BLASTX nr result

ID: Coptis25_contig00029680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029680
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281286.1| PREDICTED: blue copper protein [Vitis vinife...   136   2e-30
ref|XP_002336036.1| predicted protein [Populus trichocarpa] gi|2...   131   5e-29
ref|XP_002334696.1| predicted protein [Populus trichocarpa] gi|2...   127   7e-28
ref|XP_002297929.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26
ref|XP_002511023.1| Blue copper protein precursor, putative [Ric...   118   4e-25

>ref|XP_002281286.1| PREDICTED: blue copper protein [Vitis vinifera]
           gi|297744981|emb|CBI38573.3| unnamed protein product
           [Vitis vinifera]
          Length = 182

 Score =  136 bits (342), Expect = 2e-30
 Identities = 78/167 (46%), Positives = 98/167 (58%), Gaps = 4/167 (2%)
 Frame = -2

Query: 497 LGLVLTCRATT-YTVXXXXXXXXXXXXXXXXXXXSFKAGDALLFQYSSIHSVDEVTKEDF 321
           LG  LTC A T YTV                    F  GD LLFQYSS +SV+EVT+E F
Sbjct: 14  LGFALTCSAATFYTVGDSSGWDISTDLDTWAKDKKFIVGDVLLFQYSSSNSVNEVTEESF 73

Query: 320 NGCNVTNPLSSSNSGNTTIALSAPGERYFTCGNGLHCLGGMKVKVNVQGGPANSPTSAP- 144
            GCN+T+ L +S++GNT+I L+ PGERYF CGN LHCLGGMK++VNVQ  PA SP  AP 
Sbjct: 74  KGCNMTDTLQTSSNGNTSIPLNRPGERYFVCGNKLHCLGGMKLQVNVQKDPAASPAGAPE 133

Query: 143 LSPGTXXXXXXXXXXXXNAV--SKGFIHGGWASLLACVAVSISLFIF 9
            S G+             A+  S GFI+GG  SLL+    S++  ++
Sbjct: 134 ASEGSLPRPSSKNNNPAAAIPDSTGFINGGMVSLLSAFLGSMATLLW 180


>ref|XP_002336036.1| predicted protein [Populus trichocarpa] gi|222839538|gb|EEE77875.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score =  131 bits (330), Expect = 5e-29
 Identities = 71/155 (45%), Positives = 90/155 (58%), Gaps = 4/155 (2%)
 Frame = -2

Query: 497 LGLVLTCRATTYTVXXXXXXXXXXXXXXXXXXXSFKAGDALLFQYSSIHSVDEVTKEDFN 318
           LGL +TC+A TY V                   +F  GD L+FQYSS HSVDEV KEDF+
Sbjct: 13  LGLAVTCKAATYMVGDNSGWDISTDIDTWAQDKTFAVGDVLMFQYSSSHSVDEVKKEDFD 72

Query: 317 GCNVTNPLSSSNSGNTTIALSAPGERYFTCGNGLHCLGGMKVKVNVQGGPANSPTSAPLS 138
            CN TN L +  +GNTT++L+ PG RYF CGN LHCLGGMK++VNV    A+SPT AP +
Sbjct: 73  SCNTTNVLRTFTTGNTTVSLTNPGTRYFVCGNKLHCLGGMKLQVNVASNQADSPTGAPQT 132

Query: 137 -PGTXXXXXXXXXXXXNAV---SKGFIHGGWASLL 45
            PG              +V   S G ++GG  S++
Sbjct: 133 HPGGNISQPSSKSNNPASVIPTSAGSVYGGRDSIV 167


>ref|XP_002334696.1| predicted protein [Populus trichocarpa] gi|222874530|gb|EEF11661.1|
           predicted protein [Populus trichocarpa]
          Length = 174

 Score =  127 bits (320), Expect = 7e-28
 Identities = 70/155 (45%), Positives = 88/155 (56%), Gaps = 4/155 (2%)
 Frame = -2

