BLASTX nr result

ID: Coptis25_contig00029679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029679
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago tr...    77   1e-12
ref|XP_002331231.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...    63   3e-08
ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...    61   8e-08

>gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago truncatula]
          Length = 814

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 34/87 (39%), Positives = 50/87 (57%)
 Frame = -1

Query: 263 WNVRGTNEVQKAKEINKMRIQKKLSAFCLLETKVRQDKCELMRNMCCPQWEHMNNYSRDP 84
           WNVRG N+  K KEI    ++ K     L+ET+++ DK   + +M   +W  +NNY    
Sbjct: 523 WNVRGCNKPFKQKEIKNFLLKNKFDMCILVETRIKADKFNKISSMIFKRWPVLNNYDSAA 582

Query: 83  SGRIWICWDPSILQFVKIIESDQYIHC 3
           +GRIW+ W+P++L    I  S Q IHC
Sbjct: 583 NGRIWVSWNPTVLDVKPIASSAQAIHC 609


>ref|XP_002331231.1| predicted protein [Populus trichocarpa] gi|222873417|gb|EEF10548.1|
           predicted protein [Populus trichocarpa]
          Length = 130

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/86 (32%), Positives = 47/86 (54%)
 Frame = -1

Query: 263 WNVRGTNEVQKAKEINKMRIQKKLSAFCLLETKVRQDKCELMRNMCCPQWEHMNNYSRDP 84
           WNVRG N+  K   + ++  Q++++ F L+ET+VR    + +  +    W  + NY    
Sbjct: 6   WNVRGLNDPIKHSALRRLIHQERITLFALVETRVRHKNKDNVSQLLLRNWSFLYNYDFSC 65

Query: 83  SGRIWICWDPSILQFVKIIESDQYIH 6
            GRIW+CW+   ++   +  SDQ IH
Sbjct: 66  RGRIWVCWNADTVKVDVLGMSDQAIH 91


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
 Frame = -1

Query: 272 ICV-WNVRGTNEVQKAKEINKMRIQKKLSAFCLLETKVRQDKCELMRNMCCPQWEHMNNY 96
           +CV WNVRG N+  K KEI       K+    LLET+VR+     ++      W+ +NNY
Sbjct: 2   LCVSWNVRGMNDPFKIKEIKNFLYSHKIVVCALLETRVREQNASKVQGKLGKDWKWLNNY 61

Query: 95  SRDPSGRIWICWDPSILQFVKIIESDQYIHC 3
           S     RIWI W P+ +        +Q + C
Sbjct: 62  SHSARERIWIGWRPAWVNVTLTHTQEQLMVC 92


>ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|222832345|gb|EEE70822.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 27/86 (31%), Positives = 47/86 (54%)
 Frame = -1

Query: 263 WNVRGTNEVQKAKEINKMRIQKKLSAFCLLETKVRQDKCELMRNMCCPQWEHMNNYSRDP 84
           WN+RG N+  K  E+ ++  Q++++ F L+ET+V+    + +  +    W  + NY    
Sbjct: 6   WNIRGLNDPIKHSELRRLIHQERIALFGLVETRVKDKNKDNVSQLLLRSWSFLYNYDFSC 65

Query: 83  SGRIWICWDPSILQFVKIIESDQYIH 6
            GRIW+CW+   ++      SDQ IH
Sbjct: 66  RGRIWVCWNADTVKVDVFGMSDQAIH 91


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/71 (39%), Positives = 39/71 (54%)
 Frame = -1

Query: 272 ICVWNVRGTNEVQKAKEINKMRIQKKLSAFCLLETKVRQDKCELMRNMCCPQWEHMNNYS 93
           I  WNVRG N+  K KE+      +K+S   L ET+VRQ     ++     +W  +NNY+
Sbjct: 3   ITTWNVRGLNDPIKVKEVKHFLHSQKISLCSLFETRVRQQNSGKIQKKFGNRWSWINNYA 62

Query: 92  RDPSGRIWICW 60
             P GRIW+ W
Sbjct: 63  CSPRGRIWVGW 73


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