BLASTX nr result
ID: Coptis25_contig00029656
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00029656
(2475 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containi... 699 0.0
emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera] 695 0.0
ref|NP_001045181.1| Os01g0914600 [Oryza sativa Japonica Group] g... 576 e-162
gb|EEC72021.1| hypothetical protein OsI_04901 [Oryza sativa Indi... 576 e-161
gb|EAZ14601.1| hypothetical protein OsJ_04525 [Oryza sativa Japo... 572 e-160
>ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein At3g29230-like
[Vitis vinifera] gi|297739328|emb|CBI28979.3| unnamed
protein product [Vitis vinifera]
Length = 585
Score = 699 bits (1805), Expect = 0.0
Identities = 336/562 (59%), Positives = 437/562 (77%), Gaps = 1/562 (0%)
Frame = -1
Query: 2400 TVSHILQIHAQLITTHLISDTFAVSRLIVATTS-TQQMNYAELVFMQIQKPHAFIYNSMI 2224
T S ILQIHAQLITT+LISDTFA SRL+ + S T +NYAELVF QI +P++FI N+M+
Sbjct: 23 TSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIHQPNSFICNTMV 82
Query: 2223 RGYVESLKPRNAFEFFSRMRREAVIGDSFTYPFVLKACGLMLGVKEGGEIHGEVVKNGFE 2044
+ Y ES P A F++ MRR+ ++GD++TYPFVLKACG M G+ EGG + GE VK GF
Sbjct: 83 KCYTESSTPERALRFYAEMRRKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVKRGFG 142
Query: 2043 LDLFVMNGLINMYCKCGEMVCAMRLFDGFKERDFVSWNTMIAGYIGYGKMDEAKNLFDGM 1864
D+FV+NGLI+MYC+CGE A +FDGF E+D VSWN+M+ GY+ G+M+ A+N+FD M
Sbjct: 143 GDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEM 202
Query: 1863 PERDLVSWTMMIDAYGKKFGYVARARELFNNMPKRDLVSWNSMISGYTHTGDMVLARELF 1684
PERD+VSW++MID YGKK G V RAR F++MP RDLVSWNSMI GY G+M +ARE+F
Sbjct: 203 PERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMIDGYAKVGEMEVAREIF 262
Query: 1683 EEMAEKNVISWSIMIDGYARHGHPTEALNLFQKMLFHGIRADKVSVVGAIQSCGELGALD 1504
++M +KNVISWSIMIDGYA+H EALNLF++ML GI+ D+VSVVGA+ +C +LGALD
Sbjct: 263 DKMLQKNVISWSIMIDGYAQHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALD 322
Query: 1503 QGRWIHVCVEKNDIICDVVVQTALLDMYMKCGRVNDAHRLFNSMLQKNFVSWNVMIVGLG 1324
QGRWIH+ +++N ++ D+VVQTAL+DMY+KCG ++A R+FNSM ++N VSWNVMIVGLG
Sbjct: 323 QGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSRDEARRIFNSMPERNVVSWNVMIVGLG 382
Query: 1323 MNGHGNEALKLFAQMREQGILMDDLTLLGILSACNHAGLVNEGLQIFVKMENTYGIEPKV 1144
MNG G EAL+ F QM + I MDDL LG+L AC+HA LV EGL IF +M+ Y +EPK+
Sbjct: 383 MNGFGKEALECFTQMEMERIPMDDLLFLGVLMACSHANLVTEGLHIFNQMKGVYRLEPKL 442
Query: 1143 EHYSCLVDLLSRAGRIREAKTVIETFPVKADSTLWGSLLAACRTTNNLVIAEVALERLVE 964