Query: 497 LGLVLTCRATTYTVXXXXXXXXXXXXXXXXXXXSFKAGDALLFQYSSIHSVDEVTKEDFN 318
           L   LTC+A TY V                   +F  GD L+FQYSS HSVDEV KEDF+
Sbjct: 4   LSNALTCKAATYMVGDNSGWDISTDIDTWAQDKTFAVGDVLMFQYSSSHSVDEVKKEDFD 63

Query: 317 GCNVTNPLSSSNSGNTTIALSAPGERYFTCGNGLHCLGGMKVKVNVQGGPANSPTSAPLS 138
            CN TN L +  +GNTT++L+ PG RYF CGN LHCLGGMK++VNV    A+SPT AP +
Sbjct: 64  SCNTTNVLRTFTTGNTTVSLTNPGTRYFVCGNKLHCLGGMKLQVNVASNQADSPTGAPQT 123

Query: 137 -PGTXXXXXXXXXXXXNAV---SKGFIHGGWASLL 45
            PG              +V   S G ++GG  S++
Sbjct: 124 HPGGNISQPSSKSNNPASVIPTSAGSVYGGRDSIV 158


>ref|XP_002297929.1| predicted protein [Populus trichocarpa] gi|222845187|gb|EEE82734.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score =  122 bits (306), Expect = 3e-26
 Identities = 60/118 (50%), Positives = 71/118 (60%)
 Frame = -2

Query: 497 LGLVLTCRATTYTVXXXXXXXXXXXXXXXXXXXSFKAGDALLFQYSSIHSVDEVTKEDFN 318
           LGL LTC A TY V                   +F  GD L FQYSS HS++EV KEDF+
Sbjct: 13  LGLALTCNAATYMVGDNSGWDISTDLDTWAQSKTFVVGDLLSFQYSSSHSLEEVKKEDFD 72

Query: 317 GCNVTNPLSSSNSGNTTIALSAPGERYFTCGNGLHCLGGMKVKVNVQGGPANSPTSAP 144
            CN TN   +  +GNTT+ L+ PG RYF CGN LHCLGGMK++VNV+   AN P  AP
Sbjct: 73  SCNTTNVARTFTNGNTTVPLTEPGTRYFVCGNQLHCLGGMKLQVNVEDNQANPPIGAP 130


>ref|XP_002511023.1| Blue copper protein precursor, putative [Ricinus communis]
           gi|223550138|gb|EEF51625.1| Blue copper protein
           precursor, putative [Ricinus communis]
          Length = 182

 Score =  118 bits (296), Expect = 4e-25
 Identities = 70/164 (42%), Positives = 88/164 (53%), Gaps = 3/164 (1%)
 Frame = -2

Query: 491 LVLTCRATTYTVXXXXXXXXXXXXXXXXXXXSFKAGDALLFQYSSIHSVDEVTKEDFNGC 312
           L LTC ATTY V                    F  GD LLFQY+S   V+EVTKE F+GC
Sbjct: 16  LALTCAATTYMVGDTSGWDISTDLPTWAHDKQFLVGDVLLFQYTSSEVVNEVTKEAFDGC 75

Query: 311 NVTNPLSSSNSGNTTIALSAPGERYFTCGNGLHCLGGMKVKVNVQGGPANSPTSAP-LSP 135
           N TN + +  +GNTT+ L+ PG  YF  GN L+CLGGMK++VNVQG  A+SP  AP   P
Sbjct: 76  NTTNVIRTYTNGNTTVTLTRPGAWYFISGNKLYCLGGMKLQVNVQGTQASSPVGAPQAQP 135

Query: 134 GTXXXXXXXXXXXXNAVSKGFI-HGGWASLL-ACVAVSISLFIF 9
           G                S GFI   G  SLL   + +S+++ +F
Sbjct: 136 GATLPQPSSKNNNPIPTSAGFIMRSGRDSLLQTSLGLSVAVLLF 179


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