVSCPRSISETKANSGVGLVSSKMPMILSKSASYTTEQKKWHLVEDLD-IPSFLQV 941
             S       + +SE   N      + +MP   SK A   T  KK    +    + SFL  
Sbjct: 104  PSNADPPKRKPVSEV-VNISRRETADEMPARQSKKAPKQTSSKKTSQPKAASPLDSFLSS 162

Query: 942  LGLSKYLITFKVEEVDMFALKHMNDDDLKAIGLPMGPRKKILLALAS 1082
            LGL KY ITF+ EEVDM AL+HM D DLKA+G+PMGPRKKI+LAL S
Sbjct: 163  LGLEKYSITFQAEEVDMAALRHMTDSDLKALGIPMGPRKKIILALES 209


>gb|AFK46140.1| unknown [Medicago truncatula]
          Length = 206

 Score = 90.1 bits (222), Expect = 1e-15
 Identities = 82/234 (35%), Positives = 105/234 (44%), Gaps = 2/234 (0%)
 Frame = +3

Query: 387  YEFRSHGIKRRSVKDRLGSVVEFGSDSFFGQQQHALKRQRQDTSTRNHIVTDHKVQEE-- 560
            Y  R     RRSVK+RL   +   S S   Q+Q   KR RQD    + +  D   QE+  
Sbjct: 2    YADRVESGARRSVKERLDGSI---SVSTRNQRQVTGKRPRQDDKWEHDLYNDDVEQEQPR 58

Query: 561  IIVRKVVPETLKSVVFQTRLPPIVMREKTVNMSKGQGINARSVGISDIKATSKSPARFSD 740
               RKV  + L+  + +  L P                 A   G S   +T     R S 
Sbjct: 59   TTNRKVTGQDLRVKLQKKGLQP-----------------ATRSGKSSTPSTRDLRERLSG 101

Query: 741  VSNVKEMCTSQLKVSCPRSISETKANSGVGLVSSKMPMILSKSASYTTEQKKWHLVEDLD 920
              N      +Q K S P   S+  A      V ++ P +   +     + +K     D  
Sbjct: 102  TMN------TQPKNSDPPK-SKVIAKPSSKSVGAEAPAVKRPANPAPKKARKAGTTVD-- 152

Query: 921  IPSFLQVLGLSKYLITFKVEEVDMFALKHMNDDDLKAIGLPMGPRKKILLALAS 1082
               FL  LGL KY ITF+ EEVDM ALKHM D+DLK +G+PMGPRKKILLAL S
Sbjct: 153  --EFLLTLGLEKYFITFQAEEVDMTALKHMTDEDLKVMGIPMGPRKKILLALES 204


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