EHY CLVDLL RAG++ + + +I++ P+K ++ LWGSLL ACR N+ +AE+ +ERL E
Sbjct: 443 EHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACRIHQNVTLAEIVVERLAE 502
Query: 963 LKADDCGVYVLMSNIHAEKGMWEEVLSIRRLMTDRGMKKGTGRSVIEVDGAVHEFFNGDG 784
LKADD GVYVLMSNI+A+ GMWE +L IR+LM +R MKK GRSVIEVDG V EF +G+
Sbjct: 503 LKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKKDIGRSVIEVDGNVEEFVSGEK 562
Query: 783 TLFCMKGLDVVIWSLSKMLNFS 718
+ + +++VIWSL+KM F+
Sbjct: 563 SHILREEIELVIWSLAKMAMFA 584
>emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
Length = 585
Score = 695 bits (1794), Expect = 0.0
Identities = 334/562 (59%), Positives = 435/562 (77%), Gaps = 1/562 (0%)
Frame = -1
Query: 2400 TVSHILQIHAQLITTHLISDTFAVSRLIVATTS-TQQMNYAELVFMQIQKPHAFIYNSMI 2224
T S ILQIHAQLITT+LISDTFA SRL+ + S T +NYAELVF QI +P++FI N+M+
Sbjct: 23 TSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIHQPNSFICNTMV 82
Query: 2223 RGYVESLKPRNAFEFFSRMRREAVIGDSFTYPFVLKACGLMLGVKEGGEIHGEVVKNGFE 2044
+ Y ES P A F++ MR++ ++GD++TYPFVLKACG M G+ EGG + GE VK GF
Sbjct: 83 KCYTESSTPERALRFYAEMRKKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVKRGFG 142
Query: 2043 LDLFVMNGLINMYCKCGEMVCAMRLFDGFKERDFVSWNTMIAGYIGYGKMDEAKNLFDGM 1864
D+FV+NGLI+MYC+CGE A +FDGF E+D VSWN+M+ GY+ G+M+ A+N+FD M
Sbjct: 143 GDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEM 202
Query: 1863 PERDLVSWTMMIDAYGKKFGYVARARELFNNMPKRDLVSWNSMISGYTHTGDMVLARELF 1684
PERD+VSW++MID YGKK G V RAR F++MP RDLVSWNSMI GY G+M +ARE+F
Sbjct: 203 PERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMIDGYAKVGEMEVAREIF 262
Query: 1683 EEMAEKNVISWSIMIDGYARHGHPTEALNLFQKMLFHGIRADKVSVVGAIQSCGELGALD 1504
++M +KNVISWSIMIDGYA H EALNLF++ML GI+ D+VSVVGA+ +C +LGALD
Sbjct: 263 BKMLQKNVISWSIMIDGYAXHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALD 322
Query: 1503 QGRWIHVCVEKNDIICDVVVQTALLDMYMKCGRVNDAHRLFNSMLQKNFVSWNVMIVGLG 1324
QGRWIH+ +++N ++ D+VVQTAL+DMY+KCG ++A +FNSM ++N VSWNVMIVGLG
Sbjct: 323 QGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSXDEARXIFNSMPERNVVSWNVMIVGLG 382
Query: 1323 MNGHGNEALKLFAQMREQGILMDDLTLLGILSACNHAGLVNEGLQIFVKMENTYGIEPKV 1144
MNG G EAL+ F QM + I MDDL LG+L AC+HA LV EGL IF +M+ Y +EPK+
Sbjct: 383 MNGFGKEALECFXQMEMERIPMDDLLFLGVLMACSHANLVTEGLHIFNQMKGVYRLEPKL 442
Query: 1143 EHYSCLVDLLSRAGRIREAKTVIETFPVKADSTLWGSLLAACRTTNNLVIAEVALERLVE 964
EHY CLVDLL RAG++ + + +I++ P+K ++ LWGSLL ACR N+ +AE+ +ERL E
