BLASTX nr result

ID: Coptis25_contig00029655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029655
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323381.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
ref|XP_002524067.1| conserved hypothetical protein [Ricinus comm...   129   3e-28
ref|XP_002263641.2| PREDICTED: trafficking protein particle comp...   126   2e-27
emb|CBI39137.3| unnamed protein product [Vitis vinifera]              126   2e-27
ref|XP_004161304.1| PREDICTED: trafficking protein particle comp...   118   5e-25

>ref|XP_002323381.1| predicted protein [Populus trichocarpa] gi|222868011|gb|EEF05142.1|
           predicted protein [Populus trichocarpa]
          Length = 521

 Score =  129 bits (325), Expect = 2e-28
 Identities = 61/82 (74%), Positives = 69/82 (84%)
 Frame = -1

Query: 286 SESQSSWFQVFNKELIHASSFLEHEAFDHPVASLLVVSSKDNEPINKFVDLFNTNQFPSL 107
           SE   SWF++FNKEL+   SF EHEAFDHPVA + VVSSKD +PINKFVDLFNTN+ PSL
Sbjct: 122 SEISPSWFEIFNKELVRTVSFSEHEAFDHPVACVSVVSSKDEQPINKFVDLFNTNKLPSL 181

Query: 106 LNNGAMDPKILKHDLLVHDN*D 41
           LN+GAMDPKILKH +LVHDN D
Sbjct: 182 LNDGAMDPKILKHYVLVHDNKD 203


>ref|XP_002524067.1| conserved hypothetical protein [Ricinus communis]
           gi|223536635|gb|EEF38277.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1284

 Score =  129 bits (323), Expect = 3e-28
 Identities = 62/82 (75%), Positives = 69/82 (84%)
 Frame = -1

Query: 286 SESQSSWFQVFNKELIHASSFLEHEAFDHPVASLLVVSSKDNEPINKFVDLFNTNQFPSL 107
           SES  SWFQ  N+EL+   SF +HEAFDHPVA LLVVSSKD +PIN+FVDLFNTN+ PSL
Sbjct: 122 SESLPSWFQFVNEELVRTVSFSDHEAFDHPVACLLVVSSKDEQPINRFVDLFNTNKLPSL 181

Query: 106 LNNGAMDPKILKHDLLVHDN*D 41
           LN+GAMDPKILKH LLVHDN D
Sbjct: 182 LNDGAMDPKILKHYLLVHDNQD 203


>ref|XP_002263641.2| PREDICTED: trafficking protein particle complex subunit 8-like
           [Vitis vinifera]
          Length = 1289

 Score =  126 bits (316), Expect = 2e-27
 Identities = 60/82 (73%), Positives = 67/82 (81%)
 Frame = -1

Query: 286 SESQSSWFQVFNKELIHASSFLEHEAFDHPVASLLVVSSKDNEPINKFVDLFNTNQFPSL 107
           SE   SWFQ FNKEL+ + SF +HEAFDHPVA LLVVS+KD  P+N+FVDLFNTNQ P L
Sbjct: 129 SEILPSWFQFFNKELVRSLSFSDHEAFDHPVACLLVVSTKDERPLNRFVDLFNTNQLPFL 188

Query: 106 LNNGAMDPKILKHDLLVHDN*D 41
           LN+G MDPKILKH LLVHDN D
Sbjct: 189 LNDGVMDPKILKHYLLVHDNQD 210


>emb|CBI39137.3| unnamed protein product [Vitis vinifera]
          Length = 1262

 Score =  126 bits (316), Expect = 2e-27
 Identities = 60/82 (73%), Positives = 67/82 (81%)
 Frame = -1

Query: 286 SESQSSWFQVFNKELIHASSFLEHEAFDHPVASLLVVSSKDNEPINKFVDLFNTNQFPSL 107
           SE   SWFQ FNKEL+ + SF +HEAFDHPVA LLVVS+KD  P+N+FVDLFNTNQ P L
Sbjct: 102 SEILPSWFQFFNKELVRSLSFSDHEAFDHPVACLLVVSTKDERPLNRFVDLFNTNQLPFL 161

Query: 106 LNNGAMDPKILKHDLLVHDN*D 41
           LN+G MDPKILKH LLVHDN D
Sbjct: 162 LNDGVMDPKILKHYLLVHDNQD 183


>ref|XP_004161304.1| PREDICTED: trafficking protein particle complex subunit 8-like
           [Cucumis sativus]
          Length = 650

 Score =  118 bits (296), Expect = 5e-25
 Identities = 56/77 (72%), Positives = 64/77 (83%)
 Frame = -1

Query: 271 SWFQVFNKELIHASSFLEHEAFDHPVASLLVVSSKDNEPINKFVDLFNTNQFPSLLNNGA 92
           SWF +FNKELI   SF EHEAFDHPVA LLVVSS+D+ PINK  DLFNT++ PSLLN+G 
Sbjct: 127 SWFHLFNKELIRNVSFSEHEAFDHPVACLLVVSSRDDHPINKLSDLFNTSKLPSLLNDGT 186

Query: 91  MDPKILKHDLLVHDN*D 41
           MDPKI+KH LL+HDN D
Sbjct: 187 MDPKIMKHYLLLHDNQD 203


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