BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029665
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABJ96383.1| hypothetical protein [Prunus persica]                  124   1e-28
emb|CAN67073.1| hypothetical protein VITISV_011746 [Vitis vinifera]   129   3e-28
emb|CCH50966.1| T4.5 [Malus x robusta]                                119   3e-27
gb|ABA94310.1| retrotransposon protein, putative, Ty3-gypsy subc...   124   1e-26
emb|CAB46043.1| retrotransposon like protein [Arabidopsis thalia...   122   3e-26

>gb|ABJ96383.1| hypothetical protein [Prunus persica]
          Length = 193

 Score =  124 bits (311), Expect(2) = 1e-28
 Identities = 55/111 (49%), Positives = 76/111 (68%)
 Frame = +1

Query: 13  RSKNGFIVFFGSNPISWSAKKQSTVSRSSTESEYRXXXXXXXXXYWLCLISQDLHLHLNA 192
           RS  GF ++ G N +SWSAKKQ TV+RSSTE+EYR          WL  + Q+L    + 
Sbjct: 53  RSTGGFAIYLGCNLVSWSAKKQHTVARSSTEAEYRAIANTSTEITWLRSLLQELGFSTST 112

Query: 193 SPTLWCDNIGALALASNPVFHARTKHIKVDYHYTRELVTSGALQLKIFSPK 345
           SP LWCDN+GA  L++NP+FHARTKH+++DYH+ R+ V++G L ++  S K
Sbjct: 113 SPVLWCDNLGATYLSANPIFHARTKHVEIDYHFVRDQVSAGKLSVQFISTK 163



 Score = 27.3 bits (59), Expect(2) = 1e-28
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3

Query: 330 DIFTEGLSSPRFYLLKSKLSIAAQS 404
           DI T+ LSSPRF  ++ KL +  +S
Sbjct: 168 DIMTKPLSSPRFTFIRDKLRVHERS 192


>emb|CAN67073.1| hypothetical protein VITISV_011746 [Vitis vinifera]
          Length = 879

 Score =  129 bits (324), Expect = 3e-28
 Identities = 60/100 (60%), Positives = 76/100 (76%)
 Frame = +1

Query: 13   RSKNGFIVFFGSNPISWSAKKQSTVSRSSTESEYRXXXXXXXXXYWLCLISQDLHLHLNA 192
            RS  G+ VFFGS  ISW+AKKQS V+RSSTE+EYR         YW+ ++ ++LH+ L  
Sbjct: 775  RSTTGYGVFFGSCLISWTAKKQSVVARSSTEAEYRALTITTAELYWIRMLLKELHISLPT 834

Query: 193  SPTLWCDNIGALALASNPVFHARTKHIKVDYHYTRELVTS 312
            +PT+WCDN GALALASNPVFHARTKHI+VD+H+ RE V +
Sbjct: 835  APTIWCDNSGALALASNPVFHARTKHIEVDFHFIREKVAN 874


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  119 bits (298), Expect(2) = 3e-27
 Identities = 56/101 (55%), Positives = 70/101 (69%)
 Frame = +1

Query: 13   RSKNGFIVFFGSNPISWSAKKQSTVSRSSTESEYRXXXXXXXXXYWLCLISQDLHLHLNA 192
            RS +G+ VF GSN ISWSAKKQ+TV+RSSTE+EYR          W+C I  D+   L  
Sbjct: 1513 RSTSGYCVFLGSNLISWSAKKQATVARSSTEAEYRSLANTAAEITWVCKILHDISFPLLK 1572

Query: 193  SPTLWCDNIGALALASNPVFHARTKHIKVDYHYTRELVTSG 315
            +P ++CDN   +ALA NPVFHARTKH+++DYHY RE V  G
Sbjct: 1573 TPVIYCDNKSVIALAFNPVFHARTKHVEIDYHYIREKVLLG 1613



 Score = 27.3 bits (59), Expect(2) = 3e-27
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = +3

Query: 330  DIFTEGLSSPRFYLLKSKLSIAAQS 404
            DIFT+ L++ RF  L SKLS+ + S
Sbjct: 1628 DIFTKPLAADRFAALTSKLSVRSPS 1652


>gb|ABA94310.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1762

 Score =  124 bits (310), Expect = 1e-26
 Identities = 54/111 (48%), Positives = 77/111 (69%)
 Frame = +1

Query: 13   RSKNGFIVFFGSNPISWSAKKQSTVSRSSTESEYRXXXXXXXXXYWLCLISQDLHLHLNA 192
            RS  GF+++FG N +SWSA+KQ TVSRSSTE+EY+          W+  + ++L + ++ 
Sbjct: 1624 RSTGGFVIYFGPNLVSWSARKQRTVSRSSTEAEYKAMANATAELIWVRSVLEELGVKIDQ 1683

Query: 193  SPTLWCDNIGALALASNPVFHARTKHIKVDYHYTRELVTSGALQLKIFSPK 345
            SP LWCDN+GA  L+SNPVFHARTKHI++DYH+ +E V +  L ++    K
Sbjct: 1684 SPVLWCDNLGATYLSSNPVFHARTKHIEIDYHFVQERVANKMLDIRFIGTK 1734


>emb|CAB46043.1| retrotransposon like protein [Arabidopsis thaliana]
            gi|7268438|emb|CAB80958.1| retrotransposon like protein
            [Arabidopsis thaliana]
          Length = 1474

 Score =  122 bits (306), Expect = 3e-26
 Identities = 54/110 (49%), Positives = 74/110 (67%)
 Frame = +1

Query: 16   SKNGFIVFFGSNPISWSAKKQSTVSRSSTESEYRXXXXXXXXXYWLCLISQDLHLHLNAS 195
            S N ++++ G NPISWS+KKQ  V+RSSTESEYR          WLC +   LH+ L   
Sbjct: 1334 STNAYVIYLGKNPISWSSKKQRGVARSSTESEYRAVANAASEVKWLCSLLSKLHIRLPIR 1393

Query: 196  PTLWCDNIGALALASNPVFHARTKHIKVDYHYTRELVTSGALQLKIFSPK 345
            P+++CDNIGA  L +NPVFH+R KHI +DYH+ R ++ SGAL++   S +
Sbjct: 1394 PSIFCDNIGATYLCANPVFHSRMKHIAIDYHFVRNMIQSGALRVSHVSTR 1443