Sbjct: 443 EHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACRIHQNVTLAEIVVERLAE 502
Query: 963 LKADDCGVYVLMSNIHAEKGMWEEVLSIRRLMTDRGMKKGTGRSVIEVDGAVHEFFNGDG 784
LKADD GVYVLMSNI+A+ GMWE +L IR+LM +R MKK GRSVIEVDG V EF +G+
Sbjct: 503 LKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKKDIGRSVIEVDGNVEEFVSGEK 562
Query: 783 TLFCMKGLDVVIWSLSKMLNFS 718
+ + +++VIWSL+KM F+
Sbjct: 563 SHILREEIELVIWSLAKMAMFA 584
>ref|NP_001045181.1| Os01g0914600 [Oryza sativa Japonica Group]
gi|20804987|dbj|BAB92663.1| selenium-binding protein-like
[Oryza sativa Japonica Group]
gi|113534712|dbj|BAF07095.1| Os01g0914600 [Oryza sativa
Japonica Group]
Length = 589
Score = 576 bits (1485), Expect = e-162
Identities = 291/566 (51%), Positives = 398/566 (70%), Gaps = 9/566 (1%)
Frame = -1
Query: 2400 TVSHILQIHAQLITT-HLISDTFAVSRLIV-----ATTSTQQMNYAELVFMQIQKP---H 2248
+ SH LQ HA L+T+ HL + +S L++ A+ S ++A+ VF + + H
Sbjct: 22 SASHALQCHALLLTSGHLAASPARLSNLLLLALASASASPSAADHADSVFAHLAEEASRH 81
Query: 2247 AFIYNSMIRGYVESLKPRNAFEFFSRMRREAVIGDSFTYPFVLKACGLMLGVKEGGEIHG 2068
AF +N+++R + + PR + +FSRMRR AV D++T+P VLKACG G + G +HG
Sbjct: 82 AFPWNTLVRLHAAA-SPRRSLLYFSRMRRAAVAPDAYTFPAVLKACGCAPGCRVGLVVHG 140
Query: 2067 EVVKNGFELDLFVMNGLINMYCKCGEMVCAMRLFDGFKERDFVSWNTMIAGYIGYGKMDE 1888
E V+ G + DLF N LI+ YC+ G+ ++FD RD VSWN+M+AGY+G G++D
Sbjct: 141 EAVRTGLDADLFTRNALISFYCRIGDCRSGRKVFD-HGVRDLVSWNSMVAGYVGCGEVDL 199
Query: 1887 AKNLFDGMPERDLVSWTMMIDAYGKKFGYVARARELFNNMPKRDLVSWNSMISGYTHTGD 1708
A++LFD M +RD SW MID YG+ G V RARELF+ MP RDLV WNSMI GY G
Sbjct: 200 AQDLFDEMRQRDAFSWATMIDGYGEMAGGVDRARELFDQMPDRDLVCWNSMIDGYARHGR 259
Query: 1707 MVLARELFEEMAEKNVISWSIMIDGYARHGHPTEALNLFQKMLFHGIRADKVSVVGAIQS 1528
M AR LFEEM E+NVISWSI+IDGY R G P EAL FQ+ML GI+ D+V+ VGA+ +
Sbjct: 260 MDEARVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQRMLRCGIKPDRVAAVGAVAA 319
Query: 1527 CGELGALDQGRWIHVCVEKNDIICDVVVQTALLDMYMKCGRVNDAHRLFNSMLQKNFVSW 1348
C +LGAL+QGRW+H +EK ++ DVVVQTAL+DMY+KCGR++ A +F SM +K+ V+W
Sbjct: 320 CAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLDLAKLIFESMPKKSVVTW 379
Query: 1347 NVMIVGLGMNGHGNEALKLFAQMREQGILMDDLTLLGILSACNHAGLVNEGLQIFVKMEN 1168
NVMIVGLG +G+G +A+KLF QM + MDDL++L +L++C HAGLV+EGL IF +ME
Sbjct: 380 NVMIVGLGTHGYGLDAIKLFNQMETERAPMDDLSILAVLTSCTHAGLVSEGLGIFYRMEK 439
Query: 1167 TYGIEPKVEHYSCLVDLLSRAGRIREAKTVIETFPVKADSTLWGSLLAACRTTNNLVIAE 988
G+EPKVEHY L+DLL RAGR+ +A+ IET P++ LWGSLLA+CR+ + +AE
Sbjct: 440 DLGLEPKVEHYGALIDLLGRAGRVDQARNTIETMPMEPTPELWGSLLASCRSHRCVELAE 499
Query: 987 VALERLVELKADDCGVYVLMSNIHAEKGMWEEVLSIRRLMTDRGMKKGTGRSVIEVDGAV 808
+++ERL L ADD GVYVL+SNI+A++GMW++V IR+LM+ GMKK GRSVIEVDG +
Sbjct: 500 LSVERLASLGADDSGVYVLLSNIYADEGMWDDVFRIRKLMSAEGMKKNIGRSVIEVDGQI 559
Query: 807 HEFFNGDGTLFCMKGLDVVIWSLSKM 730
HEF NG + + + + +W+LS +
Sbjct: 560 HEFVNGGSSHPHKEEIYLTLWNLSNI 585
>gb|EEC72021.1| hypothetical protein OsI_04901 [Oryza sativa Indica Group]
Length = 589
Score = 576 bits (1484), Expect = e-161
Identities = 291/566 (51%), Positives = 398/566 (70%), Gaps = 9/566 (1%)
Frame = -1
Query: 2400 TVSHILQIHAQLITT-HLISDTFAVSRLIV-----ATTSTQQMNYAELVFMQIQKP---H 2248
+ SH LQ HA L+T+ HL + +S L++ A+ S ++A+ VF + + H
Sbjct: 22 SASHALQCHALLLTSGHLAASPARLSNLLLLALASASASPSAADHADSVFAHLAEEASRH 81
Query: 2247 AFIYNSMIRGYVESLKPRNAFEFFSRMRREAVIGDSFTYPFVLKACGLMLGVKEGGEIHG 2068
AF +N+++R + + PR + +FSRMRR AV D++T+P VLKACG G + G +HG
Sbjct: 82 AFPWNTLVRLHAAA-SPRRSLLYFSRMRRVAVAPDAYTFPAVLKACGCAPGCRVGLVVHG 140
Query: 2067 EVVKNGFELDLFVMNGLINMYCKCGEMVCAMRLFDGFKERDFVSWNTMIAGYIGYGKMDE 1888
E V+ G + DLF N LI+ YC+ G+ ++FD RD VSWN+M+AGY+G G++D
Sbjct: 141 EAVRTGLDADLFTRNALISFYCRIGDCRSGRKVFD-HGVRDLVSWNSMVAGYVGCGEVDL 199
Query: 1887 AKNLFDGMPERDLVSWTMMIDAYGKKFGYVARARELFNNMPKRDLVSWNSMISGYTHTGD 1708
A++LFD M +RD SW MID YG+ G V RARELF+ MP RDLV WNSMI GY G
Sbjct: 200 AQDLFDEMRQRDAFSWATMIDGYGEMAGGVDRARELFDQMPDRDLVCWNSMIDGYARHGR 259
Query: 1707 MVLARELFEEMAEKNVISWSIMIDGYARHGHPTEALNLFQKMLFHGIRADKVSVVGAIQS 1528
M AR LFEEM E+NVISWSI+IDGY R G P EAL FQ+ML GI+ D+V+ VGA+ +
Sbjct: 260 MDEARVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQRMLSCGIKPDRVAAVGAVAA 319
Query: 1527 CGELGALDQGRWIHVCVEKNDIICDVVVQTALLDMYMKCGRVNDAHRLFNSMLQKNFVSW 1348
C +LGAL+QGRW+H +EK ++ DVVVQTAL+DMY+KCGR++ A +F SM +K+ V+W
Sbjct: 320 CAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLDLAKLIFESMPKKSVVTW 379
Query: 1347 NVMIVGLGMNGHGNEALKLFAQMREQGILMDDLTLLGILSACNHAGLVNEGLQIFVKMEN 1168
NVMIVGLG +G+G +A+KLF QM + MDDL++L +L++C HAGLV+EGL IF +ME
Sbjct: 380 NVMIVGLGTHGYGLDAIKLFNQMETERAPMDDLSVLAVLTSCTHAGLVSEGLGIFYRMEK 439
Query: 1167 TYGIEPKVEHYSCLVDLLSRAGRIREAKTVIETFPVKADSTLWGSLLAACRTTNNLVIAE 988
G+EPKVEHY L+DLL RAGR+ +A+ IET P++ LWGSLLA+CR+ + +AE
Sbjct: 440 DLGLEPKVEHYGALIDLLGRAGRVDQARNTIETMPMEPTPELWGSLLASCRSHRCVELAE 499
Query: 987 VALERLVELKADDCGVYVLMSNIHAEKGMWEEVLSIRRLMTDRGMKKGTGRSVIEVDGAV 808
+++ERL L ADD GVYVL+SNI+A++GMW++V IR+LM+ GMKK GRSVIEVDG +
Sbjct: 500 LSVERLASLGADDSGVYVLLSNIYADEGMWDDVFRIRKLMSAEGMKKNIGRSVIEVDGQI 559
Query: 807 HEFFNGDGTLFCMKGLDVVIWSLSKM 730
HEF NG + + + + +W+LS +
Sbjct: 560 HEFVNGGSSHPHKEEIYLTLWNLSNI 585
>gb|EAZ14601.1| hypothetical protein OsJ_04525 [Oryza sativa Japonica Group]
Length = 616
Score = 572 bits (1474), Expect = e-160
Identities = 288/546 (52%), Positives = 388/546 (71%), Gaps = 9/546 (1%)
Frame = -1
Query: 2400 TVSHILQIHAQLITT-HLISDTFAVSRLIV-----ATTSTQQMNYAELVFMQIQKP---H 2248
+ SH LQ HA L+T+ HL + +S L++ A+ S ++A+ VF + + H
Sbjct: 22 SASHALQCHALLLTSGHLAASPARLSNLLLLALASASASPSAADHADSVFAHLAEEASRH 81
Query: 2247 AFIYNSMIRGYVESLKPRNAFEFFSRMRREAVIGDSFTYPFVLKACGLMLGVKEGGEIHG 2068
AF +N+++R + + PR + +FSRMRR AV D++T+P VLKACG G + G +HG
Sbjct: 82 AFPWNTLVRLHAAA-SPRRSLLYFSRMRRAAVAPDAYTFPAVLKACGCAPGCRVGLVVHG 140
Query: 2067 EVVKNGFELDLFVMNGLINMYCKCGEMVCAMRLFDGFKERDFVSWNTMIAGYIGYGKMDE 1888
E V+ G + DLF N LI+ YC+ G+ ++FD RD VSWN+M+AGY+G G++D
Sbjct: 141 EAVRTGLDADLFTRNALISFYCRIGDCRSGRKVFD-HGVRDLVSWNSMVAGYVGCGEVDL 199
Query: 1887 AKNLFDGMPERDLVSWTMMIDAYGKKFGYVARARELFNNMPKRDLVSWNSMISGYTHTGD 1708
A++LFD M +RD SW MID YG+ G V RARELF+ MP RDLV WNSMI GY G
Sbjct: 200 AQDLFDEMRQRDAFSWATMIDGYGEMAGGVDRARELFDQMPDRDLVCWNSMIDGYARHGR 259
Query: 1707 MVLARELFEEMAEKNVISWSIMIDGYARHGHPTEALNLFQKMLFHGIRADKVSVVGAIQS 1528
M AR LFEEM E+NVISWSI+IDGY R G P EAL FQ+ML GI+ D+V+ VGA+ +
Sbjct: 260 MDEARVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQRMLRCGIKPDRVAAVGAVAA 319
Query: 1527 CGELGALDQGRWIHVCVEKNDIICDVVVQTALLDMYMKCGRVNDAHRLFNSMLQKNFVSW 1348
C +LGAL+QGRW+H +EK ++ DVVVQTAL+DMY+KCGR++ A +F SM +K+ V+W
Sbjct: 320 CAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLDLAKLIFESMPKKSVVTW 379
Query: 1347 NVMIVGLGMNGHGNEALKLFAQMREQGILMDDLTLLGILSACNHAGLVNEGLQIFVKMEN 1168
NVMIVGLG +G+G +A+KLF QM + MDDL++L +L++C HAGLV+EGL IF +ME
Sbjct: 380 NVMIVGLGTHGYGLDAIKLFNQMETERAPMDDLSILAVLTSCTHAGLVSEGLGIFYRMEK 439
Query: 1167 TYGIEPKVEHYSCLVDLLSRAGRIREAKTVIETFPVKADSTLWGSLLAACRTTNNLVIAE 988
G+EPKVEHY L+DLL RAGR+ +A+ IET P++ LWGSLLA+CR+ + +AE
Sbjct: 440 DLGLEPKVEHYGALIDLLGRAGRVDQARNTIETMPMEPTPELWGSLLASCRSHRCVELAE 499
Query: 987 VALERLVELKADDCGVYVLMSNIHAEKGMWEEVLSIRRLMTDRGMKKGTGRSVIEVDGAV 808
+++ERL L ADD GVYVL+SNI+A++GMW++V IR+LM+ GMKK GRSVIEVDG +
Sbjct: 500 LSVERLASLGADDSGVYVLLSNIYADEGMWDDVFRIRKLMSAEGMKKNIGRSVIEVDGQI 559
Query: 807 HEFFNG 790
HEF NG
Sbjct: 560 HEFVNG 565